Protein–RNA interactions for Protein: Q92902

HPS1, Hermansky-Pudlak syndrome 1 protein, humanhuman

Predictions only

Length 700 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HPS1Q92902 ZNF525-202ENST00000474037 3890 ntAPPRIS P1 TSL 5 BASIC4.72□□□□□ -1.65
HPS1Q92902 CLSPN-203ENST00000373220 3977 ntAPPRIS ALT2 TSL 1 (best) BASIC4.72□□□□□ -1.65
HPS1Q92902 VCAM1-203ENST00000370115 2475 ntTSL 5 BASIC4.72□□□□□ -1.65
HPS1Q92902 HNMT-202ENST00000280097 3295 ntAPPRIS P1 TSL 1 (best) BASIC4.72□□□□□ -1.65
HPS1Q92902 SEC31A-226ENST00000508479 3397 ntTSL 2 BASIC4.72□□□□□ -1.65
HPS1Q92902 PATL1-201ENST00000300146 4072 ntAPPRIS P1 TSL 1 (best) BASIC4.72□□□□□ -1.65
HPS1Q92902 RGS4-202ENST00000367908 2606 ntTSL 2 BASIC4.72□□□□□ -1.65
HPS1Q92902 FTX-210ENST00000603037 8347 ntTSL 5 BASIC4.72□□□□□ -1.65
HPS1Q92902 AC092268.1-201ENST00000342691 405 ntBASIC4.72□□□□□ -1.65
HPS1Q92902 RNU6-766P-201ENST00000362478 107 ntBASIC4.72□□□□□ -1.65
HPS1Q92902 RNU6-173P-201ENST00000364215 104 ntBASIC4.72□□□□□ -1.65
HPS1Q92902 Y_RNA.456-201ENST00000384232 111 ntBASIC4.72□□□□□ -1.65
HPS1Q92902 SPTLC1P2-201ENST00000407089 121 ntBASIC4.72□□□□□ -1.65
HPS1Q92902 U6atac.2-201ENST00000408644 118 ntBASIC4.72□□□□□ -1.65
HPS1Q92902 CYP4F29P-201ENST00000420685 446 ntBASIC4.72□□□□□ -1.65
HPS1Q92902 AC245028.1-201ENST00000423259 256 ntBASIC4.72□□□□□ -1.65
HPS1Q92902 AC007919.1-201ENST00000429380 217 ntBASIC4.72□□□□□ -1.65
HPS1Q92902 GHRL-209ENST00000446937 217 ntTSL 1 (best) BASIC4.72□□□□□ -1.65
HPS1Q92902 RNU7-141P-201ENST00000459304 62 ntBASIC4.72□□□□□ -1.65
HPS1Q92902 MFAP5-205ENST00000535336 566 ntTSL 4 BASIC4.72□□□□□ -1.65
HPS1Q92902 MIR378D2-201ENST00000580636 98 ntBASIC4.72□□□□□ -1.65
HPS1Q92902 AC090403.1-204ENST00000582893 572 ntTSL 4 BASIC4.72□□□□□ -1.65
HPS1Q92902 LINC00901.1-201ENST00000617252 152 ntBASIC4.72□□□□□ -1.65
HPS1Q92902 MIR6719-201ENST00000622428 87 ntBASIC4.72□□□□□ -1.65
HPS1Q92902 DNAJC9-AS1-204ENST00000440197 2865 ntTSL 1 (best) BASIC4.72□□□□□ -1.65
HPS1Q92902 MAP3K7-203ENST00000369327 4558 ntTSL 1 (best) BASIC4.72□□□□□ -1.65
HPS1Q92902 LINC01847-201ENST00000522627 5607 ntTSL 1 (best) BASIC4.72□□□□□ -1.65
HPS1Q92902 LZTFL1-216ENST00000539217 4113 ntTSL 2 BASIC4.72□□□□□ -1.65
HPS1Q92902 HERC5-203ENST00000508159 2243 ntTSL 2 BASIC4.72□□□□□ -1.65
HPS1Q92902 AC063976.2-201ENST00000425667 3556 ntBASIC4.71□□□□□ -1.65
HPS1Q92902 C2CD6-204ENST00000450242 2571 ntAPPRIS ALT2 TSL 1 (best) BASIC4.71□□□□□ -1.65
HPS1Q92902 RUFY3-201ENST00000226328 4233 ntTSL 1 (best) BASIC4.71□□□□□ -1.65
