Protein–RNA interactions for Protein: Q9H9S3

SEC61A2, Protein transport protein Sec61 subunit alpha isoform 2, humanhuman

Predictions only

Length 476 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SEC61A2Q9H9S3 AC116563.1-201ENST00000505454 396 ntTSL 3 BASIC3.6□□□□□ -1.83
SEC61A2Q9H9S3 SCARNA15.2-201ENST00000516409 127 ntBASIC3.6□□□□□ -1.83
SEC61A2Q9H9S3 RN7SKP272-201ENST00000516988 232 ntBASIC3.6□□□□□ -1.83
SEC61A2Q9H9S3 AC068880.3-201ENST00000519185 179 ntTSL 5 BASIC3.6□□□□□ -1.83
SEC61A2Q9H9S3 AC091144.1-201ENST00000519573 138 ntBASIC3.6□□□□□ -1.83
SEC61A2Q9H9S3 THEM7P-202ENST00000525689 764 ntTSL 3 BASIC3.6□□□□□ -1.83
SEC61A2Q9H9S3 AC021713.1-201ENST00000526554 510 ntTSL 1 (best) BASIC3.6□□□□□ -1.83
SEC61A2Q9H9S3 AC084816.1-207ENST00000538317 584 ntTSL 4 BASIC3.6□□□□□ -1.83
SEC61A2Q9H9S3 AC004024.1-201ENST00000549244 247 ntBASIC3.6□□□□□ -1.83
SEC61A2Q9H9S3 AC021979.1-201ENST00000553822 336 ntTSL 3 BASIC3.6□□□□□ -1.83
SEC61A2Q9H9S3 MED28P6-201ENST00000558776 231 ntBASIC3.6□□□□□ -1.83
SEC61A2Q9H9S3 AC215217.1-201ENST00000562162 347 ntTSL 3 BASIC3.6□□□□□ -1.83
SEC61A2Q9H9S3 AC004792.1-201ENST00000614523 137 ntBASIC3.6□□□□□ -1.83
SEC61A2Q9H9S3 AC004825.2-201ENST00000616634 455 ntBASIC3.6□□□□□ -1.83
SEC61A2Q9H9S3 FTX_2.1-201ENST00000618816 94 ntBASIC3.6□□□□□ -1.83
SEC61A2Q9H9S3 AC068631.1-219ENST00000625826 668 ntTSL 5 BASIC3.6□□□□□ -1.83
SEC61A2Q9H9S3 AL773545.4-201ENST00000637262 310 ntBASIC3.6□□□□□ -1.83
SEC61A2Q9H9S3 AL807742.1-203ENST00000637444 759 ntTSL 5 BASIC3.6□□□□□ -1.83
SEC61A2Q9H9S3 MIR492-201ENST00000638676 116 ntBASIC3.6□□□□□ -1.83
SEC61A2Q9H9S3 AL513478.4-201ENST00000641636 310 ntBASIC3.6□□□□□ -1.83
SEC61A2Q9H9S3 CRB1-201ENST00000367397 9023 ntTSL 2 BASIC3.6□□□□□ -1.83
SEC61A2Q9H9S3 AL158064.1-201ENST00000627044 2242 ntTSL 4 BASIC3.6□□□□□ -1.83
SEC61A2Q9H9S3 RGPD4-201ENST00000408999 5464 ntAPPRIS P1 TSL 1 (best) BASIC3.6□□□□□ -1.83
SEC61A2Q9H9S3 SEL1L2-202ENST00000378072 1892 ntTSL 2 BASIC3.6□□□□□ -1.83
SEC61A2Q9H9S3 ERBIN-214ENST00000511297 4257 ntAPPRIS ALT1 TSL 5 BASIC3.59□□□□□ -1.83
SEC61A2Q9H9S3 AC004925.1-201ENST00000624256 2706 ntBASIC3.59□□□□□ -1.83
SEC61A2Q9H9S3 PSG1-205ENST00000595124 1692 ntTSL 2 BASIC3.59□□□□□ -1.83
SEC61A2Q9H9S3 KIAA1107-203ENST00000637221 4337 ntTSL 1 (best) BASIC3.59□□□□□ -1.83
SEC61A2Q9H9S3 SPRR2C-201ENST00000290702 219 ntBASIC3.59□□□□□ -1.83
SEC61A2Q9H9S3 MIR335-201ENST00000362173 94 ntBASIC3.59□□□□□ -1.83
SEC61A2Q9H9S3 MIR423-201ENST00000362201 94 ntBASIC3.59□□□□□ -1.83
SEC61A2Q9H9S3 Y_RNA.270-201ENST00000364693 104 ntBASIC3.59□□□□□ -1.83
