Protein–RNA interactions for Protein: O00570

SOX1, Transcription factor SOX-1, humanhuman

Predicted RBP Predictions only

Length 391 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SOX1O00570 FSBP-203ENST00000611249 2181 ntAPPRIS P1 TSL 5 BASIC4.4□□□□□ -1.7
SOX1O00570 AC083843.3-201ENST00000623679 2186 ntBASIC4.4□□□□□ -1.7
SOX1O00570 AC139713.2-215ENST00000641428 5037 ntBASIC4.4□□□□□ -1.7
SOX1O00570 RIF1-203ENST00000428287 7722 ntAPPRIS ALT2 TSL 1 (best) BASIC4.4□□□□□ -1.7
SOX1O00570 RNU6-1020P-201ENST00000363684 107 ntBASIC4.4□□□□□ -1.71
SOX1O00570 SNORD115-32-201ENST00000364079 82 ntBASIC4.4□□□□□ -1.71
SOX1O00570 RNU6-335P-201ENST00000364563 113 ntBASIC4.4□□□□□ -1.71
SOX1O00570 RNA5SP126-201ENST00000365092 109 ntBASIC4.4□□□□□ -1.71
SOX1O00570 RFX3-203ENST00000381984 364 ntTSL 3 BASIC4.4□□□□□ -1.71
SOX1O00570 TRAJ48-201ENST00000390489 63 ntAPPRIS P1 BASIC4.4□□□□□ -1.71
SOX1O00570 MTCO1P5-201ENST00000433573 344 ntBASIC4.4□□□□□ -1.71
SOX1O00570 AL135923.2-201ENST00000435444 501 ntTSL 2 BASIC4.4□□□□□ -1.71
SOX1O00570 RPL23AP46-201ENST00000438548 490 ntBASIC4.4□□□□□ -1.71
SOX1O00570 RPS15AP7-201ENST00000439294 405 ntBASIC4.4□□□□□ -1.71
SOX1O00570 RN7SL601P-201ENST00000471221 293 ntBASIC4.4□□□□□ -1.71
SOX1O00570 AC109925.1-201ENST00000478069 331 ntBASIC4.4□□□□□ -1.71
SOX1O00570 RPL31P13-201ENST00000484151 370 ntBASIC4.4□□□□□ -1.71
SOX1O00570 RNU6-1278P-201ENST00000516130 107 ntBASIC4.4□□□□□ -1.71
SOX1O00570 RNA5SP360-201ENST00000516555 118 ntBASIC4.4□□□□□ -1.71
SOX1O00570 EIF4BP1-201ENST00000554881 351 ntBASIC4.4□□□□□ -1.71
SOX1O00570 AC104002.1-201ENST00000557025 380 ntTSL 3 BASIC4.4□□□□□ -1.71
SOX1O00570 AC026992.1-202ENST00000558454 421 ntTSL 3 BASIC4.4□□□□□ -1.71
SOX1O00570 CYCSP40-201ENST00000575927 294 ntBASIC4.4□□□□□ -1.71
SOX1O00570 AC129510.2-201ENST00000582774 345 ntTSL 5 BASIC4.4□□□□□ -1.71
SOX1O00570 ZNF432-203ENST00000597273 624 ntTSL 2 BASIC4.4□□□□□ -1.71
SOX1O00570 MIR6868-201ENST00000611215 58 ntBASIC4.4□□□□□ -1.71
SOX1O00570 MIR8058-201ENST00000615737 89 ntBASIC4.4□□□□□ -1.71
SOX1O00570 Clostridiales-1.2-201ENST00000636724 160 ntBASIC4.4□□□□□ -1.71
SOX1O00570 RPS6KA6-204ENST00000620340 8169 ntTSL 5 BASIC4.4□□□□□ -1.71
SOX1O00570 DDR2-202ENST00000367922 10160 ntAPPRIS P1 TSL 1 (best) BASIC4.4□□□□□ -1.71
SOX1O00570 AKAP4-201ENST00000358526 2881 ntTSL 1 (best) BASIC4.4□□□□□ -1.71
SOX1O00570 RNF111-212ENST00000561186 4536 ntTSL 2 BASIC4.4□□□□□ -1.71
SOX1O00570 ZFPM2-203ENST00000517361 3300 ntTSL 2 BASIC4.4□□□□□ -1.71
