Protein–RNA interactions for Protein: A6NIU2

LINC01549, Putative uncharacterized protein encoded by LINC01549, humanhuman

Predictions only

Length 74 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01549A6NIU2 RFC5P1-201ENST00000454419 874 ntBASIC-0.23□□□□□ -2.45
LINC01549A6NIU2 AC233266.1-201ENST00000454518 96 ntBASIC-0.23□□□□□ -2.45
LINC01549A6NIU2 AC124854.1-202ENST00000513779 339 ntTSL 3 BASIC-0.23□□□□□ -2.45
LINC01549A6NIU2 AC109329.1-201ENST00000518744 317 ntBASIC-0.23□□□□□ -2.45
LINC01549A6NIU2 AP000889.1-201ENST00000530968 660 ntBASIC-0.23□□□□□ -2.45
LINC01549A6NIU2 AP003171.1-201ENST00000532770 266 ntTSL 2 BASIC-0.23□□□□□ -2.45
LINC01549A6NIU2 AL136520.1-202ENST00000555494 763 ntBASIC-0.23□□□□□ -2.45
LINC01549A6NIU2 AC063944.1-210ENST00000593837 519 ntTSL 5 BASIC-0.23□□□□□ -2.45
LINC01549A6NIU2 AC091152.3-201ENST00000604227 325 ntBASIC-0.23□□□□□ -2.45
LINC01549A6NIU2 RNU6-6P-201ENST00000606623 107 ntBASIC-0.23□□□□□ -2.45
LINC01549A6NIU2 AC242852.1-201ENST00000612151 96 ntBASIC-0.23□□□□□ -2.45
LINC01549A6NIU2 AC073349.3-201ENST00000617616 186 ntBASIC-0.23□□□□□ -2.45
LINC01549A6NIU2 AC244015.1-201ENST00000622301 99 ntBASIC-0.23□□□□□ -2.45
LINC01549A6NIU2 AC007792.1-201ENST00000623023 402 ntBASIC-0.23□□□□□ -2.45
LINC01549A6NIU2 RNU4-79P-201ENST00000362764 141 ntBASIC-0.24□□□□□ -2.45
LINC01549A6NIU2 Y_RNA.338-201ENST00000365320 114 ntBASIC-0.24□□□□□ -2.45
LINC01549A6NIU2 RNU6-741P-201ENST00000383889 107 ntBASIC-0.24□□□□□ -2.45
LINC01549A6NIU2 RNU6-140P-201ENST00000384566 108 ntBASIC-0.24□□□□□ -2.45
LINC01549A6NIU2 RNU6ATAC8P-201ENST00000408460 126 ntBASIC-0.24□□□□□ -2.45
LINC01549A6NIU2 AL035398.1-201ENST00000430869 322 ntBASIC-0.24□□□□□ -2.45
LINC01549A6NIU2 AL080284.1-201ENST00000434493 442 ntTSL 2 BASIC-0.24□□□□□ -2.45
LINC01549A6NIU2 AL138900.1-201ENST00000449345 399 ntTSL 3 BASIC-0.24□□□□□ -2.45
LINC01549A6NIU2 LINC01201-202ENST00000451431 401 ntTSL 3 BASIC-0.24□□□□□ -2.45
LINC01549A6NIU2 AC104073.1-201ENST00000451988 151 ntBASIC-0.24□□□□□ -2.45
LINC01549A6NIU2 AC113410.1-201ENST00000505029 247 ntBASIC-0.24□□□□□ -2.45
LINC01549A6NIU2 AC012146.1-204ENST00000570712 426 ntTSL 3 BASIC-0.24□□□□□ -2.45
LINC01549A6NIU2 AL355802.4-201ENST00000607635 548 ntBASIC-0.24□□□□□ -2.45
LINC01549A6NIU2 AL365434.2-201ENST00000607979 234 ntBASIC-0.24□□□□□ -2.45
LINC01549A6NIU2 AC018926.3-201ENST00000618841 406 ntBASIC-0.24□□□□□ -2.45
LINC01549A6NIU2 ZNF93-209ENST00000638737 1020 ntTSL 5 BASIC-0.24□□□□□ -2.45
LINC01549A6NIU2 MINPP1-204ENST00000536010 2215 ntTSL 1 (best) BASIC-0.24□□□□□ -2.45
LINC01549A6NIU2 SNORA63.3-201ENST00000362682 132 ntBASIC-0.25□□□□□ -2.45
