Protein–RNA interactions for Protein: Q9BSR8

YIPF4, Protein YIPF4, humanhuman

Predictions only

Length 244 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
YIPF4Q9BSR8 MAGI2-AS3-224ENST00000619135 205 ntTSL 5 BASIC3.91□□□□□ -1.78
YIPF4Q9BSR8 AC090617.7-201ENST00000623952 126 ntBASIC3.91□□□□□ -1.78
YIPF4Q9BSR8 AL161457.2-203ENST00000590767 2663 ntTSL 5 BASIC3.91□□□□□ -1.78
YIPF4Q9BSR8 PIGN-240ENST00000639912 6530 ntTSL 5 BASIC3.91□□□□□ -1.78
YIPF4Q9BSR8 MACF1-204ENST00000372915 23440 ntAPPRIS ALT2 TSL 5 BASIC3.91□□□□□ -1.78
YIPF4Q9BSR8 PPP1R9A-208ENST00000456331 10090 ntTSL 1 (best) BASIC3.91□□□□□ -1.78
YIPF4Q9BSR8 AP000560.1-201ENST00000624150 1937 ntBASIC3.91□□□□□ -1.78
YIPF4Q9BSR8 AC010615.1-201ENST00000594254 1764 ntBASIC3.91□□□□□ -1.78
YIPF4Q9BSR8 USH2A-201ENST00000307340 18883 ntAPPRIS P1 TSL 1 (best) BASIC3.91□□□□□ -1.78
YIPF4Q9BSR8 KIFAP3-202ENST00000367765 4111 ntTSL 2 BASIC3.91□□□□□ -1.78
YIPF4Q9BSR8 TUSC7-203ENST00000477539 2415 ntTSL 1 (best) BASIC3.91□□□□□ -1.78
YIPF4Q9BSR8 TAOK3-202ENST00000419821 4301 ntAPPRIS P1 TSL 1 (best) BASIC3.91□□□□□ -1.78
YIPF4Q9BSR8 SRP72P2-201ENST00000344851 1979 ntBASIC3.91□□□□□ -1.78
YIPF4Q9BSR8 HDX-202ENST00000373177 2924 ntAPPRIS P1 TSL 1 (best) BASIC3.91□□□□□ -1.78
YIPF4Q9BSR8 AC007256.1-201ENST00000392253 2765 ntBASIC3.91□□□□□ -1.78
YIPF4Q9BSR8 RFX7-201ENST00000559447 10426 ntAPPRIS P5 TSL 5 BASIC3.91□□□□□ -1.78
YIPF4Q9BSR8 MTND5P9-201ENST00000503854 1755 ntBASIC3.9□□□□□ -1.79
YIPF4Q9BSR8 MIR383-201ENST00000362257 73 ntBASIC3.9□□□□□ -1.79
YIPF4Q9BSR8 Y_RNA.60-201ENST00000362831 98 ntBASIC3.9□□□□□ -1.79
YIPF4Q9BSR8 RNU6-884P-201ENST00000363889 107 ntBASIC3.9□□□□□ -1.79
YIPF4Q9BSR8 RNA5SP515-201ENST00000364570 118 ntBASIC3.9□□□□□ -1.79
YIPF4Q9BSR8 RNU1-73P-201ENST00000383971 164 ntBASIC3.9□□□□□ -1.79
YIPF4Q9BSR8 Y_RNA.489-201ENST00000384410 101 ntBASIC3.9□□□□□ -1.79
YIPF4Q9BSR8 MIR625-201ENST00000385047 85 ntBASIC3.9□□□□□ -1.79
YIPF4Q9BSR8 TRAJ40-201ENST00000390497 61 ntAPPRIS P1 BASIC3.9□□□□□ -1.79
YIPF4Q9BSR8 RNU6-121P-201ENST00000410525 99 ntBASIC3.9□□□□□ -1.79
YIPF4Q9BSR8 RNA5SP494-201ENST00000410653 129 ntBASIC3.9□□□□□ -1.79
YIPF4Q9BSR8 AL627311.1-201ENST00000431514 115 ntBASIC3.9□□□□□ -1.79
YIPF4Q9BSR8 AC007389.2-201ENST00000434630 306 ntBASIC3.9□□□□□ -1.79
YIPF4Q9BSR8 AL078601.1-201ENST00000444542 271 ntBASIC3.9□□□□□ -1.79
YIPF4Q9BSR8 AC135371.1-201ENST00000446964 453 ntTSL 2 BASIC3.9□□□□□ -1.79
YIPF4Q9BSR8 AC013470.1-201ENST00000453438 462 ntBASIC3.9□□□□□ -1.79
