Protein–RNA interactions for Protein: Q9BXS0

COL25A1, Collagen alpha-1(XXV) chain, humanhuman

Predicted RBP Predictions only

Length 654 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL25A1Q9BXS0 MIR128-1-201ENST00000384921 82 ntBASIC4.67□□□□□ -1.66
COL25A1Q9BXS0 U3.26-201ENST00000391236 204 ntBASIC4.67□□□□□ -1.66
COL25A1Q9BXS0 MTHFD2P2-201ENST00000407725 247 ntBASIC4.67□□□□□ -1.66
COL25A1Q9BXS0 RNU6ATAC19P-201ENST00000408096 110 ntBASIC4.67□□□□□ -1.66
COL25A1Q9BXS0 RNU6-588P-201ENST00000410281 105 ntBASIC4.67□□□□□ -1.66
COL25A1Q9BXS0 AL139383.1-203ENST00000445227 420 ntTSL 3 BASIC4.67□□□□□ -1.66
COL25A1Q9BXS0 AC105398.1-201ENST00000446073 402 ntTSL 5 BASIC4.67□□□□□ -1.66
COL25A1Q9BXS0 RNU6-453P-201ENST00000516819 85 ntBASIC4.67□□□□□ -1.66
COL25A1Q9BXS0 RNU6-762P-201ENST00000517107 102 ntBASIC4.67□□□□□ -1.66
COL25A1Q9BXS0 RNU6-58P-201ENST00000517143 103 ntBASIC4.67□□□□□ -1.66
COL25A1Q9BXS0 RN7SKP57-201ENST00000517248 293 ntBASIC4.67□□□□□ -1.66
COL25A1Q9BXS0 AC005868.1-201ENST00000536421 331 ntBASIC4.67□□□□□ -1.66
COL25A1Q9BXS0 SLC14A2-AS1-204ENST00000592899 359 ntTSL 3 BASIC4.67□□□□□ -1.66
COL25A1Q9BXS0 SMAD5-AS1_2.1-201ENST00000617906 131 ntBASIC4.67□□□□□ -1.66
COL25A1Q9BXS0 PTCD2-202ENST00000380639 11151 ntAPPRIS P1 TSL 5 BASIC4.67□□□□□ -1.66
COL25A1Q9BXS0 DLG1-217ENST00000452595 3053 ntTSL 2 BASIC4.67□□□□□ -1.66
COL25A1Q9BXS0 RGS17-202ENST00000367225 7773 ntAPPRIS P1 TSL 1 (best) BASIC4.67□□□□□ -1.66
COL25A1Q9BXS0 PLCXD3-201ENST00000328457 7538 ntAPPRIS P1 TSL 5 BASIC4.67□□□□□ -1.66
COL25A1Q9BXS0 CNGA1-201ENST00000358519 2627 ntAPPRIS P3 TSL 1 (best) BASIC4.67□□□□□ -1.66
COL25A1Q9BXS0 PCDH15-227ENST00000614895 9249 ntAPPRIS ALT2 TSL 5 BASIC4.67□□□□□ -1.66
COL25A1Q9BXS0 CACNB4-221ENST00000636130 7748 ntTSL 5 BASIC4.67□□□□□ -1.66
COL25A1Q9BXS0 WAC-221ENST00000628285 2740 ntTSL 1 (best) BASIC4.66□□□□□ -1.66
COL25A1Q9BXS0 LINC02431-201ENST00000503929 3601 ntTSL 1 (best) BASIC4.66□□□□□ -1.66
COL25A1Q9BXS0 SLC25A17-202ENST00000402844 2405 ntTSL 2 BASIC4.66□□□□□ -1.66
COL25A1Q9BXS0 PPP1R12A-204ENST00000546369 2977 ntTSL 2 BASIC4.66□□□□□ -1.66
COL25A1Q9BXS0 LINC00240-204ENST00000607607 5607 ntTSL 1 (best) BASIC4.66□□□□□ -1.66
COL25A1Q9BXS0 FGD4-213ENST00000546442 3503 ntTSL 5 BASIC4.66□□□□□ -1.66
COL25A1Q9BXS0 CDR1-201ENST00000370532 2467 ntAPPRIS P1 BASIC4.66□□□□□ -1.66
COL25A1Q9BXS0 AC007750.1-202ENST00000418968 4098 ntTSL 5 BASIC4.66□□□□□ -1.66
COL25A1Q9BXS0 AC069528.2-201ENST00000624849 1991 ntBASIC4.66□□□□□ -1.66
COL25A1Q9BXS0 ZNF26-201ENST00000328654 17601 ntAPPRIS P3 TSL 1 (best) BASIC4.66□□□□□ -1.66
COL25A1Q9BXS0 RNU4-10P-201ENST00000364383 140 ntBASIC4.66□□□□□ -1.66
