Protein–RNA interactions for Protein: Q9H094

NBPF3, Neuroblastoma breakpoint family member 3, humanhuman

Predictions only

Length 633 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NBPF3Q9H094 SLC4A10-206ENST00000446997 5551 ntAPPRIS P4 TSL 1 (best) BASIC5.65□□□□□ -1.51
NBPF3Q9H094 LINC02389-201ENST00000535058 3546 ntTSL 2 BASIC5.65□□□□□ -1.51
NBPF3Q9H094 NEAT1-202ENST00000501122 22743 ntBASIC5.65□□□□□ -1.51
NBPF3Q9H094 KRR1-201ENST00000229214 10118 ntAPPRIS P1 TSL 1 (best) BASIC5.65□□□□□ -1.51
NBPF3Q9H094 GABRA1-220ENST00000638159 4088 ntTSL 5 BASIC5.64□□□□□ -1.51
NBPF3Q9H094 ZNF644-212ENST00000621077 2056 ntTSL 5 BASIC5.64□□□□□ -1.51
NBPF3Q9H094 WDR63-203ENST00000370596 2905 ntAPPRIS ALT2 TSL 5 BASIC5.64□□□□□ -1.51
NBPF3Q9H094 Y_RNA.24-201ENST00000362508 103 ntBASIC5.64□□□□□ -1.51
NBPF3Q9H094 SNORA57.1-201ENST00000391227 145 ntBASIC5.64□□□□□ -1.51
NBPF3Q9H094 BX510359.2-201ENST00000417920 305 ntBASIC5.64□□□□□ -1.51
NBPF3Q9H094 CYCSP49-201ENST00000420810 319 ntBASIC5.64□□□□□ -1.51
NBPF3Q9H094 RPS27AP12-201ENST00000429552 465 ntBASIC5.64□□□□□ -1.51
NBPF3Q9H094 AL356421.2-201ENST00000446733 197 ntTSL 3 BASIC5.64□□□□□ -1.51
NBPF3Q9H094 IGHVIII-2-1-201ENST00000518843 291 ntBASIC5.64□□□□□ -1.51
NBPF3Q9H094 AP002833.1-201ENST00000530572 566 ntTSL 3 BASIC5.64□□□□□ -1.51
NBPF3Q9H094 AC010999.1-201ENST00000611856 324 ntBASIC5.64□□□□□ -1.51
NBPF3Q9H094 AC013791.1-201ENST00000616619 62 ntBASIC5.64□□□□□ -1.51
NBPF3Q9H094 MIR6853-201ENST00000619642 74 ntBASIC5.64□□□□□ -1.51
NBPF3Q9H094 PLEKHG7-201ENST00000344636 3868 ntTSL 5 BASIC5.64□□□□□ -1.51
NBPF3Q9H094 LINC01684-201ENST00000415182 2176 ntTSL 1 (best) BASIC5.64□□□□□ -1.51
NBPF3Q9H094 CPNE8-202ENST00000360449 1757 ntAPPRIS ALT2 TSL 2 BASIC5.64□□□□□ -1.51
NBPF3Q9H094 EMSY-204ENST00000524490 4015 ntTSL 2 BASIC5.64□□□□□ -1.51
NBPF3Q9H094 KCNJ16-204ENST00000585558 4014 ntTSL 1 (best) BASIC5.64□□□□□ -1.51
NBPF3Q9H094 KIF23-206ENST00000558585 2296 ntTSL 2 BASIC5.64□□□□□ -1.51
NBPF3Q9H094 ZBTB21-201ENST00000310826 7449 ntAPPRIS P1 TSL 1 (best) BASIC5.64□□□□□ -1.51
NBPF3Q9H094 OR2L3-202ENST00000641161 2830 ntAPPRIS P1 BASIC5.64□□□□□ -1.51
NBPF3Q9H094 KLRA1P-203ENST00000535939 2353 ntTSL 1 (best) BASIC5.64□□□□□ -1.51
NBPF3Q9H094 PRUNE2-207ENST00000428286 12437 ntTSL 5 BASIC5.64□□□□□ -1.51
NBPF3Q9H094 AC010132.3-201ENST00000442788 2430 ntAPPRIS P5 TSL 5 BASIC5.64□□□□□ -1.51
NBPF3Q9H094 LIX1-201ENST00000274382 4026 ntAPPRIS P1 TSL 1 (best) BASIC5.64□□□□□ -1.51
NBPF3Q9H094 XIRP2-207ENST00000628543 12182 ntTSL 5 BASIC5.64□□□□□ -1.51
