Protein–RNA interactions for Protein: O00337

SLC28A1, Sodium/nucleoside cotransporter 1, humanhuman

Predictions only

Length 649 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SLC28A1O00337 AL138963.2-201ENST00000605137 226 ntBASIC2.28□□□□□ -2.04
SLC28A1O00337 AC008945.2-201ENST00000606056 604 ntBASIC2.28□□□□□ -2.04
SLC28A1O00337 AC093788.1-201ENST00000609356 927 ntBASIC2.28□□□□□ -2.04
SLC28A1O00337 RMST_4.1-201ENST00000616886 107 ntBASIC2.28□□□□□ -2.04
SLC28A1O00337 MIR5739-201ENST00000619803 80 ntBASIC2.28□□□□□ -2.04
SLC28A1O00337 AC022079.1-201ENST00000621546 602 ntBASIC2.28□□□□□ -2.04
SLC28A1O00337 LINC01090-203ENST00000632331 466 ntTSL 5 BASIC2.28□□□□□ -2.04
SLC28A1O00337 ESF1-202ENST00000617257 1470 ntTSL 5 BASIC2.27□□□□□ -2.05
SLC28A1O00337 LRIF1-203ENST00000494675 1912 ntAPPRIS ALT2 TSL 2 BASIC2.27□□□□□ -2.05
SLC28A1O00337 KPNA5-202ENST00000368564 11311 ntAPPRIS P1 TSL 1 (best) BASIC2.27□□□□□ -2.05
SLC28A1O00337 RNU1-52P-201ENST00000384190 164 ntBASIC2.27□□□□□ -2.05
SLC28A1O00337 SNORD116-20-201ENST00000384529 92 ntBASIC2.27□□□□□ -2.05
SLC28A1O00337 RNU4-46P-201ENST00000410818 138 ntBASIC2.27□□□□□ -2.05
SLC28A1O00337 AC064871.1-202ENST00000413954 382 ntTSL 5 BASIC2.27□□□□□ -2.05
SLC28A1O00337 UBE2V1P10-201ENST00000414685 269 ntBASIC2.27□□□□□ -2.05
SLC28A1O00337 TTTY8-202ENST00000426035 518 ntTSL 1 (best) BASIC2.27□□□□□ -2.05
SLC28A1O00337 AL138775.1-201ENST00000429539 575 ntTSL 1 (best) BASIC2.27□□□□□ -2.05
SLC28A1O00337 UBE2E2-AS1-202ENST00000430018 499 ntTSL 2 BASIC2.27□□□□□ -2.05
SLC28A1O00337 PCYT1B-AS1-201ENST00000432626 275 ntTSL 2 BASIC2.27□□□□□ -2.05
SLC28A1O00337 MTND4P32-201ENST00000437189 1237 ntBASIC2.27□□□□□ -2.05
SLC28A1O00337 AC092802.2-202ENST00000444665 371 ntTSL 5 BASIC2.27□□□□□ -2.05
SLC28A1O00337 TTTY8B-202ENST00000455570 518 ntTSL 1 (best) BASIC2.27□□□□□ -2.05
SLC28A1O00337 MGC32805-203ENST00000506053 652 ntTSL 3 BASIC2.27□□□□□ -2.05
SLC28A1O00337 AF213884.2-201ENST00000510417 903 ntBASIC2.27□□□□□ -2.05
SLC28A1O00337 AC104136.1-201ENST00000512969 394 ntBASIC2.27□□□□□ -2.05
SLC28A1O00337 AC004054.1-201ENST00000515111 270 ntTSL 3 BASIC2.27□□□□□ -2.05
SLC28A1O00337 RNU1-104P-201ENST00000517280 175 ntBASIC2.27□□□□□ -2.05
SLC28A1O00337 CBX3P7-201ENST00000532876 502 ntBASIC2.27□□□□□ -2.05
SLC28A1O00337 AL356057.1-201ENST00000533798 831 ntBASIC2.27□□□□□ -2.05
SLC28A1O00337 AC009135.1-201ENST00000549303 776 ntTSL 2 BASIC2.27□□□□□ -2.05
SLC28A1O00337 AC009269.3-201ENST00000558429 472 ntTSL 5 BASIC2.27□□□□□ -2.05
