Protein–RNA interactions for Protein: Q96NU0

CNTNAP3B, Contactin-associated protein-like 3B, humanhuman

Predictions only

Length 1,288 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CNTNAP3BQ96NU0 GOT2P5-201ENST00000433995 546 ntBASIC4.71□□□□□ -1.66
CNTNAP3BQ96NU0 AC016831.4-201ENST00000438302 307 ntBASIC4.71□□□□□ -1.66
CNTNAP3BQ96NU0 LINC01073-201ENST00000441659 149 ntTSL 3 BASIC4.71□□□□□ -1.66
CNTNAP3BQ96NU0 RPL7AP61-201ENST00000443410 636 ntBASIC4.71□□□□□ -1.66
CNTNAP3BQ96NU0 SCARNA8-201ENST00000515924 131 ntBASIC4.71□□□□□ -1.66
CNTNAP3BQ96NU0 SNORA70.24-201ENST00000517233 118 ntBASIC4.71□□□□□ -1.66
CNTNAP3BQ96NU0 AP004371.1-201ENST00000525240 214 ntBASIC4.71□□□□□ -1.66
CNTNAP3BQ96NU0 AC106754.2-201ENST00000623006 233 ntBASIC4.71□□□□□ -1.66
CNTNAP3BQ96NU0 AC068631.1-219ENST00000625826 668 ntTSL 5 BASIC4.71□□□□□ -1.66
CNTNAP3BQ96NU0 NEK3-211ENST00000629912 141 ntTSL 5 BASIC4.71□□□□□ -1.66
CNTNAP3BQ96NU0 AL596211.1-201ENST00000569873 2277 ntBASIC4.71□□□□□ -1.66
CNTNAP3BQ96NU0 AC006206.1-201ENST00000544842 3387 ntBASIC4.71□□□□□ -1.66
CNTNAP3BQ96NU0 MTUS1-202ENST00000297488 3731 ntAPPRIS ALT1 TSL 1 (best) BASIC4.71□□□□□ -1.66
CNTNAP3BQ96NU0 RASA1-205ENST00000512763 3060 ntAPPRIS ALT2 TSL 2 BASIC4.71□□□□□ -1.66
CNTNAP3BQ96NU0 SLC25A17-202ENST00000402844 2405 ntTSL 2 BASIC4.71□□□□□ -1.66
CNTNAP3BQ96NU0 AC104964.3-201ENST00000606115 2860 ntBASIC4.71□□□□□ -1.66
CNTNAP3BQ96NU0 TMEM154-201ENST00000304385 10698 ntAPPRIS P2 TSL 1 (best) BASIC4.7□□□□□ -1.66
CNTNAP3BQ96NU0 RBMS3-205ENST00000434693 8540 ntTSL 5 BASIC4.7□□□□□ -1.66
CNTNAP3BQ96NU0 RNF111-212ENST00000561186 4536 ntTSL 2 BASIC4.7□□□□□ -1.66
CNTNAP3BQ96NU0 ZNF420-202ENST00000337995 3535 ntAPPRIS P1 TSL 1 (best) BASIC4.7□□□□□ -1.66
CNTNAP3BQ96NU0 SMNDC1-202ENST00000369603 4341 ntAPPRIS P1 TSL 1 (best) BASIC4.7□□□□□ -1.66
CNTNAP3BQ96NU0 CFAP70-203ENST00000355577 3691 ntTSL 5 BASIC4.7□□□□□ -1.66
CNTNAP3BQ96NU0 OR4F13P-202ENST00000560066 2054 ntBASIC4.7□□□□□ -1.66
CNTNAP3BQ96NU0 RNU6-137P-201ENST00000363680 108 ntBASIC4.7□□□□□ -1.66
CNTNAP3BQ96NU0 RNU6-640P-201ENST00000363693 105 ntBASIC4.7□□□□□ -1.66
CNTNAP3BQ96NU0 RNU6-1164P-201ENST00000364428 107 ntBASIC4.7□□□□□ -1.66
CNTNAP3BQ96NU0 Y_RNA.280-201ENST00000364765 112 ntBASIC4.7□□□□□ -1.66
CNTNAP3BQ96NU0 RNA5SP235-201ENST00000365411 114 ntBASIC4.7□□□□□ -1.66
CNTNAP3BQ96NU0 U8.10-201ENST00000384260 133 ntBASIC4.7□□□□□ -1.66
CNTNAP3BQ96NU0 Y_RNA.558-201ENST00000384685 113 ntBASIC4.7□□□□□ -1.66
CNTNAP3BQ96NU0 MIR10A-201ENST00000385043 110 ntBASIC4.7□□□□□ -1.66
CNTNAP3BQ96NU0 RNA5SP296-201ENST00000410523 111 ntBASIC4.7□□□□□ -1.66
