Protein–RNA interactions for Protein: Q9HCX3

ZNF304, Zinc finger protein 304, humanhuman

Predictions only

Length 659 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ZNF304Q9HCX3 OOSP2-203ENST00000532905 496 ntAPPRIS ALT2 TSL 3 BASIC3.13□□□□□ -1.91
ZNF304Q9HCX3 HIGD1AP1-201ENST00000550979 275 ntBASIC3.13□□□□□ -1.91
ZNF304Q9HCX3 MIR5680-201ENST00000577577 84 ntBASIC3.13□□□□□ -1.91
ZNF304Q9HCX3 AP001496.1-201ENST00000579113 471 ntTSL 4 BASIC3.13□□□□□ -1.91
ZNF304Q9HCX3 AC023043.2-201ENST00000589678 1026 ntBASIC3.13□□□□□ -1.91
ZNF304Q9HCX3 AC020895.1-201ENST00000595362 272 ntBASIC3.13□□□□□ -1.91
ZNF304Q9HCX3 ATG5-207ENST00000613993 733 ntTSL 1 (best) BASIC3.13□□□□□ -1.91
ZNF304Q9HCX3 FAM157A-202ENST00000615155 405 ntBASIC3.13□□□□□ -1.91
ZNF304Q9HCX3 uc_338.15-201ENST00000615470 191 ntBASIC3.13□□□□□ -1.91
ZNF304Q9HCX3 MIR7112-201ENST00000616126 65 ntBASIC3.13□□□□□ -1.91
ZNF304Q9HCX3 RMST_7.1-201ENST00000621935 268 ntBASIC3.13□□□□□ -1.91
ZNF304Q9HCX3 CLOCK-201ENST00000309964 10304 ntAPPRIS P1 TSL 1 (best) BASIC3.13□□□□□ -1.91
ZNF304Q9HCX3 ROCK2-203ENST00000401753 4017 ntTSL 1 (best) BASIC3.13□□□□□ -1.91
ZNF304Q9HCX3 NBPF20-201ENST00000369373 18760 ntAPPRIS ALT2 TSL 5 BASIC3.13□□□□□ -1.91
ZNF304Q9HCX3 PHF6-205ENST00000625464 4434 ntAPPRIS ALT1 TSL 5 BASIC3.12□□□□□ -1.91
ZNF304Q9HCX3 IL1RL1-204ENST00000409584 2693 ntTSL 5 BASIC3.12□□□□□ -1.91
ZNF304Q9HCX3 CACNB4-238ENST00000636901 7706 ntTSL 5 BASIC3.12□□□□□ -1.91
ZNF304Q9HCX3 MT-ND4L-201ENST00000361335 297 ntAPPRIS P1 BASIC3.12□□□□□ -1.91
ZNF304Q9HCX3 RNU6-1252P-201ENST00000363054 104 ntBASIC3.12□□□□□ -1.91
ZNF304Q9HCX3 Y_RNA.135-201ENST00000363439 95 ntBASIC3.12□□□□□ -1.91
ZNF304Q9HCX3 GSTA3-202ENST00000370968 775 ntTSL 1 (best) BASIC3.12□□□□□ -1.91
ZNF304Q9HCX3 Y_RNA.474-201ENST00000384341 102 ntBASIC3.12□□□□□ -1.91
ZNF304Q9HCX3 SNORA40C-201ENST00000391285 128 ntBASIC3.12□□□□□ -1.91
ZNF304Q9HCX3 RPS4XP3-201ENST00000398541 413 ntBASIC3.12□□□□□ -1.91
ZNF304Q9HCX3 AC009411.1-202ENST00000412424 548 ntTSL 4 BASIC3.12□□□□□ -1.91
ZNF304Q9HCX3 RPL23AP82-202ENST00000427528 469 ntBASIC3.12□□□□□ -1.91
ZNF304Q9HCX3 CENPBD1P1-201ENST00000464061 469 ntBASIC3.12□□□□□ -1.91
ZNF304Q9HCX3 AC011005.2-201ENST00000487324 359 ntBASIC3.12□□□□□ -1.91
ZNF304Q9HCX3 PLCXD2-AS1-201ENST00000493131 491 ntTSL 3 BASIC3.12□□□□□ -1.91
ZNF304Q9HCX3 AC139453.3-201ENST00000493276 369 ntBASIC3.12□□□□□ -1.91
ZNF304Q9HCX3 AC096736.2-201ENST00000507972 175 ntTSL 3 BASIC3.12□□□□□ -1.91
ZNF304Q9HCX3 RNU1-86P-201ENST00000516108 154 ntBASIC3.12□□□□□ -1.91