LINC01549A6NIU2 RNU5A-1-201ENST00000362698 116 ntBASIC-0.25□□□□□ -2.45
LINC01549A6NIU2 RNU6-98P-201ENST00000384173 107 ntBASIC-0.25□□□□□ -2.45
LINC01549A6NIU2 RNU6-342P-201ENST00000384521 104 ntBASIC-0.25□□□□□ -2.45
LINC01549A6NIU2 CALM2P3-201ENST00000400429 449 ntBASIC-0.25□□□□□ -2.45
LINC01549A6NIU2 AL109924.3-201ENST00000413324 393 ntTSL 2 BASIC-0.25□□□□□ -2.45
LINC01549A6NIU2 VTA1P1-201ENST00000414044 866 ntBASIC-0.25□□□□□ -2.45
LINC01549A6NIU2 AL357833.2-201ENST00000426811 430 ntTSL 3 BASIC-0.25□□□□□ -2.45
LINC01549A6NIU2 AC093422.3-201ENST00000428506 305 ntBASIC-0.25□□□□□ -2.45
LINC01549A6NIU2 MTCO3P18-201ENST00000440206 761 ntBASIC-0.25□□□□□ -2.45
LINC01549A6NIU2 RPL30P1-201ENST00000488676 339 ntBASIC-0.25□□□□□ -2.45
LINC01549A6NIU2 MTCO3P7-201ENST00000510008 774 ntBASIC-0.25□□□□□ -2.45
LINC01549A6NIU2 AC010587.2-201ENST00000511727 448 ntBASIC-0.25□□□□□ -2.45
LINC01549A6NIU2 AP000942.2-201ENST00000526310 628 ntTSL 3 BASIC-0.25□□□□□ -2.45
LINC01549A6NIU2 TRAV32-201ENST00000553993 340 ntBASIC-0.25□□□□□ -2.45
LINC01549A6NIU2 EIF1P4-201ENST00000572664 335 ntBASIC-0.25□□□□□ -2.45
LINC01549A6NIU2 AC060771.1-201ENST00000582031 164 ntBASIC-0.25□□□□□ -2.45
LINC01549A6NIU2 AL162730.1-201ENST00000605734 292 ntBASIC-0.25□□□□□ -2.45
LINC01549A6NIU2 ST7-OT4_1.1-201ENST00000615322 200 ntBASIC-0.25□□□□□ -2.45
LINC01549A6NIU2 AC017037.3-201ENST00000625016 472 ntBASIC-0.25□□□□□ -2.45
LINC01549A6NIU2 RNA5SP264-201ENST00000363115 107 ntBASIC-0.26□□□□□ -2.45
LINC01549A6NIU2 RNU6-296P-201ENST00000384608 107 ntBASIC-0.26□□□□□ -2.45
LINC01549A6NIU2 AC119751.3-201ENST00000399720 670 ntBASIC-0.26□□□□□ -2.45
LINC01549A6NIU2 AC093639.1-201ENST00000441026 473 ntTSL 2 BASIC-0.26□□□□□ -2.45
LINC01549A6NIU2 RAD1P2-201ENST00000446414 663 ntBASIC-0.26□□□□□ -2.45
LINC01549A6NIU2 AC105758.1-201ENST00000506038 399 ntBASIC-0.26□□□□□ -2.45
LINC01549A6NIU2 AC018437.2-201ENST00000517369 389 ntTSL 5 BASIC-0.26□□□□□ -2.45
LINC01549A6NIU2 AL049870.4-201ENST00000555741 486 ntBASIC-0.26□□□□□ -2.45
LINC01549A6NIU2 AL137100.2-201ENST00000555786 315 ntBASIC-0.26□□□□□ -2.45
LINC01549A6NIU2 AL035425.2-201ENST00000563887 563 ntAPPRIS P1 TSL 4 BASIC-0.26□□□□□ -2.45
LINC01549A6NIU2 AC112191.3-201ENST00000604371 277 ntBASIC-0.26□□□□□ -2.45
LINC01549A6NIU2 NDUFA8P1-201ENST00000605525 367 ntBASIC-0.26□□□□□ -2.45
LINC01549A6NIU2 AC021851.1-201ENST00000608537 1082 ntBASIC-0.26□□□□□ -2.45
LINC01549A6NIU2 AF129408.1-201ENST00000608767 431 ntBASIC-0.26□□□□□ -2.45
LINC01549A6NIU2 MIR6718-201ENST00000616153 80 ntBASIC-0.26□□□□□ -2.45
LINC01549A6NIU2 PLD1-217ENST00000627725 174 ntTSL 5 BASIC-0.26□□□□□ -2.45