NBPF3Q9H094 AL499616.1-201ENST00000415437 2633 ntTSL 2 BASIC5.63□□□□□ -1.51
NBPF3Q9H094 ZFX-203ENST00000379177 7558 ntAPPRIS P1 TSL 1 (best) BASIC5.63□□□□□ -1.51
NBPF3Q9H094 CEP83-202ENST00000397807 2737 ntTSL 5 BASIC5.63□□□□□ -1.51
NBPF3Q9H094 OBSCN-210ENST00000570156 26925 ntAPPRIS P1 TSL 5 BASIC5.63□□□□□ -1.51
NBPF3Q9H094 ATP2C1-205ENST00000504381 3498 ntTSL 2 BASIC5.63□□□□□ -1.51
NBPF3Q9H094 LINC01938-201ENST00000521341 1864 ntTSL 2 BASIC5.63□□□□□ -1.51
NBPF3Q9H094 AL590240.1-201ENST00000334118 313 ntBASIC5.63□□□□□ -1.51
NBPF3Q9H094 RNU6-1249P-201ENST00000363237 111 ntBASIC5.63□□□□□ -1.51
NBPF3Q9H094 RNU6-873P-201ENST00000363833 107 ntBASIC5.63□□□□□ -1.51
NBPF3Q9H094 RNU6-801P-201ENST00000364087 105 ntBASIC5.63□□□□□ -1.51
NBPF3Q9H094 MIR23B-201ENST00000384832 97 ntBASIC5.63□□□□□ -1.51
NBPF3Q9H094 SNORA26.5-201ENST00000391215 123 ntBASIC5.63□□□□□ -1.51
NBPF3Q9H094 AL590762.2-201ENST00000395798 571 ntBASIC5.63□□□□□ -1.51
NBPF3Q9H094 DEFB130A-201ENST00000400079 240 ntAPPRIS P1 TSL 1 (best) BASIC5.63□□□□□ -1.51
NBPF3Q9H094 AL591034.1-201ENST00000407447 340 ntBASIC5.63□□□□□ -1.51
NBPF3Q9H094 DEFB130B-201ENST00000437818 240 ntAPPRIS P1 TSL 1 (best) BASIC5.63□□□□□ -1.51
NBPF3Q9H094 AL691497.1-201ENST00000443270 449 ntTSL 2 BASIC5.63□□□□□ -1.51
NBPF3Q9H094 HSPE1P13-201ENST00000451143 297 ntBASIC5.63□□□□□ -1.51
NBPF3Q9H094 AL049874.1-201ENST00000489560 388 ntBASIC5.63□□□□□ -1.51
NBPF3Q9H094 AC090985.1-201ENST00000554440 480 ntTSL 2 BASIC5.63□□□□□ -1.51
NBPF3Q9H094 AC007347.1-201ENST00000563879 281 ntTSL 3 BASIC5.63□□□□□ -1.51
NBPF3Q9H094 ZNF560-201ENST00000301480 2654 ntAPPRIS P1 TSL 1 (best) BASIC5.63□□□□□ -1.51
NBPF3Q9H094 SGIP1-204ENST00000371039 4080 ntAPPRIS ALT2 TSL 1 (best) BASIC5.63□□□□□ -1.51
NBPF3Q9H094 DOCK7-211ENST00000634264 6303 ntAPPRIS ALT2 TSL 5 BASIC5.63□□□□□ -1.51
NBPF3Q9H094 SPART-202ENST00000438666 4789 ntAPPRIS P1 TSL 1 (best) BASIC5.63□□□□□ -1.51
NBPF3Q9H094 ORC4-216ENST00000540442 6472 ntTSL 2 BASIC5.63□□□□□ -1.51
NBPF3Q9H094 FAP-203ENST00000443424 2598 ntTSL 2 BASIC5.62□□□□□ -1.51
NBPF3Q9H094 PCDH15-214ENST00000395446 3948 ntTSL 5 BASIC5.62□□□□□ -1.51
NBPF3Q9H094 PP2D1-202ENST00000389050 2151 ntAPPRIS P1 TSL 5 BASIC5.62□□□□□ -1.51
NBPF3Q9H094 AC116096.1-201ENST00000566804 2314 ntBASIC5.62□□□□□ -1.51
NBPF3Q9H094 RPGRIP1L-201ENST00000262135 8195 ntAPPRIS P3 TSL 5 BASIC5.62□□□□□ -1.51
NBPF3Q9H094 TECRL-201ENST00000381210 3573 ntAPPRIS P1 TSL 1 (best) BASIC5.62□□□□□ -1.51
NBPF3Q9H094 RNU6-137P-201ENST00000363680 108 ntBASIC5.62□□□□□ -1.51
NBPF3Q9H094 RNU6-1164P-201ENST00000364428 107 ntBASIC5.62□□□□□ -1.51
