Protein–RNA interactions for Protein: Q9HCU0

CD248, Endosialin, humanhuman

Predictions only

Length 757 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CD248Q9HCU0 SYNE1-201ENST00000341594 26584 ntAPPRIS ALT2 TSL 5 BASIC3.95□□□□□ -1.78
CD248Q9HCU0 MS4A1-212ENST00000534668 3475 ntAPPRIS P1 TSL 2 BASIC3.95□□□□□ -1.78
CD248Q9HCU0 RNF111-206ENST00000559209 5278 ntTSL 1 (best) BASIC3.95□□□□□ -1.78
CD248Q9HCU0 PP2D1-202ENST00000389050 2151 ntAPPRIS P1 TSL 5 BASIC3.95□□□□□ -1.78
CD248Q9HCU0 PGGT1B-203ENST00000419445 9545 ntAPPRIS P1 TSL 1 (best) BASIC3.94□□□□□ -1.78
CD248Q9HCU0 CCDC30-212ENST00000507855 2445 ntAPPRIS ALT2 TSL 1 (best) BASIC3.94□□□□□ -1.78
CD248Q9HCU0 WDR72-201ENST00000360509 5887 ntAPPRIS P2 TSL 1 (best) BASIC3.94□□□□□ -1.78
CD248Q9HCU0 NCOA1-202ENST00000348332 6895 ntAPPRIS P4 TSL 1 (best) BASIC3.94□□□□□ -1.78
CD248Q9HCU0 USH2A-201ENST00000307340 18883 ntAPPRIS P1 TSL 1 (best) BASIC3.94□□□□□ -1.78
CD248Q9HCU0 Y_RNA.64-201ENST00000362845 102 ntBASIC3.94□□□□□ -1.78
CD248Q9HCU0 Y_RNA.151-201ENST00000363566 112 ntBASIC3.94□□□□□ -1.78
CD248Q9HCU0 SNORD46.1-201ENST00000364139 104 ntBASIC3.94□□□□□ -1.78
CD248Q9HCU0 RNA5SP387-201ENST00000364226 106 ntBASIC3.94□□□□□ -1.78
CD248Q9HCU0 RNU4-42P-201ENST00000364738 142 ntBASIC3.94□□□□□ -1.78
CD248Q9HCU0 LINC00862-202ENST00000367356 759 ntTSL 3 BASIC3.94□□□□□ -1.78
CD248Q9HCU0 Y_RNA.551-201ENST00000384661 102 ntBASIC3.94□□□□□ -1.78
CD248Q9HCU0 Y_RNA.577-201ENST00000384794 101 ntBASIC3.94□□□□□ -1.78
CD248Q9HCU0 AC010745.2-201ENST00000420404 839 ntTSL 3 BASIC3.94□□□□□ -1.78
CD248Q9HCU0 AL590135.1-201ENST00000422215 156 ntBASIC3.94□□□□□ -1.78
CD248Q9HCU0 AL158071.1-201ENST00000430315 461 ntBASIC3.94□□□□□ -1.78
CD248Q9HCU0 AL451129.1-201ENST00000437471 285 ntTSL 3 BASIC3.94□□□□□ -1.78
CD248Q9HCU0 AL031274.1-201ENST00000450334 232 ntBASIC3.94□□□□□ -1.78
CD248Q9HCU0 PRSS3P4-201ENST00000453323 162 ntBASIC3.94□□□□□ -1.78
CD248Q9HCU0 AC092422.1-201ENST00000455576 584 ntTSL 4 BASIC3.94□□□□□ -1.78
CD248Q9HCU0 ODF2L-216ENST00000486215 311 ntTSL 2 BASIC3.94□□□□□ -1.78
CD248Q9HCU0 SNORA40.15-201ENST00000516884 107 ntBASIC3.94□□□□□ -1.78
CD248Q9HCU0 NDUFB9P3-201ENST00000521269 501 ntBASIC3.94□□□□□ -1.78
CD248Q9HCU0 AC022690.2-201ENST00000525673 589 ntTSL 3 BASIC3.94□□□□□ -1.78
CD248Q9HCU0 AC103796.1-201ENST00000530663 358 ntTSL 1 (best) BASIC3.94□□□□□ -1.78
CD248Q9HCU0 LINC01919-202ENST00000579506 384 ntTSL 3 BASIC3.94□□□□□ -1.78
CD248Q9HCU0 AC087749.2-201ENST00000583910 352 ntTSL 5 BASIC3.94□□□□□ -1.78