COL25A1Q9BXS0 SNORA5.1-201ENST00000384275 131 ntBASIC4.66□□□□□ -1.66
COL25A1Q9BXS0 MIR888-201ENST00000401186 77 ntBASIC4.66□□□□□ -1.66
COL25A1Q9BXS0 GNG5P5-201ENST00000420444 220 ntBASIC4.66□□□□□ -1.66
COL25A1Q9BXS0 HSPE1P13-201ENST00000451143 297 ntBASIC4.66□□□□□ -1.66
COL25A1Q9BXS0 RNU6-155P-201ENST00000516347 100 ntBASIC4.66□□□□□ -1.66
COL25A1Q9BXS0 RN7SKP277-201ENST00000516895 283 ntBASIC4.66□□□□□ -1.66
COL25A1Q9BXS0 AL391813.1-201ENST00000603098 260 ntBASIC4.66□□□□□ -1.66
COL25A1Q9BXS0 CCT7-217ENST00000626868 249 ntTSL 5 BASIC4.66□□□□□ -1.66
COL25A1Q9BXS0 HYDIN-201ENST00000288168 2953 ntAPPRIS ALT2 TSL 1 (best) BASIC4.66□□□□□ -1.66
COL25A1Q9BXS0 KAT6B-201ENST00000287239 8287 ntAPPRIS P3 TSL 1 (best) BASIC4.66□□□□□ -1.66
COL25A1Q9BXS0 FANCI-201ENST00000300027 4713 ntAPPRIS P3 TSL 5 BASIC4.66□□□□□ -1.66
COL25A1Q9BXS0 SLC1A3-201ENST00000265113 4170 ntAPPRIS P1 TSL 1 (best) BASIC4.66□□□□□ -1.66
COL25A1Q9BXS0 IQCH-202ENST00000358767 3062 ntTSL 5 BASIC4.66□□□□□ -1.66
COL25A1Q9BXS0 AC010329.2-201ENST00000595195 2737 ntBASIC4.66□□□□□ -1.66
COL25A1Q9BXS0 SMG1P6-201ENST00000532337 2930 ntBASIC4.66□□□□□ -1.66
COL25A1Q9BXS0 PTK2-206ENST00000517712 3351 ntTSL 2 BASIC4.65□□□□□ -1.66
COL25A1Q9BXS0 ZBTB21-201ENST00000310826 7449 ntAPPRIS P1 TSL 1 (best) BASIC4.65□□□□□ -1.66
COL25A1Q9BXS0 HHLA2-209ENST00000489514 2406 ntAPPRIS P3 TSL 1 (best) BASIC4.65□□□□□ -1.66
COL25A1Q9BXS0 AMY1B-201ENST00000330330 1862 ntAPPRIS P1 TSL 1 (best) BASIC4.65□□□□□ -1.66
COL25A1Q9BXS0 AP1G1-207ENST00000564155 2723 ntTSL 1 (best) BASIC4.65□□□□□ -1.66
COL25A1Q9BXS0 RNU6-78P-201ENST00000362897 107 ntBASIC4.65□□□□□ -1.67
COL25A1Q9BXS0 SNORA29-201ENST00000384183 140 ntBASIC4.65□□□□□ -1.67
COL25A1Q9BXS0 RNU6-905P-201ENST00000384434 107 ntBASIC4.65□□□□□ -1.67
COL25A1Q9BXS0 MIR487A-201ENST00000385009 80 ntBASIC4.65□□□□□ -1.67
COL25A1Q9BXS0 MIR34A-201ENST00000385130 110 ntBASIC4.65□□□□□ -1.67
COL25A1Q9BXS0 AL078601.2-201ENST00000429444 474 ntTSL 2 BASIC4.65□□□□□ -1.67
COL25A1Q9BXS0 LINC01073-201ENST00000441659 149 ntTSL 3 BASIC4.65□□□□□ -1.67
COL25A1Q9BXS0 AC010095.1-201ENST00000443543 144 ntBASIC4.65□□□□□ -1.67
COL25A1Q9BXS0 AC114501.3-201ENST00000453648 164 ntTSL 5 BASIC4.65□□□□□ -1.67
COL25A1Q9BXS0 AC079760.1-201ENST00000456952 202 ntTSL 3 BASIC4.65□□□□□ -1.67
COL25A1Q9BXS0 RPS26P28-201ENST00000470806 348 ntBASIC4.65□□□□□ -1.67
COL25A1Q9BXS0 AC015468.4-201ENST00000523496 568 ntTSL 4 BASIC4.65□□□□□ -1.67
COL25A1Q9BXS0 LINC02309-201ENST00000553679 207 ntTSL 3 BASIC4.65□□□□□ -1.67
COL25A1Q9BXS0 AL355076.2-201ENST00000555736 544 ntTSL 5 BASIC4.65□□□□□ -1.67