SLC28A1O00337 MIR4319-201ENST00000577285 85 ntBASIC2.27□□□□□ -2.05
SLC28A1O00337 AC007621.1-201ENST00000604544 437 ntBASIC2.27□□□□□ -2.05
SLC28A1O00337 AC079610.3-201ENST00000606960 147 ntTSL 3 BASIC2.27□□□□□ -2.05
SLC28A1O00337 AC009233.1-201ENST00000616477 371 ntBASIC2.27□□□□□ -2.05
SLC28A1O00337 uc_338.11-201ENST00000619132 160 ntBASIC2.27□□□□□ -2.05
SLC28A1O00337 AC026585.1-201ENST00000619582 524 ntBASIC2.27□□□□□ -2.05
SLC28A1O00337 RTL4-201ENST00000340433 2613 ntAPPRIS P1 BASIC2.26□□□□□ -2.05
SLC28A1O00337 AMY2B-208ENST00000610648 1736 ntAPPRIS P1 TSL 1 (best) BASIC2.26□□□□□ -2.05
SLC28A1O00337 MIRLET7G-201ENST00000362280 84 ntBASIC2.26□□□□□ -2.05
SLC28A1O00337 RNA5SP68-201ENST00000363885 119 ntBASIC2.26□□□□□ -2.05
SLC28A1O00337 RNU6-487P-201ENST00000365430 104 ntBASIC2.26□□□□□ -2.05
SLC28A1O00337 RNU6-45P-201ENST00000384471 107 ntBASIC2.26□□□□□ -2.05
SLC28A1O00337 MORN2-203ENST00000409131 544 ntTSL 5 BASIC2.26□□□□□ -2.05
SLC28A1O00337 AL157709.1-201ENST00000412695 424 ntTSL 3 BASIC2.26□□□□□ -2.05
SLC28A1O00337 EIF4EP4-201ENST00000424916 578 ntBASIC2.26□□□□□ -2.05
SLC28A1O00337 MTCO2P11-201ENST00000431069 680 ntBASIC2.26□□□□□ -2.05
SLC28A1O00337 AC090515.1-201ENST00000465295 476 ntBASIC2.26□□□□□ -2.05
SLC28A1O00337 AC006512.1-201ENST00000468816 291 ntBASIC2.26□□□□□ -2.05
SLC28A1O00337 AC117503.1-201ENST00000472241 394 ntBASIC2.26□□□□□ -2.05
SLC28A1O00337 AC005920.2-201ENST00000509833 332 ntTSL 3 BASIC2.26□□□□□ -2.05
SLC28A1O00337 LNX1-AS1-202ENST00000510785 550 ntTSL 2 BASIC2.26□□□□□ -2.05
SLC28A1O00337 AC107222.1-201ENST00000510899 637 ntBASIC2.26□□□□□ -2.05
SLC28A1O00337 GTF2H2C-212ENST00000512736 832 ntTSL 1 (best) BASIC2.26□□□□□ -2.05
SLC28A1O00337 LINC01256-201ENST00000513270 508 ntTSL 2 BASIC2.26□□□□□ -2.05
SLC28A1O00337 RNA5SP356-201ENST00000515972 94 ntBASIC2.26□□□□□ -2.05
SLC28A1O00337 RNA5SP24-201ENST00000516478 95 ntBASIC2.26□□□□□ -2.05
SLC28A1O00337 HDAC2-AS2-206ENST00000517965 850 ntTSL 3 BASIC2.26□□□□□ -2.05
SLC28A1O00337 AC083973.1-205ENST00000518994 601 ntTSL 2 BASIC2.26□□□□□ -2.05
SLC28A1O00337 PSMA3P-201ENST00000555485 635 ntBASIC2.26□□□□□ -2.05
SLC28A1O00337 LINC01533-205ENST00000593056 607 ntTSL 3 BASIC2.26□□□□□ -2.05
SLC28A1O00337 AC073410.2-201ENST00000603240 332 ntBASIC2.26□□□□□ -2.05
SLC28A1O00337 AL033523.1-201ENST00000605153 153 ntBASIC2.26□□□□□ -2.05
SLC28A1O00337 DLEU2_1.1-201ENST00000612089 120 ntBASIC2.26□□□□□ -2.05
SLC28A1O00337 C8orf59-209ENST00000612977 586 ntAPPRIS P1 TSL 2 BASIC2.26□□□□□ -2.05
SLC28A1O00337 DLEU2_1.2-201ENST00000614667 120 ntBASIC2.26□□□□□ -2.05