NBPF3Q9H094 Y_RNA.521-201ENST00000384560 114 ntBASIC5.62□□□□□ -1.51
NBPF3Q9H094 MIR548A3-201ENST00000385297 97 ntBASIC5.62□□□□□ -1.51
NBPF3Q9H094 U3.19-201ENST00000390893 196 ntBASIC5.62□□□□□ -1.51
NBPF3Q9H094 RPL26P27-201ENST00000414397 437 ntBASIC5.62□□□□□ -1.51
NBPF3Q9H094 AC091390.3-201ENST00000426478 338 ntBASIC5.62□□□□□ -1.51
NBPF3Q9H094 AL135790.2-201ENST00000437701 267 ntBASIC5.62□□□□□ -1.51
NBPF3Q9H094 AC114501.3-201ENST00000453648 164 ntTSL 5 BASIC5.62□□□□□ -1.51
NBPF3Q9H094 AL355922.1-201ENST00000555624 337 ntTSL 3 BASIC5.62□□□□□ -1.51
NBPF3Q9H094 UBE2Q2P8-201ENST00000560644 102 ntBASIC5.62□□□□□ -1.51
NBPF3Q9H094 AL078604.3-201ENST00000615580 211 ntBASIC5.62□□□□□ -1.51
NBPF3Q9H094 PSMD5-AS1-215ENST00000640622 205 ntBASIC5.62□□□□□ -1.51
NBPF3Q9H094 GHR-202ENST00000357703 4316 ntTSL 5 BASIC5.62□□□□□ -1.51
NBPF3Q9H094 WDR17-204ENST00000507824 4119 ntTSL 5 BASIC5.62□□□□□ -1.51
NBPF3Q9H094 FTX-210ENST00000603037 8347 ntTSL 5 BASIC5.61□□□□□ -1.51
NBPF3Q9H094 PCDH15-212ENST00000395442 2970 ntTSL 5 BASIC5.61□□□□□ -1.51
NBPF3Q9H094 RASA1-203ENST00000506290 3009 ntAPPRIS ALT2 TSL 2 BASIC5.61□□□□□ -1.51
NBPF3Q9H094 LDHAL6CP-202ENST00000550738 3224 ntBASIC5.61□□□□□ -1.51
NBPF3Q9H094 RNU6-527P-201ENST00000363425 104 ntBASIC5.61□□□□□ -1.51
NBPF3Q9H094 RNU6-905P-201ENST00000384434 107 ntBASIC5.61□□□□□ -1.51
NBPF3Q9H094 MIR616-201ENST00000385293 97 ntBASIC5.61□□□□□ -1.51
NBPF3Q9H094 RNU2-54P-201ENST00000410299 190 ntBASIC5.61□□□□□ -1.51
NBPF3Q9H094 RPL23AP1-201ENST00000428990 471 ntBASIC5.61□□□□□ -1.51
NBPF3Q9H094 DHX9P1-201ENST00000436565 3076 ntBASIC5.61□□□□□ -1.51
NBPF3Q9H094 AL139383.1-203ENST00000445227 420 ntTSL 3 BASIC5.61□□□□□ -1.51
NBPF3Q9H094 ZNF845-201ENST00000458035 4311 ntAPPRIS P1 TSL 4 BASIC5.61□□□□□ -1.51
NBPF3Q9H094 AC092798.1-201ENST00000458542 409 ntBASIC5.61□□□□□ -1.51
NBPF3Q9H094 RN7SL604P-201ENST00000492589 296 ntBASIC5.61□□□□□ -1.51
NBPF3Q9H094 AC139453.3-201ENST00000493276 369 ntBASIC5.61□□□□□ -1.51
NBPF3Q9H094 AC055733.2-201ENST00000504737 340 ntTSL 2 BASIC5.61□□□□□ -1.51
NBPF3Q9H094 AC113383.1-204ENST00000507060 552 ntTSL 3 BASIC5.61□□□□□ -1.51
NBPF3Q9H094 RDH10-AS1-201ENST00000514599 3261 ntTSL 2 BASIC5.61□□□□□ -1.51
NBPF3Q9H094 RNU6-561P-201ENST00000516222 102 ntBASIC5.61□□□□□ -1.51
NBPF3Q9H094 RNA5SP464-201ENST00000516251 108 ntBASIC5.61□□□□□ -1.51
NBPF3Q9H094 NECAB1-202ENST00000521366 2908 ntTSL 1 (best) BASIC5.61□□□□□ -1.51
NBPF3Q9H094 AL359237.1-202ENST00000556168 487 ntTSL 5 BASIC5.61□□□□□ -1.51
Retrieved 100 of 98,524 protein–RNA pairs in 102.8 ms