LINC01549A6NIU2 DEUP1-202ENST00000525646 1920 ntTSL 1 (best) BASIC-0.26□□□□□ -2.45
LINC01549A6NIU2 OR4P4-201ENST00000314612 939 ntAPPRIS P1 BASIC-0.27□□□□□ -2.45
LINC01549A6NIU2 SNORD114-23-201ENST00000363536 72 ntBASIC-0.27□□□□□ -2.45
LINC01549A6NIU2 RNU6-910P-201ENST00000390844 107 ntBASIC-0.27□□□□□ -2.45
LINC01549A6NIU2 NDUFS5P4-201ENST00000412983 318 ntBASIC-0.27□□□□□ -2.45
LINC01549A6NIU2 C8orf59P1-201ENST00000429930 303 ntBASIC-0.27□□□□□ -2.45
LINC01549A6NIU2 LINC01073-201ENST00000441659 149 ntTSL 3 BASIC-0.27□□□□□ -2.45
LINC01549A6NIU2 TOPORSLP1-202ENST00000469756 969 ntTSL 3 BASIC-0.27□□□□□ -2.45
LINC01549A6NIU2 RPL36AP48-201ENST00000485521 314 ntBASIC-0.27□□□□□ -2.45
LINC01549A6NIU2 LINC02484-201ENST00000513843 546 ntTSL 5 BASIC-0.27□□□□□ -2.45
LINC01549A6NIU2 SNORA25.11-201ENST00000515935 105 ntBASIC-0.27□□□□□ -2.45
LINC01549A6NIU2 SNORA31.4-201ENST00000516049 129 ntBASIC-0.27□□□□□ -2.45
LINC01549A6NIU2 AP002428.1-201ENST00000527345 380 ntTSL 3 BASIC-0.27□□□□□ -2.45
LINC01549A6NIU2 LINC02546-202ENST00000528119 801 ntTSL 5 BASIC-0.27□□□□□ -2.45
LINC01549A6NIU2 MTCO2P15-201ENST00000532655 656 ntBASIC-0.27□□□□□ -2.45
LINC01549A6NIU2 PSMA3P-201ENST00000555485 635 ntBASIC-0.27□□□□□ -2.45
LINC01549A6NIU2 ROCK1P1-201ENST00000573767 549 ntBASIC-0.27□□□□□ -2.45
LINC01549A6NIU2 AC025887.1-201ENST00000578349 264 ntTSL 3 BASIC-0.27□□□□□ -2.45
LINC01549A6NIU2 AC004160.1-210ENST00000599875 689 ntTSL 5 BASIC-0.27□□□□□ -2.45
LINC01549A6NIU2 AC008993.2-201ENST00000631744 806 ntBASIC-0.27□□□□□ -2.45
LINC01549A6NIU2 RNU1-96P-201ENST00000364163 162 ntBASIC-0.28□□□□□ -2.45
LINC01549A6NIU2 MIR514A1-201ENST00000385133 98 ntBASIC-0.28□□□□□ -2.45
LINC01549A6NIU2 AL159990.1-201ENST00000415119 337 ntTSL 3 BASIC-0.28□□□□□ -2.45
LINC01549A6NIU2 AC093019.2-201ENST00000432294 384 ntTSL 3 BASIC-0.28□□□□□ -2.45
LINC01549A6NIU2 AL159990.2-201ENST00000436491 337 ntTSL 3 BASIC-0.28□□□□□ -2.45
LINC01549A6NIU2 AL353706.1-201ENST00000436728 494 ntBASIC-0.28□□□□□ -2.45
LINC01549A6NIU2 SNRPEP9-201ENST00000436794 238 ntBASIC-0.28□□□□□ -2.45
LINC01549A6NIU2 AC073486.1-201ENST00000453278 531 ntTSL 5 BASIC-0.28□□□□□ -2.45
LINC01549A6NIU2 GUCA1C-203ENST00000471108 633 ntTSL 2 BASIC-0.28□□□□□ -2.45
LINC01549A6NIU2 AC113420.1-201ENST00000507903 571 ntBASIC-0.28□□□□□ -2.45
LINC01549A6NIU2 AP003174.2-201ENST00000544663 294 ntTSL 3 BASIC-0.28□□□□□ -2.45
LINC01549A6NIU2 OR6C7P-201ENST00000547875 934 ntBASIC-0.28□□□□□ -2.45
LINC01549A6NIU2 AL356804.1-201ENST00000553791 448 ntTSL 5 BASIC-0.28□□□□□ -2.45
Retrieved 100 of 98,524 protein–RNA pairs in 190 ms