YIPF4Q9BSR8 AC133134.1-201ENST00000466800 359 ntBASIC3.9□□□□□ -1.79
YIPF4Q9BSR8 AC025554.1-201ENST00000505641 188 ntBASIC3.9□□□□□ -1.79
YIPF4Q9BSR8 AL592156.1-201ENST00000508758 304 ntBASIC3.9□□□□□ -1.79
YIPF4Q9BSR8 RNU1-103P-201ENST00000516502 125 ntBASIC3.9□□□□□ -1.79
YIPF4Q9BSR8 SNORA31.19-201ENST00000517079 126 ntBASIC3.9□□□□□ -1.79
YIPF4Q9BSR8 RNU6-897P-201ENST00000517135 105 ntBASIC3.9□□□□□ -1.79
YIPF4Q9BSR8 CYCSP29-201ENST00000533731 318 ntBASIC3.9□□□□□ -1.79
YIPF4Q9BSR8 AF123462.1-201ENST00000554307 446 ntTSL 3 BASIC3.9□□□□□ -1.79
YIPF4Q9BSR8 AC022655.2-201ENST00000577280 318 ntBASIC3.9□□□□□ -1.79
YIPF4Q9BSR8 MIR3128-201ENST00000581957 66 ntBASIC3.9□□□□□ -1.79
YIPF4Q9BSR8 AC006557.5-201ENST00000603126 811 ntBASIC3.9□□□□□ -1.79
YIPF4Q9BSR8 AC012468.1-201ENST00000604888 430 ntBASIC3.9□□□□□ -1.79
YIPF4Q9BSR8 AC012603.1-201ENST00000606424 528 ntBASIC3.9□□□□□ -1.79
YIPF4Q9BSR8 AC009318.2-201ENST00000610917 651 ntBASIC3.9□□□□□ -1.79
YIPF4Q9BSR8 MIR8076-201ENST00000611401 83 ntBASIC3.9□□□□□ -1.79
YIPF4Q9BSR8 AL159153.1-201ENST00000619688 317 ntBASIC3.9□□□□□ -1.79
YIPF4Q9BSR8 MIR3653-201ENST00000625572 110 ntBASIC3.9□□□□□ -1.79
YIPF4Q9BSR8 ZNF266-203ENST00000588933 3293 ntAPPRIS P1 TSL 1 (best) BASIC3.9□□□□□ -1.79
YIPF4Q9BSR8 PTP4A1-205ENST00000626021 2203 ntAPPRIS P1 TSL 1 (best) BASIC3.9□□□□□ -1.79
YIPF4Q9BSR8 RAB3C-201ENST00000282878 8896 ntAPPRIS P1 TSL 1 (best) BASIC3.9□□□□□ -1.79
YIPF4Q9BSR8 SCN3A-201ENST00000283254 9091 ntAPPRIS P3 TSL 1 (best) BASIC3.9□□□□□ -1.79
YIPF4Q9BSR8 MCF2-201ENST00000338585 2826 ntAPPRIS ALT2 TSL 1 (best) BASIC3.89□□□□□ -1.79
YIPF4Q9BSR8 CADM2-AS1-201ENST00000476021 2656 ntTSL 1 (best) BASIC3.89□□□□□ -1.79
YIPF4Q9BSR8 FAM126B-202ENST00000418596 9333 ntAPPRIS P1 TSL 1 (best) BASIC3.89□□□□□ -1.79
YIPF4Q9BSR8 AMY2A-201ENST00000414303 1634 ntAPPRIS P1 TSL 1 (best) BASIC3.89□□□□□ -1.79
YIPF4Q9BSR8 NDST3-201ENST00000296499 5961 ntAPPRIS P1 TSL 1 (best) BASIC3.89□□□□□ -1.79
YIPF4Q9BSR8 WDR72-204ENST00000559418 3602 ntTSL 5 BASIC3.89□□□□□ -1.79
YIPF4Q9BSR8 RNA5SP366-201ENST00000365454 123 ntBASIC3.89□□□□□ -1.79
YIPF4Q9BSR8 SNORA37-201ENST00000384504 129 ntBASIC3.89□□□□□ -1.79
YIPF4Q9BSR8 AC010163.2-201ENST00000416341 381 ntTSL 2 BASIC3.89□□□□□ -1.79
YIPF4Q9BSR8 EIF4EP2-201ENST00000422816 654 ntBASIC3.89□□□□□ -1.79
YIPF4Q9BSR8 MTND3P9-201ENST00000429526 346 ntBASIC3.89□□□□□ -1.79
YIPF4Q9BSR8 AL121872.1-202ENST00000435867 308 ntTSL 5 BASIC3.89□□□□□ -1.79
YIPF4Q9BSR8 AC092798.1-201ENST00000458542 409 ntBASIC3.89□□□□□ -1.79
