Protein–RNA interactions for Protein: Q9P2H5

USP35, Ubiquitin carboxyl-terminal hydrolase 35, humanhuman

Predictions only

Length 1,018 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
USP35Q9P2H5 NR3C1-212ENST00000504572 3389 ntAPPRIS ALT1 TSL 1 (best) BASIC4.34□□□□□ -1.71
USP35Q9P2H5 RNU6-522P-201ENST00000364497 107 ntBASIC4.34□□□□□ -1.71
USP35Q9P2H5 U3.12-201ENST00000364498 214 ntBASIC4.34□□□□□ -1.71
USP35Q9P2H5 Y_RNA.378-201ENST00000365652 113 ntBASIC4.34□□□□□ -1.71
USP35Q9P2H5 FAM107B-204ENST00000378465 1052 ntAPPRIS P1 TSL 2 BASIC4.34□□□□□ -1.71
USP35Q9P2H5 RNU6-748P-201ENST00000384648 107 ntBASIC4.34□□□□□ -1.71
USP35Q9P2H5 RNU6-19P-201ENST00000384718 107 ntBASIC4.34□□□□□ -1.71
USP35Q9P2H5 RNA5SP219-201ENST00000390940 113 ntBASIC4.34□□□□□ -1.71
USP35Q9P2H5 AC239803.1-203ENST00000411978 452 ntTSL 2 BASIC4.34□□□□□ -1.71
USP35Q9P2H5 AL117337.1-201ENST00000412789 444 ntTSL 3 BASIC4.34□□□□□ -1.71
USP35Q9P2H5 AC079150.1-201ENST00000413043 383 ntTSL 3 BASIC4.34□□□□□ -1.71
USP35Q9P2H5 ELF3-AS1-201ENST00000415582 500 ntTSL 2 BASIC4.34□□□□□ -1.71
USP35Q9P2H5 AL139413.1-201ENST00000421309 217 ntBASIC4.34□□□□□ -1.71
USP35Q9P2H5 OOSP1P1-201ENST00000423265 274 ntBASIC4.34□□□□□ -1.71
USP35Q9P2H5 AL035258.1-201ENST00000439450 439 ntTSL 3 BASIC4.34□□□□□ -1.71
USP35Q9P2H5 RN7SL283P-201ENST00000489055 303 ntBASIC4.34□□□□□ -1.71
USP35Q9P2H5 RNA5SP356-201ENST00000515972 94 ntBASIC4.34□□□□□ -1.71
USP35Q9P2H5 SNORA14.1-201ENST00000516113 141 ntBASIC4.34□□□□□ -1.71
USP35Q9P2H5 Y_RNA.687-201ENST00000516558 91 ntBASIC4.34□□□□□ -1.71
USP35Q9P2H5 MIR2276-201ENST00000516886 89 ntBASIC4.34□□□□□ -1.71
USP35Q9P2H5 UQCRB-202ENST00000517523 515 ntTSL 2 BASIC4.34□□□□□ -1.71
USP35Q9P2H5 AP001783.1-202ENST00000534620 408 ntTSL 2 BASIC4.34□□□□□ -1.71
USP35Q9P2H5 AC026333.2-201ENST00000542164 106 ntBASIC4.34□□□□□ -1.71
USP35Q9P2H5 PSMA4-205ENST00000558281 773 ntTSL 3 BASIC4.34□□□□□ -1.71
USP35Q9P2H5 LINC02253-201ENST00000559321 448 ntTSL 2 BASIC4.34□□□□□ -1.71
USP35Q9P2H5 AC113137.1-201ENST00000591869 558 ntTSL 4 BASIC4.34□□□□□ -1.71
USP35Q9P2H5 AC092747.3-201ENST00000603769 301 ntBASIC4.34□□□□□ -1.71
USP35Q9P2H5 AP000907.4-201ENST00000604143 237 ntBASIC4.34□□□□□ -1.71
USP35Q9P2H5 NPPA-AS1_3.1-201ENST00000617059 108 ntBASIC4.34□□□□□ -1.71
USP35Q9P2H5 USP12-203ENST00000620323 349 ntTSL 3 BASIC4.34□□□□□ -1.71
USP35Q9P2H5 TAB3-203ENST00000378930 6255 ntAPPRIS P1 TSL 1 (best) BASIC4.34□□□□□ -1.71
USP35Q9P2H5 AK9-203ENST00000368948 2478 ntTSL 5 BASIC4.34□□□□□ -1.72