HPS1Q92902 AC026951.1-201ENST00000559530 2459 ntBASIC4.71□□□□□ -1.65
HPS1Q92902 LIX1-201ENST00000274382 4026 ntAPPRIS P1 TSL 1 (best) BASIC4.71□□□□□ -1.65
HPS1Q92902 FMNL2-202ENST00000475377 3648 ntTSL 5 BASIC4.71□□□□□ -1.65
HPS1Q92902 LINC01902-203ENST00000637369 7356 ntTSL 5 BASIC4.71□□□□□ -1.66
HPS1Q92902 LINC01566-202ENST00000569242 2801 ntTSL 1 (best) BASIC4.71□□□□□ -1.66
HPS1Q92902 AC139713.2-215ENST00000641428 5037 ntBASIC4.71□□□□□ -1.66
HPS1Q92902 CNGA1-209ENST00000544810 2722 ntAPPRIS ALT2 TSL 5 BASIC4.71□□□□□ -1.66
HPS1Q92902 LRRC8B-201ENST00000330947 7593 ntAPPRIS P1 TSL 5 BASIC4.71□□□□□ -1.66
HPS1Q92902 SNORD115-30-201ENST00000364117 82 ntBASIC4.71□□□□□ -1.66
HPS1Q92902 MIR223-201ENST00000385204 110 ntBASIC4.71□□□□□ -1.66
HPS1Q92902 AC012306.1-201ENST00000423267 114 ntBASIC4.71□□□□□ -1.66
HPS1Q92902 AC004875.1-201ENST00000432702 378 ntTSL 3 BASIC4.71□□□□□ -1.66
HPS1Q92902 NHS-AS1-201ENST00000452788 366 ntTSL 3 BASIC4.71□□□□□ -1.66
HPS1Q92902 KIAA0895-209ENST00000453212 956 ntTSL 3 BASIC4.71□□□□□ -1.66
HPS1Q92902 LINC01198-202ENST00000458282 558 ntTSL 5 BASIC4.71□□□□□ -1.66
HPS1Q92902 RN7SL610P-201ENST00000463845 291 ntBASIC4.71□□□□□ -1.66
HPS1Q92902 RPL7AP28-201ENST00000464513 571 ntBASIC4.71□□□□□ -1.66
HPS1Q92902 RN7SKP19-201ENST00000516016 252 ntBASIC4.71□□□□□ -1.66
HPS1Q92902 AC103794.1-201ENST00000531763 197 ntTSL 3 BASIC4.71□□□□□ -1.66
HPS1Q92902 AC009137.1-201ENST00000562790 260 ntTSL 3 BASIC4.71□□□□□ -1.66
HPS1Q92902 AC015845.1-202ENST00000580184 242 ntTSL 3 BASIC4.71□□□□□ -1.66
HPS1Q92902 AC005702.2-201ENST00000591035 481 ntAPPRIS P1 TSL 3 BASIC4.71□□□□□ -1.66
HPS1Q92902 AC019159.1-201ENST00000605094 187 ntBASIC4.71□□□□□ -1.66
HPS1Q92902 AC092636.1-201ENST00000608609 415 ntTSL 2 BASIC4.71□□□□□ -1.66
HPS1Q92902 AC126915.2-201ENST00000610957 190 ntBASIC4.71□□□□□ -1.66
HPS1Q92902 uc_338.18-201ENST00000615451 175 ntBASIC4.71□□□□□ -1.66
HPS1Q92902 AC006994.2-202ENST00000639259 3828 ntTSL 5 BASIC4.71□□□□□ -1.66
HPS1Q92902 RUVBL2-214ENST00000640699 153 ntTSL 5 BASIC4.71□□□□□ -1.66
HPS1Q92902 ADGRL3-202ENST00000504896 4816 ntTSL 5 BASIC4.71□□□□□ -1.66
HPS1Q92902 TOPBP1-201ENST00000260810 5378 ntAPPRIS P1 TSL 1 (best) BASIC4.71□□□□□ -1.66
HPS1Q92902 OR9Q2-202ENST00000641291 3774 ntAPPRIS P1 BASIC4.71□□□□□ -1.66
HPS1Q92902 DOPEY1-202ENST00000349129 8210 ntAPPRIS P3 TSL 1 (best) BASIC4.71□□□□□ -1.66
HPS1Q92902 VCAM1-202ENST00000347652 2812 ntTSL 1 (best) BASIC4.71□□□□□ -1.66
HPS1Q92902 MPHOSPH9-211ENST00000541076 6136 ntAPPRIS ALT2 TSL 5 BASIC4.71□□□□□ -1.66