CNTNAP3BQ96NU0 EIF4A1P3-201ENST00000411521 244 ntBASIC4.7□□□□□ -1.66
CNTNAP3BQ96NU0 RNF10P1-201ENST00000418589 369 ntBASIC4.7□□□□□ -1.66
CNTNAP3BQ96NU0 HSPE1P13-201ENST00000451143 297 ntBASIC4.7□□□□□ -1.66
CNTNAP3BQ96NU0 RNU6-65P-201ENST00000516332 98 ntBASIC4.7□□□□□ -1.66
CNTNAP3BQ96NU0 Y_RNA.685-201ENST00000516532 108 ntBASIC4.7□□□□□ -1.66
CNTNAP3BQ96NU0 RNA5SP290-201ENST00000517133 127 ntBASIC4.7□□□□□ -1.66
CNTNAP3BQ96NU0 RNA5SP291-201ENST00000517222 105 ntBASIC4.7□□□□□ -1.66
CNTNAP3BQ96NU0 RNU2-60P-201ENST00000517290 128 ntBASIC4.7□□□□□ -1.66
CNTNAP3BQ96NU0 AC136475.4-201ENST00000534271 280 ntTSL 5 BASIC4.7□□□□□ -1.66
CNTNAP3BQ96NU0 AL078604.3-201ENST00000615580 211 ntBASIC4.7□□□□□ -1.66
CNTNAP3BQ96NU0 AL023881.1-201ENST00000621088 301 ntBASIC4.7□□□□□ -1.66
CNTNAP3BQ96NU0 Metazoa_SRP.93-201ENST00000622525 276 ntBASIC4.7□□□□□ -1.66
CNTNAP3BQ96NU0 LINC01187-201ENST00000506431 2314 ntTSL 5 BASIC4.7□□□□□ -1.66
CNTNAP3BQ96NU0 WAC-221ENST00000628285 2740 ntTSL 1 (best) BASIC4.7□□□□□ -1.66
CNTNAP3BQ96NU0 AC068647.1-201ENST00000489539 2265 ntBASIC4.7□□□□□ -1.66
CNTNAP3BQ96NU0 ATF2-202ENST00000345739 4079 ntTSL 1 (best) BASIC4.7□□□□□ -1.66
CNTNAP3BQ96NU0 FRYL-209ENST00000506685 1940 ntTSL 5 BASIC4.7□□□□□ -1.66
CNTNAP3BQ96NU0 CCDC178-204ENST00000403303 3354 ntAPPRIS ALT2 TSL 1 (best) BASIC4.7□□□□□ -1.66
CNTNAP3BQ96NU0 AC092650.1-201ENST00000447571 1808 ntTSL 1 (best) BASIC4.69□□□□□ -1.66
CNTNAP3BQ96NU0 SLC1A3-202ENST00000381918 3652 ntTSL 1 (best) BASIC4.69□□□□□ -1.66
CNTNAP3BQ96NU0 PIGN-210ENST00000588571 1960 ntTSL 5 BASIC4.69□□□□□ -1.66
CNTNAP3BQ96NU0 SIAH1-202ENST00000380006 3352 ntAPPRIS P3 BASIC4.69□□□□□ -1.66
CNTNAP3BQ96NU0 AC010300.1-201ENST00000600671 5134 ntBASIC4.69□□□□□ -1.66
CNTNAP3BQ96NU0 LRIT3-201ENST00000327908 3781 ntTSL 2 BASIC4.69□□□□□ -1.66
CNTNAP3BQ96NU0 MACC1-205ENST00000589011 2686 ntAPPRIS P1 TSL 5 BASIC4.69□□□□□ -1.66
CNTNAP3BQ96NU0 Y_RNA.348-201ENST00000365403 103 ntBASIC4.69□□□□□ -1.66
CNTNAP3BQ96NU0 RNU6-643P-201ENST00000384018 107 ntBASIC4.69□□□□□ -1.66
CNTNAP3BQ96NU0 MIR7-3-201ENST00000384898 110 ntBASIC4.69□□□□□ -1.66
CNTNAP3BQ96NU0 MIR449B-201ENST00000384995 97 ntBASIC4.69□□□□□ -1.66
CNTNAP3BQ96NU0 MIR888-201ENST00000401186 77 ntBASIC4.69□□□□□ -1.66
CNTNAP3BQ96NU0 AC093578.1-201ENST00000415219 368 ntBASIC4.69□□□□□ -1.66
CNTNAP3BQ96NU0 AC079780.1-201ENST00000428259 207 ntBASIC4.69□□□□□ -1.66
CNTNAP3BQ96NU0 AC124916.1-201ENST00000444020 547 ntBASIC4.69□□□□□ -1.66
CNTNAP3BQ96NU0 PTMAP3-201ENST00000447474 330 ntBASIC4.69□□□□□ -1.66
CNTNAP3BQ96NU0 AL136164.1-201ENST00000456795 352 ntTSL 3 BASIC4.69□□□□□ -1.66