CD248Q9HCU0 AC027045.1-201ENST00000609065 202 ntTSL 5 BASIC3.94□□□□□ -1.78
CD248Q9HCU0 TUG1_2.1-201ENST00000614234 87 ntBASIC3.94□□□□□ -1.78
CD248Q9HCU0 AL360181.4-201ENST00000621752 134 ntBASIC3.94□□□□□ -1.78
CD248Q9HCU0 AC245427.9-201ENST00000633713 53 ntAPPRIS P1 BASIC3.94□□□□□ -1.78
CD248Q9HCU0 AL512643.1-201ENST00000635735 524 ntBASIC3.94□□□□□ -1.78
CD248Q9HCU0 KERA-201ENST00000266719 2162 ntAPPRIS P1 TSL 1 (best) BASIC3.94□□□□□ -1.78
CD248Q9HCU0 C1orf141-202ENST00000371006 2053 ntAPPRIS P3 TSL 2 BASIC3.94□□□□□ -1.78
CD248Q9HCU0 HSPA8P4-201ENST00000511877 1920 ntBASIC3.93□□□□□ -1.78
CD248Q9HCU0 C5orf42-205ENST00000508244 11062 ntAPPRIS P2 TSL 5 BASIC3.93□□□□□ -1.78
CD248Q9HCU0 CHM-205ENST00000615443 2821 ntTSL 1 (best) BASIC3.93□□□□□ -1.78
CD248Q9HCU0 AC138393.1-203ENST00000327086 343 ntBASIC3.93□□□□□ -1.78
CD248Q9HCU0 Y_RNA.26-201ENST00000362539 101 ntBASIC3.93□□□□□ -1.78
CD248Q9HCU0 Y_RNA.526-201ENST00000384572 110 ntBASIC3.93□□□□□ -1.78
CD248Q9HCU0 Y_RNA.555-201ENST00000384673 110 ntBASIC3.93□□□□□ -1.78
CD248Q9HCU0 MIR199A2-201ENST00000385289 110 ntBASIC3.93□□□□□ -1.78
CD248Q9HCU0 AL445529.1-201ENST00000398713 389 ntBASIC3.93□□□□□ -1.78
CD248Q9HCU0 PPP3R1-202ENST00000409377 684 ntTSL 3 BASIC3.93□□□□□ -1.78
CD248Q9HCU0 RNU6-1156P-201ENST00000410365 100 ntBASIC3.93□□□□□ -1.78
CD248Q9HCU0 AL137014.1-201ENST00000420490 1226 ntBASIC3.93□□□□□ -1.78
CD248Q9HCU0 AL139247.1-201ENST00000422768 325 ntBASIC3.93□□□□□ -1.78
CD248Q9HCU0 AL591419.1-201ENST00000427423 339 ntBASIC3.93□□□□□ -1.78
CD248Q9HCU0 AL392103.1-201ENST00000447000 198 ntBASIC3.93□□□□□ -1.78
CD248Q9HCU0 GAPDHP27-201ENST00000447427 1020 ntBASIC3.93□□□□□ -1.78
CD248Q9HCU0 AC007967.1-201ENST00000455422 1159 ntBASIC3.93□□□□□ -1.78
CD248Q9HCU0 AL136097.2-201ENST00000457003 333 ntTSL 2 BASIC3.93□□□□□ -1.78
CD248Q9HCU0 AC010631.1-201ENST00000474150 156 ntBASIC3.93□□□□□ -1.78
CD248Q9HCU0 UBE2Q2P9-201ENST00000490086 202 ntBASIC3.93□□□□□ -1.78
CD248Q9HCU0 LINC01846-201ENST00000505908 651 ntTSL 5 BASIC3.93□□□□□ -1.78
CD248Q9HCU0 RN7SKP83-201ENST00000516512 178 ntBASIC3.93□□□□□ -1.78
CD248Q9HCU0 Y_RNA.689-201ENST00000516589 107 ntBASIC3.93□□□□□ -1.78
CD248Q9HCU0 RAC1P9-201ENST00000604990 392 ntBASIC3.93□□□□□ -1.78
CD248Q9HCU0 RNU1-30P-201ENST00000606575 163 ntBASIC3.93□□□□□ -1.78
CD248Q9HCU0 AL110115.1-201ENST00000614396 364 ntBASIC3.93□□□□□ -1.78
CD248Q9HCU0 SDR42E1P2-201ENST00000614861 481 ntBASIC3.93□□□□□ -1.78
CD248Q9HCU0 SDR42E1P4-201ENST00000620894 481 ntBASIC3.93□□□□□ -1.78
CD248Q9HCU0 AC010733.2-201ENST00000589496 5702 ntBASIC3.93□□□□□ -1.78