USP35Q9P2H5 SLC5A3-201ENST00000381151 11576 ntAPPRIS P1 TSL 1 (best) BASIC4.33□□□□□ -1.72
USP35Q9P2H5 LRRTM2-201ENST00000274711 6017 ntAPPRIS P1 TSL 1 (best) BASIC4.33□□□□□ -1.72
USP35Q9P2H5 LRIF1-203ENST00000494675 1912 ntAPPRIS ALT2 TSL 2 BASIC4.33□□□□□ -1.72
USP35Q9P2H5 RNU4-26P-201ENST00000410270 107 ntBASIC4.33□□□□□ -1.72
USP35Q9P2H5 AL365277.2-201ENST00000415255 551 ntTSL 3 BASIC4.33□□□□□ -1.72
USP35Q9P2H5 AC090952.1-201ENST00000424242 446 ntTSL 3 BASIC4.33□□□□□ -1.72
USP35Q9P2H5 RPL32P28-201ENST00000443577 397 ntBASIC4.33□□□□□ -1.72
USP35Q9P2H5 HMGN2P26-201ENST00000463169 339 ntBASIC4.33□□□□□ -1.72
USP35Q9P2H5 AC012055.2-201ENST00000504167 335 ntTSL 3 BASIC4.33□□□□□ -1.72
USP35Q9P2H5 ACA59.2-201ENST00000517061 156 ntBASIC4.33□□□□□ -1.72
USP35Q9P2H5 AC245166.1-201ENST00000521012 253 ntBASIC4.33□□□□□ -1.72
USP35Q9P2H5 AC096558.1-203ENST00000550516 574 ntTSL 3 BASIC4.33□□□□□ -1.72
USP35Q9P2H5 AP000787.2-201ENST00000604432 568 ntBASIC4.33□□□□□ -1.72
USP35Q9P2H5 AC002044.1-201ENST00000606707 158 ntBASIC4.33□□□□□ -1.72
USP35Q9P2H5 AC068944.2-201ENST00000610373 403 ntBASIC4.33□□□□□ -1.72
USP35Q9P2H5 DCAF17-212ENST00000611110 975 ntTSL 1 (best) BASIC4.33□□□□□ -1.72
USP35Q9P2H5 AC010378.1-201ENST00000619270 362 ntBASIC4.33□□□□□ -1.72
USP35Q9P2H5 RMST_7.1-201ENST00000621935 268 ntBASIC4.33□□□□□ -1.72
USP35Q9P2H5 CCSER2-201ENST00000224756 7664 ntAPPRIS P1 TSL 5 BASIC4.33□□□□□ -1.72
USP35Q9P2H5 SYNE2-212ENST00000554584 20508 ntTSL 5 BASIC4.33□□□□□ -1.72
USP35Q9P2H5 MFSD8-233ENST00000641482 4860 ntBASIC4.33□□□□□ -1.72
USP35Q9P2H5 GPRC6A-202ENST00000368549 2622 ntTSL 1 (best) BASIC4.32□□□□□ -1.72
USP35Q9P2H5 DPY19L2P1-203ENST00000458672 3347 ntTSL 1 (best) BASIC4.32□□□□□ -1.72
USP35Q9P2H5 RNU1-70P-201ENST00000362618 164 ntBASIC4.32□□□□□ -1.72
USP35Q9P2H5 RNU6-942P-201ENST00000363002 107 ntBASIC4.32□□□□□ -1.72
USP35Q9P2H5 Y_RNA.157-201ENST00000363638 102 ntBASIC4.32□□□□□ -1.72
USP35Q9P2H5 Y_RNA.167-201ENST00000363735 109 ntBASIC4.32□□□□□ -1.72
USP35Q9P2H5 Y_RNA.248-201ENST00000364501 109 ntBASIC4.32□□□□□ -1.72
USP35Q9P2H5 PIGP-205ENST00000399103 656 ntAPPRIS P1 TSL 1 (best) BASIC4.32□□□□□ -1.72
USP35Q9P2H5 AL096701.2-201ENST00000416920 238 ntBASIC4.32□□□□□ -1.72
USP35Q9P2H5 AFDN-AS1-202ENST00000417244 182 ntTSL 2 BASIC4.32□□□□□ -1.72
USP35Q9P2H5 AL353705.1-201ENST00000433468 480 ntBASIC4.32□□□□□ -1.72
USP35Q9P2H5 RPL23AP58-201ENST00000440453 469 ntBASIC4.32□□□□□ -1.72
USP35Q9P2H5 AL441985.1-201ENST00000457727 251 ntBASIC4.32□□□□□ -1.72