CNTNAP3BQ96NU0 AC079760.1-201ENST00000456952 202 ntTSL 3 BASIC4.69□□□□□ -1.66
CNTNAP3BQ96NU0 RNU6-453P-201ENST00000516819 85 ntBASIC4.69□□□□□ -1.66
CNTNAP3BQ96NU0 SPTY2D1-AS1-203ENST00000542172 331 ntAPPRIS ALT2 TSL 1 (best) BASIC4.69□□□□□ -1.66
CNTNAP3BQ96NU0 UBL5-207ENST00000590068 390 ntAPPRIS P1 TSL 5 BASIC4.69□□□□□ -1.66
CNTNAP3BQ96NU0 MIR1245B-201ENST00000636115 69 ntBASIC4.69□□□□□ -1.66
CNTNAP3BQ96NU0 SEC31A-217ENST00000505984 3596 ntTSL 1 (best) BASIC4.69□□□□□ -1.66
CNTNAP3BQ96NU0 RAB18-209ENST00000621805 4894 ntTSL 1 (best) BASIC4.69□□□□□ -1.66
CNTNAP3BQ96NU0 LDAH-211ENST00000541941 3807 ntTSL 2 BASIC4.69□□□□□ -1.66
CNTNAP3BQ96NU0 CTSS-201ENST00000368985 4107 ntAPPRIS P1 TSL 1 (best) BASIC4.69□□□□□ -1.66
CNTNAP3BQ96NU0 TMEM30A-202ENST00000370050 3775 ntTSL 1 (best) BASIC4.68□□□□□ -1.66
CNTNAP3BQ96NU0 EYA1-203ENST00000388740 3788 ntTSL 5 BASIC4.68□□□□□ -1.66
CNTNAP3BQ96NU0 DCLRE1A-201ENST00000361384 4468 ntAPPRIS P1 TSL 1 (best) BASIC4.68□□□□□ -1.66
CNTNAP3BQ96NU0 LINC01355-201ENST00000566551 5444 ntBASIC4.68□□□□□ -1.66
CNTNAP3BQ96NU0 ZNF850-203ENST00000614887 7625 ntAPPRIS ALT2 TSL 1 (best) BASIC4.68□□□□□ -1.66
CNTNAP3BQ96NU0 RASSF6-204ENST00000395777 2735 ntTSL 1 (best) BASIC4.68□□□□□ -1.66
CNTNAP3BQ96NU0 AC025031.4-201ENST00000621248 3271 ntBASIC4.68□□□□□ -1.66
CNTNAP3BQ96NU0 SAMD12-202ENST00000409003 8866 ntAPPRIS P1 TSL 5 BASIC4.68□□□□□ -1.66
CNTNAP3BQ96NU0 AL353743.1-202ENST00000431724 1695 ntBASIC4.68□□□□□ -1.66
CNTNAP3BQ96NU0 PTPRD-203ENST00000381196 9911 ntAPPRIS P1 TSL 5 BASIC4.68□□□□□ -1.66
CNTNAP3BQ96NU0 AL034549.2-201ENST00000618285 3373 ntBASIC4.68□□□□□ -1.66
CNTNAP3BQ96NU0 Y_RNA.319-201ENST00000365138 92 ntBASIC4.68□□□□□ -1.66
CNTNAP3BQ96NU0 RNA5SP223-201ENST00000365174 120 ntBASIC4.68□□□□□ -1.66
CNTNAP3BQ96NU0 AL590383.1-201ENST00000428602 75 ntBASIC4.68□□□□□ -1.66
CNTNAP3BQ96NU0 AC005154.1-208ENST00000440438 353 ntTSL 5 BASIC4.68□□□□□ -1.66
CNTNAP3BQ96NU0 LINC01359-203ENST00000444349 381 ntTSL 5 BASIC4.68□□□□□ -1.66
CNTNAP3BQ96NU0 AL354824.2-201ENST00000458004 446 ntTSL 3 BASIC4.68□□□□□ -1.66
CNTNAP3BQ96NU0 AC105137.1-201ENST00000484355 562 ntBASIC4.68□□□□□ -1.66
CNTNAP3BQ96NU0 AC146944.2-203ENST00000502493 354 ntBASIC4.68□□□□□ -1.66
CNTNAP3BQ96NU0 AC098976.1-201ENST00000513014 541 ntBASIC4.68□□□□□ -1.66
CNTNAP3BQ96NU0 AC139495.1-202ENST00000513164 354 ntBASIC4.68□□□□□ -1.66
CNTNAP3BQ96NU0 AC027369.5-201ENST00000533838 755 ntBASIC4.68□□□□□ -1.66
CNTNAP3BQ96NU0 LINC01570-201ENST00000561572 434 ntTSL 3 BASIC4.68□□□□□ -1.66
CNTNAP3BQ96NU0 AL391813.1-201ENST00000603098 260 ntBASIC4.68□□□□□ -1.66
Retrieved 100 of 98,524 protein–RNA pairs in 99.5 ms