Protein–RNA interactions for Protein: Q8TAU0

NKX2-3, Homeobox protein Nkx-2.3, humanhuman

Predictions only

Length 364 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NKX2-3Q8TAU0 MUC2-202ENST00000613187 4845 ntBASIC5.4□□□□□ -1.54
NKX2-3Q8TAU0 AC092650.1-201ENST00000447571 1808 ntTSL 1 (best) BASIC5.4□□□□□ -1.54
NKX2-3Q8TAU0 SNORD115-8-201ENST00000363856 82 ntBASIC5.4□□□□□ -1.54
NKX2-3Q8TAU0 SNORD115-38-201ENST00000365037 82 ntBASIC5.4□□□□□ -1.54
NKX2-3Q8TAU0 UBBP2-201ENST00000376781 231 ntBASIC5.4□□□□□ -1.54
NKX2-3Q8TAU0 U8.10-201ENST00000384260 133 ntBASIC5.4□□□□□ -1.54
NKX2-3Q8TAU0 RNU6ATAC5P-201ENST00000388104 126 ntBASIC5.4□□□□□ -1.54
NKX2-3Q8TAU0 RNU6-1275P-201ENST00000391087 107 ntBASIC5.4□□□□□ -1.54
NKX2-3Q8TAU0 MTHFD2P2-201ENST00000407725 247 ntBASIC5.4□□□□□ -1.54
NKX2-3Q8TAU0 SNORA11.1-201ENST00000408133 129 ntBASIC5.4□□□□□ -1.54
NKX2-3Q8TAU0 RNU6-1199P-201ENST00000411249 104 ntBASIC5.4□□□□□ -1.54
NKX2-3Q8TAU0 RPL36AP10-201ENST00000421785 322 ntBASIC5.4□□□□□ -1.54
NKX2-3Q8TAU0 Z74021.1-201ENST00000423610 407 ntBASIC5.4□□□□□ -1.54
NKX2-3Q8TAU0 LINC00630-205ENST00000440496 2101 ntTSL 1 (best) BASIC5.4□□□□□ -1.54
NKX2-3Q8TAU0 RPL23AP93-201ENST00000440847 484 ntBASIC5.4□□□□□ -1.54
NKX2-3Q8TAU0 RNU6-58P-201ENST00000517143 103 ntBASIC5.4□□□□□ -1.54
NKX2-3Q8TAU0 AC016256.1-201ENST00000547971 354 ntBASIC5.4□□□□□ -1.54
NKX2-3Q8TAU0 MIR4472-2-201ENST00000582069 67 ntBASIC5.4□□□□□ -1.54
NKX2-3Q8TAU0 AC006272.2-201ENST00000594725 163 ntBASIC5.4□□□□□ -1.54
NKX2-3Q8TAU0 AL670379.3-201ENST00000605040 251 ntBASIC5.4□□□□□ -1.54
NKX2-3Q8TAU0 AL138963.2-201ENST00000605137 226 ntBASIC5.4□□□□□ -1.54
NKX2-3Q8TAU0 ARF4P1-201ENST00000605447 541 ntBASIC5.4□□□□□ -1.54
NKX2-3Q8TAU0 AC006133.1-201ENST00000617106 264 ntBASIC5.4□□□□□ -1.54
NKX2-3Q8TAU0 MIR6891-201ENST00000618788 93 ntBASIC5.4□□□□□ -1.54
NKX2-3Q8TAU0 AL445567.2-201ENST00000618935 498 ntBASIC5.4□□□□□ -1.54
NKX2-3Q8TAU0 CTAGE5-208ENST00000553352 3441 ntTSL 1 (best) BASIC5.4□□□□□ -1.55
NKX2-3Q8TAU0 ERGIC2-201ENST00000360150 5014 ntAPPRIS P1 TSL 1 (best) BASIC5.4□□□□□ -1.55
NKX2-3Q8TAU0 AC008555.8-201ENST00000623602 2168 ntBASIC5.39□□□□□ -1.55
NKX2-3Q8TAU0 TFPI-201ENST00000233156 3885 ntAPPRIS P1 TSL 1 (best) BASIC5.39□□□□□ -1.55