ZNF304Q9HCX3 MIR892C-201ENST00000516410 77 ntBASIC3.12□□□□□ -1.91
ZNF304Q9HCX3 RNU1-107P-201ENST00000516617 154 ntBASIC3.12□□□□□ -1.91
ZNF304Q9HCX3 RNU6-566P-201ENST00000516790 107 ntBASIC3.12□□□□□ -1.91
ZNF304Q9HCX3 AC069113.1-201ENST00000517763 267 ntBASIC3.12□□□□□ -1.91
ZNF304Q9HCX3 AC136777.1-201ENST00000517765 369 ntTSL 4 BASIC3.12□□□□□ -1.91
ZNF304Q9HCX3 AC025871.1-201ENST00000523935 443 ntTSL 2 BASIC3.12□□□□□ -1.91
ZNF304Q9HCX3 AC005476.1-201ENST00000554427 397 ntBASIC3.12□□□□□ -1.91
ZNF304Q9HCX3 AMZ2P1-203ENST00000565833 850 ntBASIC3.12□□□□□ -1.91
ZNF304Q9HCX3 AC002044.1-201ENST00000606707 158 ntBASIC3.12□□□□□ -1.91
ZNF304Q9HCX3 AL157817.1-201ENST00000614264 790 ntBASIC3.12□□□□□ -1.91
ZNF304Q9HCX3 AL138726.1-201ENST00000614873 333 ntBASIC3.12□□□□□ -1.91
ZNF304Q9HCX3 MIR3651-201ENST00000630427 90 ntBASIC3.12□□□□□ -1.91
ZNF304Q9HCX3 SNX10-209ENST00000619420 2361 ntAPPRIS ALT1 TSL 5 BASIC3.12□□□□□ -1.91
ZNF304Q9HCX3 OR4M1-202ENST00000641200 3493 ntAPPRIS P1 BASIC3.12□□□□□ -1.91
ZNF304Q9HCX3 NBPF20-202ENST00000392971 18450 ntAPPRIS P2 TSL 5 BASIC3.12□□□□□ -1.91
ZNF304Q9HCX3 PTBP2-211ENST00000609116 12014 ntAPPRIS ALT1 TSL 1 (best) BASIC3.12□□□□□ -1.91
ZNF304Q9HCX3 HDX-201ENST00000297977 6200 ntAPPRIS P1 TSL 1 (best) BASIC3.12□□□□□ -1.91
ZNF304Q9HCX3 KNL1-202ENST00000399668 7607 ntAPPRIS ALT2 TSL 1 (best) BASIC3.12□□□□□ -1.91
ZNF304Q9HCX3 DNAH12-208ENST00000495027 12146 ntAPPRIS P1 TSL 5 BASIC3.11□□□□□ -1.91
ZNF304Q9HCX3 LCOR-205ENST00000421806 16004 ntTSL 3 BASIC3.11□□□□□ -1.91
ZNF304Q9HCX3 RGS22-214ENST00000523287 4033 ntAPPRIS ALT2 TSL 2 BASIC3.11□□□□□ -1.91
ZNF304Q9HCX3 AGR3-201ENST00000310398 749 ntAPPRIS P1 TSL 1 (best) BASIC3.11□□□□□ -1.91
ZNF304Q9HCX3 Y_RNA.339-201ENST00000365325 102 ntBASIC3.11□□□□□ -1.91
ZNF304Q9HCX3 SNORD116-11-201ENST00000383882 92 ntBASIC3.11□□□□□ -1.91
ZNF304Q9HCX3 RNU6-128P-201ENST00000383976 107 ntBASIC3.11□□□□□ -1.91
ZNF304Q9HCX3 SNORA9-201ENST00000384215 133 ntBASIC3.11□□□□□ -1.91
ZNF304Q9HCX3 BX679664.1-201ENST00000434429 253 ntBASIC3.11□□□□□ -1.91
ZNF304Q9HCX3 AC244505.4-201ENST00000434905 287 ntBASIC3.11□□□□□ -1.91
ZNF304Q9HCX3 SSXP5-201ENST00000443473 287 ntBASIC3.11□□□□□ -1.91
ZNF304Q9HCX3 RPL32P28-201ENST00000443577 397 ntBASIC3.11□□□□□ -1.91
ZNF304Q9HCX3 AL031183.1-201ENST00000457667 207 ntBASIC3.11□□□□□ -1.91
ZNF304Q9HCX3 RPS4XP2-201ENST00000458402 793 ntBASIC3.11□□□□□ -1.91
ZNF304Q9HCX3 SEM1P1-201ENST00000506694 209 ntBASIC3.11□□□□□ -1.91
ZNF304Q9HCX3 RNU6-703P-201ENST00000516946 107 ntBASIC3.11□□□□□ -1.91