USP35Q9P2H5 snoU109.2-201ENST00000459316 135 ntBASIC4.32□□□□□ -1.72
USP35Q9P2H5 LINC00971-201ENST00000482721 535 ntTSL 2 BASIC4.32□□□□□ -1.72
USP35Q9P2H5 SCARNA11.3-201ENST00000517276 130 ntBASIC4.32□□□□□ -1.72
USP35Q9P2H5 GTF3AP2-201ENST00000557014 266 ntBASIC4.32□□□□□ -1.72
USP35Q9P2H5 AC020895.1-201ENST00000595362 272 ntBASIC4.32□□□□□ -1.72
USP35Q9P2H5 AC024153.1-201ENST00000603103 365 ntBASIC4.32□□□□□ -1.72
USP35Q9P2H5 AL359757.2-201ENST00000624309 274 ntBASIC4.32□□□□□ -1.72
USP35Q9P2H5 PTP4A2-220ENST00000627328 615 ntTSL 5 BASIC4.32□□□□□ -1.72
USP35Q9P2H5 AC073476.4-201ENST00000628409 72 ntBASIC4.32□□□□□ -1.72
USP35Q9P2H5 MIR3662-201ENST00000637030 95 ntBASIC4.32□□□□□ -1.72
USP35Q9P2H5 AC008264.2-201ENST00000610193 3731 ntBASIC4.32□□□□□ -1.72
USP35Q9P2H5 EIF4E2P1-201ENST00000393781 255 ntBASIC4.31□□□□□ -1.72
USP35Q9P2H5 AC005062.1-207ENST00000418442 587 ntTSL 3 BASIC4.31□□□□□ -1.72
USP35Q9P2H5 ACTR3BP6-201ENST00000422332 1241 ntBASIC4.31□□□□□ -1.72
USP35Q9P2H5 AC006333.1-201ENST00000422401 410 ntTSL 3 BASIC4.31□□□□□ -1.72
USP35Q9P2H5 AC020743.3-201ENST00000440351 360 ntTSL 3 BASIC4.31□□□□□ -1.72
USP35Q9P2H5 AC234781.5-202ENST00000453508 426 ntTSL 3 BASIC4.31□□□□□ -1.72
USP35Q9P2H5 LINC01774-201ENST00000453569 595 ntTSL 2 BASIC4.31□□□□□ -1.72
USP35Q9P2H5 ITCH-AS1-201ENST00000454205 299 ntTSL 5 BASIC4.31□□□□□ -1.72
USP35Q9P2H5 LINC01997-201ENST00000494900 429 ntTSL 2 BASIC4.31□□□□□ -1.72
USP35Q9P2H5 RNU6-1038P-201ENST00000516516 104 ntBASIC4.31□□□□□ -1.72
USP35Q9P2H5 TRIQK-207ENST00000519069 598 ntTSL 4 BASIC4.31□□□□□ -1.72
USP35Q9P2H5 AP000873.2-206ENST00000529811 429 ntTSL 2 BASIC4.31□□□□□ -1.72
USP35Q9P2H5 AC023050.3-201ENST00000541142 333 ntBASIC4.31□□□□□ -1.72
USP35Q9P2H5 CR383656.8-201ENST00000549046 145 ntBASIC4.31□□□□□ -1.72
USP35Q9P2H5 LINC02301-203ENST00000555798 789 ntTSL 3 BASIC4.31□□□□□ -1.72
USP35Q9P2H5 EGLN3-AS1-201ENST00000555922 308 ntTSL 3 BASIC4.31□□□□□ -1.72
USP35Q9P2H5 AC009271.1-202ENST00000588803 492 ntTSL 3 BASIC4.31□□□□□ -1.72
USP35Q9P2H5 AC010620.2-201ENST00000600135 313 ntBASIC4.31□□□□□ -1.72
USP35Q9P2H5 AL020991.1-201ENST00000612314 373 ntBASIC4.31□□□□□ -1.72
USP35Q9P2H5 ROCK2-203ENST00000401753 4017 ntTSL 1 (best) BASIC4.3□□□□□ -1.72
USP35Q9P2H5 ZNF85-203ENST00000345030 1689 ntAPPRIS ALT2 TSL 5 BASIC4.3□□□□□ -1.72
USP35Q9P2H5 CUL2-206ENST00000421317 2376 ntTSL 2 BASIC4.3□□□□□ -1.72
USP35Q9P2H5 Y_RNA.100-201ENST00000363141 102 ntBASIC4.3□□□□□ -1.72
Retrieved 100 of 98,524 protein–RNA pairs in 108 ms