NKX2-3Q8TAU0 AC025031.4-201ENST00000621248 3271 ntBASIC5.39□□□□□ -1.55
NKX2-3Q8TAU0 TTC3-204ENST00000399017 10363 ntAPPRIS P1 TSL 1 (best) BASIC5.39□□□□□ -1.55
NKX2-3Q8TAU0 Y_RNA.101-201ENST00000363154 102 ntBASIC5.39□□□□□ -1.55
NKX2-3Q8TAU0 RN7SKP280-201ENST00000364196 304 ntBASIC5.39□□□□□ -1.55
NKX2-3Q8TAU0 CRP-203ENST00000368111 512 ntTSL 3 BASIC5.39□□□□□ -1.55
NKX2-3Q8TAU0 BPY2-202ENST00000382585 321 ntAPPRIS P5 TSL 1 (best) BASIC5.39□□□□□ -1.55
NKX2-3Q8TAU0 RNU6-763P-201ENST00000390865 106 ntBASIC5.39□□□□□ -1.55
NKX2-3Q8TAU0 SNORA68.2-201ENST00000391263 128 ntBASIC5.39□□□□□ -1.55
NKX2-3Q8TAU0 AC009237.10-201ENST00000414112 510 ntBASIC5.39□□□□□ -1.55
NKX2-3Q8TAU0 AL356387.2-201ENST00000422272 243 ntBASIC5.39□□□□□ -1.55
NKX2-3Q8TAU0 TAB3-AS2-201ENST00000445240 292 ntTSL 5 BASIC5.39□□□□□ -1.55
NKX2-3Q8TAU0 RNU6-772P-201ENST00000516042 105 ntBASIC5.39□□□□□ -1.55
NKX2-3Q8TAU0 SNORA67.7-201ENST00000516664 135 ntBASIC5.39□□□□□ -1.55
NKX2-3Q8TAU0 RNU6-537P-201ENST00000517277 103 ntBASIC5.39□□□□□ -1.55
NKX2-3Q8TAU0 DEFB117-201ENST00000602356 141 ntBASIC5.39□□□□□ -1.55
NKX2-3Q8TAU0 BPY2B-204ENST00000615850 321 ntAPPRIS P5 TSL 1 (best) BASIC5.39□□□□□ -1.55
NKX2-3Q8TAU0 BPY2C-204ENST00000618574 321 ntAPPRIS P5 TSL 1 (best) BASIC5.39□□□□□ -1.55
NKX2-3Q8TAU0 LUZP2-207ENST00000533227 5016 ntTSL 1 (best) BASIC5.39□□□□□ -1.55
NKX2-3Q8TAU0 CUL1P1-201ENST00000509510 2425 ntBASIC5.39□□□□□ -1.55
NKX2-3Q8TAU0 HEATR5A-203ENST00000543095 7840 ntAPPRIS P1 TSL 5 BASIC5.39□□□□□ -1.55
NKX2-3Q8TAU0 EPHA3-202ENST00000452448 2546 ntTSL 1 (best) BASIC5.39□□□□□ -1.55
NKX2-3Q8TAU0 SPART-202ENST00000438666 4789 ntAPPRIS P1 TSL 1 (best) BASIC5.39□□□□□ -1.55
NKX2-3Q8TAU0 ASNSP1-201ENST00000518311 1939 ntBASIC5.38□□□□□ -1.55
NKX2-3Q8TAU0 AL022322.2-201ENST00000624072 20397 ntBASIC5.38□□□□□ -1.55
NKX2-3Q8TAU0 LINC01091-203ENST00000514823 5262 ntTSL 1 (best) BASIC5.38□□□□□ -1.55
NKX2-3Q8TAU0 ZNF660-201ENST00000322734 5834 ntAPPRIS P1 TSL 2 BASIC5.38□□□□□ -1.55
NKX2-3Q8TAU0 MGAT4C-211ENST00000621808 2582 ntAPPRIS P1 TSL 1 (best) BASIC5.38□□□□□ -1.55
NKX2-3Q8TAU0 SLC17A4-201ENST00000377905 3616 ntAPPRIS P1 TSL 1 (best) BASIC5.38□□□□□ -1.55
NKX2-3Q8TAU0 GRID2-208ENST00000611049 4844 ntTSL 1 (best) BASIC5.38□□□□□ -1.55