ZNF304Q9HCX3 PKIA-203ENST00000518467 588 ntAPPRIS P1 TSL 1 (best) BASIC3.11□□□□□ -1.91
ZNF304Q9HCX3 MIR4719-201ENST00000585233 84 ntBASIC3.11□□□□□ -1.91
ZNF304Q9HCX3 IGKV1OR2-6-201ENST00000603485 277 ntBASIC3.11□□□□□ -1.91
ZNF304Q9HCX3 AL512625.3-207ENST00000609749 477 ntTSL 3 BASIC3.11□□□□□ -1.91
ZNF304Q9HCX3 uc_338.1-201ENST00000612113 180 ntBASIC3.11□□□□□ -1.91
ZNF304Q9HCX3 U2.21-201ENST00000637295 81 ntBASIC3.11□□□□□ -1.91
ZNF304Q9HCX3 NEB-220ENST00000618972 26307 ntAPPRIS ALT2 TSL 5 BASIC3.11□□□□□ -1.91
ZNF304Q9HCX3 MARCH7-202ENST00000409175 2402 ntAPPRIS P1 TSL 2 BASIC3.11□□□□□ -1.91
ZNF304Q9HCX3 ANKAR-209ENST00000520309 4410 ntAPPRIS P1 TSL 5 BASIC3.1□□□□□ -1.91
ZNF304Q9HCX3 ZNF626-204ENST00000612591 4404 ntAPPRIS P1 TSL 5 BASIC3.1□□□□□ -1.91
ZNF304Q9HCX3 AC108750.1-201ENST00000637986 2706 ntAPPRIS P1 TSL 4 BASIC3.1□□□□□ -1.91
ZNF304Q9HCX3 LIPI-203ENST00000536861 1529 ntAPPRIS ALT2 TSL 1 (best) BASIC3.1□□□□□ -1.91
ZNF304Q9HCX3 FIGNL1-212ENST00000613602 3187 ntAPPRIS P1 TSL 5 BASIC3.1□□□□□ -1.91
ZNF304Q9HCX3 NEBL-202ENST00000377122 9216 ntTSL 1 (best) BASIC3.1□□□□□ -1.91
ZNF304Q9HCX3 RNU6-384P-201ENST00000364900 104 ntBASIC3.1□□□□□ -1.91
ZNF304Q9HCX3 Y_RNA.324-201ENST00000365165 102 ntBASIC3.1□□□□□ -1.91
ZNF304Q9HCX3 SPRR2E-201ENST00000368750 678 ntAPPRIS P1 TSL 1 (best) BASIC3.1□□□□□ -1.91
ZNF304Q9HCX3 AP002088.1-201ENST00000382740 395 ntBASIC3.1□□□□□ -1.91
ZNF304Q9HCX3 RNU6-1035P-201ENST00000384477 107 ntBASIC3.1□□□□□ -1.91
ZNF304Q9HCX3 Y_RNA.535-201ENST00000384612 99 ntBASIC3.1□□□□□ -1.91
ZNF304Q9HCX3 TRAJ40-201ENST00000390497 61 ntAPPRIS P1 BASIC3.1□□□□□ -1.91
ZNF304Q9HCX3 AL360182.1-201ENST00000397433 468 ntBASIC3.1□□□□□ -1.91
ZNF304Q9HCX3 AL357075.1-201ENST00000404107 726 ntBASIC3.1□□□□□ -1.91
ZNF304Q9HCX3 MIR548K-201ENST00000408406 116 ntBASIC3.1□□□□□ -1.91
ZNF304Q9HCX3 RNU4-47P-201ENST00000410876 114 ntBASIC3.1□□□□□ -1.91
ZNF304Q9HCX3 RNU6-55P-201ENST00000411092 107 ntBASIC3.1□□□□□ -1.91
ZNF304Q9HCX3 Y_RNA.623-201ENST00000411128 95 ntBASIC3.1□□□□□ -1.91
ZNF304Q9HCX3 RNU6-954P-201ENST00000411355 107 ntBASIC3.1□□□□□ -1.91
ZNF304Q9HCX3 AL592148.1-201ENST00000413568 445 ntBASIC3.1□□□□□ -1.91
ZNF304Q9HCX3 AL365277.2-201ENST00000415255 551 ntTSL 3 BASIC3.1□□□□□ -1.91
ZNF304Q9HCX3 ELF3-AS1-201ENST00000415582 500 ntTSL 2 BASIC3.1□□□□□ -1.91
ZNF304Q9HCX3 AC017074.1-201ENST00000424612 561 ntTSL 3 BASIC3.1□□□□□ -1.91
ZNF304Q9HCX3 AC098614.2-201ENST00000426040 255 ntBASIC3.1□□□□□ -1.91
ZNF304Q9HCX3 AC007271.1-201ENST00000428188 382 ntTSL 3 BASIC3.1□□□□□ -1.91
Retrieved 100 of 98,524 protein–RNA pairs in 75.4 ms