SEC61A2Q9H9S3 Y_RNA.352-201ENST00000365439 102 ntBASIC3.59□□□□□ -1.83
SEC61A2Q9H9S3 GTSF1L-202ENST00000373005 459 ntAPPRIS ALT2 TSL 3 BASIC3.59□□□□□ -1.83
SEC61A2Q9H9S3 Y_RNA.602-201ENST00000410535 92 ntBASIC3.59□□□□□ -1.83
SEC61A2Q9H9S3 HSPE1P12-201ENST00000412576 301 ntBASIC3.59□□□□□ -1.83
SEC61A2Q9H9S3 AL591043.1-201ENST00000432461 424 ntBASIC3.59□□□□□ -1.83
SEC61A2Q9H9S3 AL136369.1-201ENST00000437825 244 ntTSL 5 BASIC3.59□□□□□ -1.83
SEC61A2Q9H9S3 KC877373.1-201ENST00000479066 408 ntBASIC3.59□□□□□ -1.83
SEC61A2Q9H9S3 AC092059.1-201ENST00000485347 429 ntTSL 3 BASIC3.59□□□□□ -1.83
SEC61A2Q9H9S3 ZCCHC10-206ENST00000509008 608 ntAPPRIS ALT2 TSL 2 BASIC3.59□□□□□ -1.83
SEC61A2Q9H9S3 RNU6-1338P-201ENST00000516328 91 ntBASIC3.59□□□□□ -1.83
SEC61A2Q9H9S3 RNU6-406P-201ENST00000516470 107 ntBASIC3.59□□□□□ -1.83
SEC61A2Q9H9S3 RNU5B-3P-201ENST00000516601 115 ntBASIC3.59□□□□□ -1.83
SEC61A2Q9H9S3 RNU6-572P-201ENST00000516724 80 ntBASIC3.59□□□□□ -1.83
SEC61A2Q9H9S3 Y_RNA.706-201ENST00000516933 99 ntBASIC3.59□□□□□ -1.83
SEC61A2Q9H9S3 AC109479.2-201ENST00000517842 174 ntBASIC3.59□□□□□ -1.83
SEC61A2Q9H9S3 AC027801.4-201ENST00000518420 395 ntTSL 5 BASIC3.59□□□□□ -1.83
SEC61A2Q9H9S3 AC068992.1-201ENST00000521411 543 ntTSL 5 BASIC3.59□□□□□ -1.83
SEC61A2Q9H9S3 GNRHR2P1-201ENST00000555315 631 ntBASIC3.59□□□□□ -1.83
SEC61A2Q9H9S3 MIR5684-201ENST00000585074 65 ntBASIC3.59□□□□□ -1.83
SEC61A2Q9H9S3 RNA5SP196-201ENST00000625967 102 ntBASIC3.59□□□□□ -1.83
SEC61A2Q9H9S3 PRPSAP2-229ENST00000628609 192 ntTSL 5 BASIC3.59□□□□□ -1.83
SEC61A2Q9H9S3 AC243829.7-201ENST00000633081 225 ntBASIC3.59□□□□□ -1.83
SEC61A2Q9H9S3 LRIF1-203ENST00000494675 1912 ntAPPRIS ALT2 TSL 2 BASIC3.59□□□□□ -1.83
SEC61A2Q9H9S3 ADAT2-203ENST00000606514 6651 ntTSL 1 (best) BASIC3.59□□□□□ -1.83
SEC61A2Q9H9S3 ERBIN-203ENST00000380938 4701 ntTSL 2 BASIC3.59□□□□□ -1.83
SEC61A2Q9H9S3 WNK3-205ENST00000620763 5400 ntTSL 5 BASIC3.59□□□□□ -1.84
SEC61A2Q9H9S3 ANO3-204ENST00000531568 3117 ntAPPRIS ALT2 TSL 2 BASIC3.59□□□□□ -1.84
SEC61A2Q9H9S3 ZNF616-201ENST00000330123 2563 ntTSL 1 (best) BASIC3.58□□□□□ -1.84
SEC61A2Q9H9S3 KIF21A-203ENST00000541463 4866 ntTSL 1 (best) BASIC3.58□□□□□ -1.84
SEC61A2Q9H9S3 RNU6-1266P-201ENST00000362794 105 ntBASIC3.58□□□□□ -1.84
SEC61A2Q9H9S3 RNU6-227P-201ENST00000362865 103 ntBASIC3.58□□□□□ -1.84
SEC61A2Q9H9S3 RNU6-166P-201ENST00000384371 107 ntBASIC3.58□□□□□ -1.84
SEC61A2Q9H9S3 SNORA19-201ENST00000384737 128 ntBASIC3.58□□□□□ -1.84
SEC61A2Q9H9S3 MIR34A-201ENST00000385130 110 ntBASIC3.58□□□□□ -1.84
SEC61A2Q9H9S3 RPL21P65-201ENST00000406094 466 ntBASIC3.58□□□□□ -1.84