SOX1O00570 MS4A14-201ENST00000300187 2997 ntAPPRIS P3 TSL 1 (best) BASIC4.4□□□□□ -1.71
SOX1O00570 PATJ-202ENST00000316485 3657 ntTSL 5 BASIC4.4□□□□□ -1.71
SOX1O00570 GABRG2-214ENST00000639111 11735 ntAPPRIS P1 TSL 1 (best) BASIC4.39□□□□□ -1.71
SOX1O00570 MEG8-223ENST00000638012 3757 ntTSL 5 BASIC4.39□□□□□ -1.71
SOX1O00570 RAB23-201ENST00000317483 2546 ntAPPRIS P1 TSL 1 (best) BASIC4.39□□□□□ -1.71
SOX1O00570 SCOC-201ENST00000338517 1864 ntTSL 4 BASIC4.39□□□□□ -1.71
SOX1O00570 PTRH2-203ENST00000470557 4114 ntAPPRIS P3 BASIC4.39□□□□□ -1.71
SOX1O00570 PPP1R9A-201ENST00000289495 3983 ntTSL 1 (best) BASIC4.39□□□□□ -1.71
SOX1O00570 TLR3-201ENST00000296795 6015 ntAPPRIS P1 TSL 1 (best) BASIC4.39□□□□□ -1.71
SOX1O00570 GHR-208ENST00000612382 4699 ntAPPRIS P1 TSL 5 BASIC4.39□□□□□ -1.71
SOX1O00570 KLF12-201ENST00000377669 10637 ntAPPRIS P1 TSL 1 (best) BASIC4.39□□□□□ -1.71
SOX1O00570 LIX1-201ENST00000274382 4026 ntAPPRIS P1 TSL 1 (best) BASIC4.39□□□□□ -1.71
SOX1O00570 ZNF28-203ENST00000438150 5171 ntTSL 2 BASIC4.39□□□□□ -1.71
SOX1O00570 FLG-AS1-205ENST00000445097 2857 ntTSL 1 (best) BASIC4.39□□□□□ -1.71
SOX1O00570 RNU6-527P-201ENST00000363425 104 ntBASIC4.39□□□□□ -1.71
SOX1O00570 RNU6-879P-201ENST00000364328 108 ntBASIC4.39□□□□□ -1.71
SOX1O00570 RNU6-740P-201ENST00000364734 105 ntBASIC4.39□□□□□ -1.71
SOX1O00570 RNU6-926P-201ENST00000384075 107 ntBASIC4.39□□□□□ -1.71
SOX1O00570 RNU6-318P-201ENST00000384283 103 ntBASIC4.39□□□□□ -1.71
SOX1O00570 MIR32-201ENST00000384965 70 ntBASIC4.39□□□□□ -1.71
SOX1O00570 RPS4XP3-201ENST00000398541 413 ntBASIC4.39□□□□□ -1.71
SOX1O00570 AL031121.1-201ENST00000406553 254 ntBASIC4.39□□□□□ -1.71
SOX1O00570 EIF1AXP1-201ENST00000419267 435 ntBASIC4.39□□□□□ -1.71
SOX1O00570 AC005002.2-201ENST00000438228 269 ntBASIC4.39□□□□□ -1.71
SOX1O00570 AC006026.2-201ENST00000457376 180 ntBASIC4.39□□□□□ -1.71
SOX1O00570 RPL23AP65-201ENST00000475608 468 ntBASIC4.39□□□□□ -1.71
SOX1O00570 RPL7P47-201ENST00000497299 556 ntBASIC4.39□□□□□ -1.71
SOX1O00570 HMGB1P22-201ENST00000505315 124 ntBASIC4.39□□□□□ -1.71
SOX1O00570 AC025741.1-201ENST00000506100 544 ntTSL 4 BASIC4.39□□□□□ -1.71
SOX1O00570 AP002992.1-202ENST00000530842 551 ntTSL 2 BASIC4.39□□□□□ -1.71
SOX1O00570 AC009107.1-201ENST00000561923 330 ntTSL 3 BASIC4.39□□□□□ -1.71
SOX1O00570 AC015912.2-201ENST00000571053 181 ntBASIC4.39□□□□□ -1.71
SOX1O00570 AC015914.2-201ENST00000618167 288 ntBASIC4.39□□□□□ -1.71
SOX1O00570 U6.99-201ENST00000637524 83 ntBASIC4.39□□□□□ -1.71