CD248Q9HCU0 TUG1-201ENST00000519077 5673 ntTSL 1 (best) BASIC3.93□□□□□ -1.78
CD248Q9HCU0 SYNE2-202ENST00000344113 21777 ntAPPRIS ALT2 TSL 1 (best) BASIC3.93□□□□□ -1.78
CD248Q9HCU0 ZBTB37-201ENST00000367701 19128 ntAPPRIS P1 TSL 1 (best) BASIC3.92□□□□□ -1.78
CD248Q9HCU0 STXBP4-201ENST00000376352 15590 ntAPPRIS P1 TSL 2 BASIC3.92□□□□□ -1.78
CD248Q9HCU0 DDX10P1-201ENST00000448545 1933 ntBASIC3.92□□□□□ -1.78
CD248Q9HCU0 PRRG1-202ENST00000449135 4481 ntAPPRIS P1 TSL 1 (best) BASIC3.92□□□□□ -1.78
CD248Q9HCU0 Y_RNA.19-201ENST00000362462 99 ntBASIC3.92□□□□□ -1.78
CD248Q9HCU0 RNU6-989P-201ENST00000362756 107 ntBASIC3.92□□□□□ -1.78
CD248Q9HCU0 RNU6-770P-201ENST00000363929 105 ntBASIC3.92□□□□□ -1.78
CD248Q9HCU0 RNU6-806P-201ENST00000365147 105 ntBASIC3.92□□□□□ -1.78
CD248Q9HCU0 RNU6-190P-201ENST00000384154 102 ntBASIC3.92□□□□□ -1.78
CD248Q9HCU0 Y_RNA.785-201ENST00000384290 109 ntBASIC3.92□□□□□ -1.78
CD248Q9HCU0 AL138885.1-201ENST00000405921 675 ntBASIC3.92□□□□□ -1.78
CD248Q9HCU0 BX276092.3-201ENST00000424182 230 ntBASIC3.92□□□□□ -1.78
CD248Q9HCU0 AL353997.1-201ENST00000432936 108 ntBASIC3.92□□□□□ -1.78
CD248Q9HCU0 AL162389.1-201ENST00000449233 177 ntBASIC3.92□□□□□ -1.78
CD248Q9HCU0 AC234775.1-201ENST00000454247 670 ntBASIC3.92□□□□□ -1.78
CD248Q9HCU0 RPL23AP31-201ENST00000456160 467 ntBASIC3.92□□□□□ -1.78
CD248Q9HCU0 RNU7-138P-201ENST00000459479 64 ntBASIC3.92□□□□□ -1.78
CD248Q9HCU0 RNU6-111P-201ENST00000517179 105 ntBASIC3.92□□□□□ -1.78
CD248Q9HCU0 AC090124.1-201ENST00000525097 448 ntTSL 3 BASIC3.92□□□□□ -1.78
CD248Q9HCU0 AC073655.2-202ENST00000547927 401 ntTSL 3 BASIC3.92□□□□□ -1.78
CD248Q9HCU0 AC006600.1-201ENST00000572529 153 ntBASIC3.92□□□□□ -1.78
CD248Q9HCU0 MIR3944-201ENST00000581277 108 ntBASIC3.92□□□□□ -1.78
CD248Q9HCU0 AC104534.1-201ENST00000594558 566 ntTSL 4 BASIC3.92□□□□□ -1.78
CD248Q9HCU0 AC174048.1-201ENST00000603389 144 ntBASIC3.92□□□□□ -1.78
CD248Q9HCU0 ELOCP5-201ENST00000604924 333 ntBASIC3.92□□□□□ -1.78
CD248Q9HCU0 AC005344.1-201ENST00000613391 459 ntBASIC3.92□□□□□ -1.78
CD248Q9HCU0 AL034408.1-202ENST00000636088 415 ntBASIC3.92□□□□□ -1.78
CD248Q9HCU0 EPS15-202ENST00000371730 4736 ntAPPRIS ALT2 TSL 1 (best) BASIC3.92□□□□□ -1.78
CD248Q9HCU0 RNFT1-201ENST00000305783 2101 ntAPPRIS P1 TSL 1 (best) BASIC3.92□□□□□ -1.78
CD248Q9HCU0 AGTR1-206ENST00000474935 1795 ntAPPRIS P1 TSL 3 BASIC3.91□□□□□ -1.78
CD248Q9HCU0 KCNJ16-203ENST00000392671 3981 ntAPPRIS P1 TSL 2 BASIC3.91□□□□□ -1.78
Retrieved 100 of 98,524 protein–RNA pairs in 216.2 ms