SEC61A2Q9H9S3 TMEM167AP1-201ENST00000423409 219 ntBASIC3.58□□□□□ -1.84
SEC61A2Q9H9S3 RPL27AP8-201ENST00000424277 446 ntBASIC3.58□□□□□ -1.84
SEC61A2Q9H9S3 AL353680.1-201ENST00000433788 337 ntTSL 3 BASIC3.58□□□□□ -1.84
SEC61A2Q9H9S3 AC004837.2-201ENST00000435766 731 ntTSL 3 BASIC3.58□□□□□ -1.84
SEC61A2Q9H9S3 AL356535.1-201ENST00000440335 398 ntBASIC3.58□□□□□ -1.84
SEC61A2Q9H9S3 PTP4A2-203ENST00000470404 575 ntTSL 3 BASIC3.58□□□□□ -1.84
SEC61A2Q9H9S3 RPS20P22-201ENST00000473700 357 ntBASIC3.58□□□□□ -1.84
SEC61A2Q9H9S3 BTBD11-206ENST00000494235 811 ntTSL 2 BASIC3.58□□□□□ -1.84
SEC61A2Q9H9S3 AL359273.1-201ENST00000510918 627 ntBASIC3.58□□□□□ -1.84
SEC61A2Q9H9S3 RNU7-175P-201ENST00000515915 61 ntBASIC3.58□□□□□ -1.84
SEC61A2Q9H9S3 RNA5SP165-201ENST00000517142 115 ntBASIC3.58□□□□□ -1.84
SEC61A2Q9H9S3 AC005476.1-201ENST00000554427 397 ntBASIC3.58□□□□□ -1.84
SEC61A2Q9H9S3 AC007224.1-201ENST00000564410 144 ntBASIC3.58□□□□□ -1.84
SEC61A2Q9H9S3 AC023824.2-201ENST00000566185 400 ntBASIC3.58□□□□□ -1.84
SEC61A2Q9H9S3 AL645944.1-201ENST00000603857 493 ntBASIC3.58□□□□□ -1.84
SEC61A2Q9H9S3 AC073657.2-201ENST00000605661 303 ntBASIC3.58□□□□□ -1.84
SEC61A2Q9H9S3 LINC00310-206ENST00000609947 892 ntTSL 5 BASIC3.58□□□□□ -1.84
SEC61A2Q9H9S3 MIR486-1-201ENST00000612171 68 ntBASIC3.58□□□□□ -1.84
SEC61A2Q9H9S3 AC011476.5-201ENST00000615594 130 ntBASIC3.58□□□□□ -1.84
SEC61A2Q9H9S3 UBE2E2-207ENST00000628311 267 ntTSL 5 BASIC3.58□□□□□ -1.84
SEC61A2Q9H9S3 hsa-mir-4536-1.1-201ENST00000636519 88 ntBASIC3.58□□□□□ -1.84
SEC61A2Q9H9S3 MUC19-205ENST00000454784 24775 ntTSL 5 BASIC3.58□□□□□ -1.84
SEC61A2Q9H9S3 SETDB2-202ENST00000317257 5619 ntAPPRIS ALT2 TSL 1 (best) BASIC3.58□□□□□ -1.84
SEC61A2Q9H9S3 PHC3-215ENST00000495893 12666 ntAPPRIS P1 TSL 1 (best) BASIC3.58□□□□□ -1.84
SEC61A2Q9H9S3 TMEM67-202ENST00000409623 3255 ntTSL 2 BASIC3.58□□□□□ -1.84
SEC61A2Q9H9S3 DST-201ENST00000244364 16742 ntTSL 1 (best) BASIC3.58□□□□□ -1.84
SEC61A2Q9H9S3 DTWD2-201ENST00000304058 4365 ntTSL 1 (best) BASIC3.58□□□□□ -1.84
SEC61A2Q9H9S3 AL139811.1-201ENST00000424779 2299 ntBASIC3.58□□□□□ -1.84
SEC61A2Q9H9S3 AC008725.1-201ENST00000605123 2263 ntBASIC3.58□□□□□ -1.84
SEC61A2Q9H9S3 AC011604.2-202ENST00000540229 2451 ntAPPRIS P5 TSL 2 BASIC3.58□□□□□ -1.84
SEC61A2Q9H9S3 FAM111B-202ENST00000411426 3344 ntTSL 4 BASIC3.57□□□□□ -1.84
SEC61A2Q9H9S3 ZNF479-201ENST00000319636 1811 ntAPPRIS P1 TSL 1 (best) BASIC3.57□□□□□ -1.84
SEC61A2Q9H9S3 ZCCHC7-202ENST00000336755 2619 ntAPPRIS P1 TSL 2 BASIC3.57□□□□□ -1.84
Retrieved 100 of 98,524 protein–RNA pairs in 100.2 ms