HPS1Q92902 ALCAM-205ENST00000472644 4189 ntTSL 1 (best) BASIC4.71□□□□□ -1.66
HPS1Q92902 FOXP2-207ENST00000393494 2664 ntAPPRIS P2 TSL 5 BASIC4.7□□□□□ -1.66
HPS1Q92902 SRPK2-201ENST00000357311 3700 ntAPPRIS P3 TSL 1 (best) BASIC4.7□□□□□ -1.66
HPS1Q92902 LINC01748-204ENST00000635048 5678 ntTSL 5 BASIC4.7□□□□□ -1.66
HPS1Q92902 MYBPC1-204ENST00000452455 3861 ntAPPRIS ALT2 TSL 2 BASIC4.7□□□□□ -1.66
HPS1Q92902 SERPINA7-201ENST00000327674 2642 ntAPPRIS P1 TSL 1 (best) BASIC4.7□□□□□ -1.66
HPS1Q92902 PCDH15-212ENST00000395442 2970 ntTSL 5 BASIC4.7□□□□□ -1.66
HPS1Q92902 MLF1-203ENST00000392822 2157 ntTSL 5 BASIC4.7□□□□□ -1.66
HPS1Q92902 AC022336.2-201ENST00000568966 2538 ntBASIC4.7□□□□□ -1.66
HPS1Q92902 MIR367-201ENST00000362299 68 ntBASIC4.7□□□□□ -1.66
HPS1Q92902 RNU6-799P-201ENST00000363567 107 ntBASIC4.7□□□□□ -1.66
HPS1Q92902 Y_RNA.281-201ENST00000364774 94 ntBASIC4.7□□□□□ -1.66
HPS1Q92902 Y_RNA.310-201ENST00000365063 113 ntBASIC4.7□□□□□ -1.66
HPS1Q92902 SNORA70-201ENST00000384436 135 ntBASIC4.7□□□□□ -1.66
HPS1Q92902 MIR518D-201ENST00000385014 87 ntBASIC4.7□□□□□ -1.66
HPS1Q92902 AL021153.1-201ENST00000427360 308 ntTSL 3 BASIC4.7□□□□□ -1.66
HPS1Q92902 RPS27P18-201ENST00000431701 247 ntBASIC4.7□□□□□ -1.66
HPS1Q92902 RPL35AP21-201ENST00000437667 333 ntBASIC4.7□□□□□ -1.66
HPS1Q92902 HSPE1P21-201ENST00000438283 308 ntBASIC4.7□□□□□ -1.66
HPS1Q92902 IGKV3D-7-201ENST00000443397 384 ntAPPRIS P1 BASIC4.7□□□□□ -1.66
HPS1Q92902 RPL23AP14-201ENST00000468281 468 ntBASIC4.7□□□□□ -1.66
HPS1Q92902 SNRPGP7-201ENST00000469016 106 ntBASIC4.7□□□□□ -1.66
HPS1Q92902 AC087362.2-201ENST00000529325 256 ntTSL 3 BASIC4.7□□□□□ -1.66
HPS1Q92902 AC024909.1-201ENST00000549278 599 ntTSL 4 BASIC4.7□□□□□ -1.66
HPS1Q92902 LINC00933-203ENST00000559812 219 ntBASIC4.7□□□□□ -1.66
HPS1Q92902 AC044860.2-201ENST00000561005 179 ntBASIC4.7□□□□□ -1.66
HPS1Q92902 AC012616.1-201ENST00000600294 197 ntBASIC4.7□□□□□ -1.66
HPS1Q92902 AC026523.1-201ENST00000617221 490 ntTSL 5 BASIC4.7□□□□□ -1.66
HPS1Q92902 AC132068.1-201ENST00000623805 459 ntBASIC4.7□□□□□ -1.66
HPS1Q92902 LINC01002-227ENST00000633363 541 ntTSL 1 (best) BASIC4.7□□□□□ -1.66
HPS1Q92902 ATP7A-202ENST00000343533 8289 ntTSL 5 BASIC4.7□□□□□ -1.66
HPS1Q92902 DNAH8-205ENST00000449981 12940 ntTSL 5 BASIC4.7□□□□□ -1.66
HPS1Q92902 RBM39-201ENST00000253363 2488 ntAPPRIS P4 TSL 1 (best) BASIC4.7□□□□□ -1.66
HPS1Q92902 CDH8-205ENST00000577730 8009 ntTSL 5 BASIC4.69□□□□□ -1.66
Retrieved 100 of 98,524 protein–RNA pairs in 125.3 ms