COL25A1Q9BXS0 AC126323.3-201ENST00000565136 564 ntTSL 4 BASIC4.65□□□□□ -1.67
COL25A1Q9BXS0 AC108738.1-201ENST00000603703 237 ntBASIC4.65□□□□□ -1.67
COL25A1Q9BXS0 AC107031.1-201ENST00000604939 347 ntTSL 2 BASIC4.65□□□□□ -1.67
COL25A1Q9BXS0 AC004467.1-201ENST00000615678 330 ntBASIC4.65□□□□□ -1.67
COL25A1Q9BXS0 AC106754.2-201ENST00000623006 233 ntBASIC4.65□□□□□ -1.67
COL25A1Q9BXS0 COA1-220ENST00000640232 192 ntAPPRIS ALT2 TSL 3 BASIC4.65□□□□□ -1.67
COL25A1Q9BXS0 POSTN-204ENST00000379749 3210 ntTSL 5 BASIC4.65□□□□□ -1.67
COL25A1Q9BXS0 TIPARP-207ENST00000542783 3681 ntAPPRIS P1 TSL 1 (best) BASIC4.65□□□□□ -1.67
COL25A1Q9BXS0 AC104260.2-201ENST00000623551 3497 ntBASIC4.65□□□□□ -1.67
COL25A1Q9BXS0 ITGB1-205ENST00000423113 3729 ntAPPRIS ALT1 TSL 5 BASIC4.65□□□□□ -1.67
COL25A1Q9BXS0 AC134026.1-201ENST00000623249 2239 ntBASIC4.65□□□□□ -1.67
COL25A1Q9BXS0 CP-201ENST00000264613 4676 ntAPPRIS P1 TSL 1 (best) BASIC4.65□□□□□ -1.67
COL25A1Q9BXS0 LINC00504-201ENST00000505089 4672 ntTSL 2 BASIC4.65□□□□□ -1.67
COL25A1Q9BXS0 AC125257.1-201ENST00000560400 2930 ntBASIC4.65□□□□□ -1.67
COL25A1Q9BXS0 SEC31A-204ENST00000355196 4104 ntAPPRIS P4 TSL 2 BASIC4.65□□□□□ -1.67
COL25A1Q9BXS0 RIMS1-206ENST00000425662 2799 ntTSL 1 (best) BASIC4.65□□□□□ -1.67
COL25A1Q9BXS0 DNAH5-201ENST00000265104 15633 ntAPPRIS P1 TSL 1 (best) BASIC4.64□□□□□ -1.67
COL25A1Q9BXS0 MBNL2-204ENST00000397601 4487 ntTSL 5 BASIC4.64□□□□□ -1.67
COL25A1Q9BXS0 RNF19A-205ENST00000519449 4330 ntAPPRIS P1 TSL 1 (best) BASIC4.64□□□□□ -1.67
COL25A1Q9BXS0 PLD1-203ENST00000356327 5855 ntAPPRIS P1 TSL 1 (best) BASIC4.64□□□□□ -1.67
COL25A1Q9BXS0 CEP83-202ENST00000397807 2737 ntTSL 5 BASIC4.64□□□□□ -1.67
COL25A1Q9BXS0 MIR331-201ENST00000362302 94 ntBASIC4.64□□□□□ -1.67
COL25A1Q9BXS0 RNU6-105P-201ENST00000363909 104 ntBASIC4.64□□□□□ -1.67
COL25A1Q9BXS0 DEFB119-203ENST00000376321 457 ntAPPRIS P3 TSL 1 (best) BASIC4.64□□□□□ -1.67
COL25A1Q9BXS0 SNORA8.3-201ENST00000384679 139 ntBASIC4.64□□□□□ -1.67
COL25A1Q9BXS0 Y_RNA.572-201ENST00000384757 98 ntBASIC4.64□□□□□ -1.67
COL25A1Q9BXS0 MIR616-201ENST00000385293 97 ntBASIC4.64□□□□□ -1.67
COL25A1Q9BXS0 Y_RNA.630-201ENST00000411370 108 ntBASIC4.64□□□□□ -1.67
COL25A1Q9BXS0 LINC01509-202ENST00000423523 408 ntTSL 3 BASIC4.64□□□□□ -1.67
COL25A1Q9BXS0 COX6CP13-201ENST00000428703 226 ntBASIC4.64□□□□□ -1.67
COL25A1Q9BXS0 AC005154.1-208ENST00000440438 353 ntTSL 5 BASIC4.64□□□□□ -1.67
COL25A1Q9BXS0 AC115115.1-201ENST00000449927 248 ntBASIC4.64□□□□□ -1.67
COL25A1Q9BXS0 AL451050.1-201ENST00000450126 415 ntBASIC4.64□□□□□ -1.67
COL25A1Q9BXS0 AL121914.1-201ENST00000450188 156 ntBASIC4.64□□□□□ -1.67
Retrieved 100 of 98,524 protein–RNA pairs in 105.9 ms