SLC28A1O00337 ZNRD1-AS1_2.5-201ENST00000614729 76 ntBASIC2.26□□□□□ -2.05
SLC28A1O00337 DAOA-AS1_2.1-201ENST00000614829 187 ntBASIC2.26□□□□□ -2.05
SLC28A1O00337 MIR6817-201ENST00000615588 66 ntBASIC2.26□□□□□ -2.05
SLC28A1O00337 AC026523.1-201ENST00000617221 490 ntTSL 5 BASIC2.26□□□□□ -2.05
SLC28A1O00337 SMIM2-AS1-204ENST00000619472 746 ntTSL 3 BASIC2.26□□□□□ -2.05
SLC28A1O00337 COMMD6-213ENST00000626103 120 ntTSL 5 BASIC2.26□□□□□ -2.05
SLC28A1O00337 CD44-239ENST00000639002 528 ntTSL 1 (best) BASIC2.26□□□□□ -2.05
SLC28A1O00337 GPR22-201ENST00000304402 2942 ntAPPRIS P1 TSL 1 (best) BASIC2.25□□□□□ -2.05
SLC28A1O00337 RNU6-1010P-201ENST00000362757 107 ntBASIC2.25□□□□□ -2.05
SLC28A1O00337 RNU1-72P-201ENST00000362976 153 ntBASIC2.25□□□□□ -2.05
SLC28A1O00337 SNORA5B-201ENST00000363786 132 ntBASIC2.25□□□□□ -2.05
SLC28A1O00337 SNORA80A-201ENST00000363922 136 ntBASIC2.25□□□□□ -2.05
SLC28A1O00337 SNORA67.1-201ENST00000364749 141 ntBASIC2.25□□□□□ -2.05
SLC28A1O00337 RNU6-715P-201ENST00000365204 103 ntBASIC2.25□□□□□ -2.05
SLC28A1O00337 RNA5SP240-201ENST00000365355 128 ntBASIC2.25□□□□□ -2.05
SLC28A1O00337 SNORA75-201ENST00000384158 137 ntBASIC2.25□□□□□ -2.05
SLC28A1O00337 RNU1-57P-201ENST00000384491 166 ntBASIC2.25□□□□□ -2.05
SLC28A1O00337 RNU6-606P-201ENST00000384721 111 ntBASIC2.25□□□□□ -2.05
SLC28A1O00337 RNU2-9P-201ENST00000410194 145 ntBASIC2.25□□□□□ -2.05
SLC28A1O00337 RNU6-1140P-201ENST00000410517 106 ntBASIC2.25□□□□□ -2.05
SLC28A1O00337 RNU6-607P-201ENST00000411283 108 ntBASIC2.25□□□□□ -2.05
SLC28A1O00337 ATP13A5-AS1-201ENST00000414634 476 ntTSL 3 BASIC2.25□□□□□ -2.05
SLC28A1O00337 AC005019.2-201ENST00000434321 359 ntTSL 5 BASIC2.25□□□□□ -2.05
SLC28A1O00337 HMGB1P31-201ENST00000437242 427 ntBASIC2.25□□□□□ -2.05
SLC28A1O00337 MTND1P18-201ENST00000448191 573 ntBASIC2.25□□□□□ -2.05
SLC28A1O00337 AC132479.1-201ENST00000449160 144 ntBASIC2.25□□□□□ -2.05
SLC28A1O00337 AL139109.1-201ENST00000455491 297 ntBASIC2.25□□□□□ -2.05
SLC28A1O00337 CYP2C59P-201ENST00000457790 269 ntBASIC2.25□□□□□ -2.05
SLC28A1O00337 RPL31P3-201ENST00000458430 332 ntBASIC2.25□□□□□ -2.05
SLC28A1O00337 AC074344.1-201ENST00000512823 224 ntBASIC2.25□□□□□ -2.05
SLC28A1O00337 AC010210.1-203ENST00000513905 260 ntTSL 3 BASIC2.25□□□□□ -2.05
SLC28A1O00337 SNORA43.2-201ENST00000516652 128 ntBASIC2.25□□□□□ -2.05
SLC28A1O00337 RNU6-1178P-201ENST00000516674 107 ntBASIC2.25□□□□□ -2.05
SLC28A1O00337 FAM92A-209ENST00000519679 538 ntTSL 4 BASIC2.25□□□□□ -2.05
Retrieved 100 of 98,524 protein–RNA pairs in 105.4 ms