SOX1O00570 ETV1-203ENST00000403527 3363 ntTSL 1 (best) BASIC4.39□□□□□ -1.71
SOX1O00570 FAN1-202ENST00000561594 2738 ntTSL 1 (best) BASIC4.39□□□□□ -1.71
SOX1O00570 SRRM1-203ENST00000447431 3691 ntAPPRIS ALT2 TSL 5 BASIC4.39□□□□□ -1.71
SOX1O00570 POU2F1-206ENST00000429375 13651 ntAPPRIS ALT2 TSL 2 BASIC4.39□□□□□ -1.71
SOX1O00570 PLAG1-201ENST00000316981 7322 ntAPPRIS P1 TSL 1 (best) BASIC4.38□□□□□ -1.71
SOX1O00570 TTC21B-AS1-201ENST00000440322 2260 ntTSL 4 BASIC4.38□□□□□ -1.71
SOX1O00570 NDST4-201ENST00000264363 3351 ntAPPRIS P1 TSL 1 (best) BASIC4.38□□□□□ -1.71
SOX1O00570 FAM133A-202ENST00000332647 3159 ntAPPRIS P1 TSL 2 BASIC4.38□□□□□ -1.71
SOX1O00570 RNU6-1286P-201ENST00000383871 107 ntBASIC4.38□□□□□ -1.71
SOX1O00570 Y_RNA.569-201ENST00000384749 103 ntBASIC4.38□□□□□ -1.71
SOX1O00570 MIR153-2-201ENST00000385225 87 ntBASIC4.38□□□□□ -1.71
SOX1O00570 RNU1-139P-201ENST00000391307 165 ntBASIC4.38□□□□□ -1.71
SOX1O00570 U3.37-201ENST00000408528 213 ntBASIC4.38□□□□□ -1.71
SOX1O00570 RNA5SP31-201ENST00000411144 127 ntBASIC4.38□□□□□ -1.71
SOX1O00570 AC004837.2-201ENST00000435766 731 ntTSL 3 BASIC4.38□□□□□ -1.71
SOX1O00570 ZIC4-AS1-201ENST00000462168 268 ntTSL 5 BASIC4.38□□□□□ -1.71
SOX1O00570 RPS29P26-201ENST00000477483 171 ntBASIC4.38□□□□□ -1.71
SOX1O00570 AC074198.2-201ENST00000508153 258 ntBASIC4.38□□□□□ -1.71
SOX1O00570 RNU6-513P-201ENST00000516104 104 ntBASIC4.38□□□□□ -1.71
SOX1O00570 AK6P2-201ENST00000549020 471 ntBASIC4.38□□□□□ -1.71
SOX1O00570 RPL21P7-201ENST00000557463 483 ntBASIC4.38□□□□□ -1.71
SOX1O00570 TRAV28-201ENST00000557548 323 ntBASIC4.38□□□□□ -1.71
SOX1O00570 AC012409.1-201ENST00000560176 358 ntTSL 3 BASIC4.38□□□□□ -1.71
SOX1O00570 MIR4782-201ENST00000577987 79 ntBASIC4.38□□□□□ -1.71
SOX1O00570 GALP-203ENST00000590002 150 ntTSL 1 (best) BASIC4.38□□□□□ -1.71
SOX1O00570 SNRPGP15-201ENST00000600149 222 ntBASIC4.38□□□□□ -1.71
SOX1O00570 AC024153.1-201ENST00000603103 365 ntBASIC4.38□□□□□ -1.71
SOX1O00570 MIR8057-201ENST00000620957 69 ntBASIC4.38□□□□□ -1.71
SOX1O00570 AL672167.1-203ENST00000641299 2975 ntBASIC4.38□□□□□ -1.71
SOX1O00570 PTPN13-202ENST00000411767 8119 ntAPPRIS ALT2 TSL 1 (best) BASIC4.38□□□□□ -1.71
SOX1O00570 CNOT4-202ENST00000356162 2594 ntTSL 5 BASIC4.38□□□□□ -1.71
SOX1O00570 TLR10-206ENST00000508334 2616 ntAPPRIS P1 TSL 1 (best) BASIC4.38□□□□□ -1.71
SOX1O00570 ATP2C1-212ENST00000507488 3579 ntAPPRIS ALT2 TSL 2 BASIC4.38□□□□□ -1.71
Retrieved 100 of 98,524 protein–RNA pairs in 116.3 ms