YIPF4Q9BSR8 AC092919.1-201ENST00000467896 229 ntTSL 2 BASIC3.89□□□□□ -1.79
YIPF4Q9BSR8 AC006517.1-201ENST00000480485 328 ntBASIC3.89□□□□□ -1.79
YIPF4Q9BSR8 LINC02110-201ENST00000503870 546 ntTSL 3 BASIC3.89□□□□□ -1.79
YIPF4Q9BSR8 LINC02122-201ENST00000511395 577 ntTSL 4 BASIC3.89□□□□□ -1.79
YIPF4Q9BSR8 RNU6-572P-201ENST00000516724 80 ntBASIC3.89□□□□□ -1.79
YIPF4Q9BSR8 HSPE1P20-201ENST00000538133 289 ntBASIC3.89□□□□□ -1.79
YIPF4Q9BSR8 NACAP3-201ENST00000552100 481 ntBASIC3.89□□□□□ -1.79
YIPF4Q9BSR8 PWRN1-209ENST00000568019 359 ntTSL 3 BASIC3.89□□□□□ -1.79
YIPF4Q9BSR8 AC087749.2-201ENST00000583910 352 ntTSL 5 BASIC3.89□□□□□ -1.79
YIPF4Q9BSR8 AC008121.1-201ENST00000603244 268 ntBASIC3.89□□□□□ -1.79
YIPF4Q9BSR8 SRGNP1-201ENST00000603392 451 ntBASIC3.89□□□□□ -1.79
YIPF4Q9BSR8 AC005046.1-201ENST00000608515 625 ntBASIC3.89□□□□□ -1.79
YIPF4Q9BSR8 FAM27D1-201ENST00000612308 341 ntBASIC3.89□□□□□ -1.79
YIPF4Q9BSR8 MIR7702-201ENST00000621931 59 ntBASIC3.89□□□□□ -1.79
YIPF4Q9BSR8 MAP3K21-201ENST00000366622 4005 ntTSL 1 (best) BASIC3.89□□□□□ -1.79
YIPF4Q9BSR8 FRYL-205ENST00000503238 11103 ntAPPRIS P1 TSL 5 BASIC3.89□□□□□ -1.79
YIPF4Q9BSR8 AC018555.1-201ENST00000567548 1980 ntBASIC3.89□□□□□ -1.79
YIPF4Q9BSR8 SLC30A6-204ENST00000406369 4589 ntTSL 1 (best) BASIC3.88□□□□□ -1.79
YIPF4Q9BSR8 AC010680.1-201ENST00000590024 3590 ntBASIC3.88□□□□□ -1.79
YIPF4Q9BSR8 ACTR6-212ENST00000552376 1659 ntTSL 5 BASIC3.88□□□□□ -1.79
YIPF4Q9BSR8 MGAT4A-204ENST00000414521 3709 ntTSL 2 BASIC3.88□□□□□ -1.79
YIPF4Q9BSR8 CCDC14-217ENST00000485727 7917 ntAPPRIS ALT2 TSL 1 (best) BASIC3.88□□□□□ -1.79
YIPF4Q9BSR8 CCDC30-212ENST00000507855 2445 ntAPPRIS ALT2 TSL 1 (best) BASIC3.88□□□□□ -1.79
YIPF4Q9BSR8 Y_RNA.14-201ENST00000362415 103 ntBASIC3.88□□□□□ -1.79
YIPF4Q9BSR8 Y_RNA.19-201ENST00000362462 99 ntBASIC3.88□□□□□ -1.79
YIPF4Q9BSR8 Y_RNA.350-201ENST00000365409 98 ntBASIC3.88□□□□□ -1.79
YIPF4Q9BSR8 Y_RNA.518-201ENST00000384552 113 ntBASIC3.88□□□□□ -1.79
YIPF4Q9BSR8 MIR23B-201ENST00000384832 97 ntBASIC3.88□□□□□ -1.79
YIPF4Q9BSR8 TRAV9-2-201ENST00000390441 394 ntAPPRIS P1 BASIC3.88□□□□□ -1.79
YIPF4Q9BSR8 SNORA48.7-201ENST00000391302 135 ntBASIC3.88□□□□□ -1.79
YIPF4Q9BSR8 Y_RNA.592-201ENST00000410274 109 ntBASIC3.88□□□□□ -1.79
YIPF4Q9BSR8 AL356968.1-201ENST00000416622 474 ntBASIC3.88□□□□□ -1.79
YIPF4Q9BSR8 RPL21P38-201ENST00000418090 167 ntBASIC3.88□□□□□ -1.79
YIPF4Q9BSR8 COX6B1P7-201ENST00000430845 235 ntBASIC3.88□□□□□ -1.79
Retrieved 100 of 98,524 protein–RNA pairs in 104.7 ms