NKX2-3Q8TAU0 AC004057.1-202ENST00000356247 284 ntTSL 3 BASIC5.38□□□□□ -1.55
NKX2-3Q8TAU0 U8.6-201ENST00000364939 135 ntBASIC5.38□□□□□ -1.55
NKX2-3Q8TAU0 SNORA71.2-201ENST00000364941 134 ntBASIC5.38□□□□□ -1.55
NKX2-3Q8TAU0 RNU6-915P-201ENST00000364943 103 ntBASIC5.38□□□□□ -1.55
NKX2-3Q8TAU0 RNU6-407P-201ENST00000365280 104 ntBASIC5.38□□□□□ -1.55
NKX2-3Q8TAU0 Y_RNA.388-201ENST00000383919 113 ntBASIC5.38□□□□□ -1.55
NKX2-3Q8TAU0 SNORD96B-201ENST00000386148 79 ntBASIC5.38□□□□□ -1.55
NKX2-3Q8TAU0 MIR670-201ENST00000390142 98 ntBASIC5.38□□□□□ -1.55
NKX2-3Q8TAU0 PHBP16-201ENST00000446318 950 ntBASIC5.38□□□□□ -1.55
NKX2-3Q8TAU0 AL590399.6-201ENST00000446396 307 ntBASIC5.38□□□□□ -1.55
NKX2-3Q8TAU0 U8.19-201ENST00000459095 133 ntBASIC5.38□□□□□ -1.55
NKX2-3Q8TAU0 snoU13.3-201ENST00000459441 104 ntBASIC5.38□□□□□ -1.55
NKX2-3Q8TAU0 MIR3158-1-201ENST00000583596 81 ntBASIC5.38□□□□□ -1.55
NKX2-3Q8TAU0 AL357075.2-201ENST00000614906 189 ntBASIC5.38□□□□□ -1.55
NKX2-3Q8TAU0 RUVBL2-213ENST00000639391 120 ntTSL 5 BASIC5.38□□□□□ -1.55
NKX2-3Q8TAU0 CFAP47-203ENST00000378653 9943 ntAPPRIS P2 TSL 5 BASIC5.38□□□□□ -1.55
NKX2-3Q8TAU0 SCN3A-203ENST00000409101 6599 ntAPPRIS ALT1 TSL 1 (best) BASIC5.38□□□□□ -1.55
NKX2-3Q8TAU0 LINC02432-202ENST00000509161 2839 ntTSL 2 BASIC5.38□□□□□ -1.55
NKX2-3Q8TAU0 KAT6B-201ENST00000287239 8287 ntAPPRIS P3 TSL 1 (best) BASIC5.37□□□□□ -1.55
NKX2-3Q8TAU0 MTND5P35-201ENST00000557537 1720 ntBASIC5.37□□□□□ -1.55
NKX2-3Q8TAU0 HERC1-201ENST00000443617 15137 ntAPPRIS P1 TSL 1 (best) BASIC5.37□□□□□ -1.55
NKX2-3Q8TAU0 ZNF137P-201ENST00000456718 1920 ntBASIC5.37□□□□□ -1.55
NKX2-3Q8TAU0 SNORA62.3-201ENST00000365110 153 ntBASIC5.37□□□□□ -1.55
NKX2-3Q8TAU0 RNU6-643P-201ENST00000384018 107 ntBASIC5.37□□□□□ -1.55
NKX2-3Q8TAU0 SNORD116-21-201ENST00000384507 92 ntBASIC5.37□□□□□ -1.55
NKX2-3Q8TAU0 SNORA8.3-201ENST00000384679 139 ntBASIC5.37□□□□□ -1.55
NKX2-3Q8TAU0 SNORA40C-201ENST00000391285 128 ntBASIC5.37□□□□□ -1.55
NKX2-3Q8TAU0 AL360175.1-201ENST00000426547 285 ntTSL 5 BASIC5.37□□□□□ -1.55
NKX2-3Q8TAU0 AL031737.1-201ENST00000450125 223 ntBASIC5.37□□□□□ -1.55
NKX2-3Q8TAU0 HSPE1P13-201ENST00000451143 297 ntBASIC5.37□□□□□ -1.55
NKX2-3Q8TAU0 AC108751.2-201ENST00000469993 231 ntBASIC5.37□□□□□ -1.55
NKX2-3Q8TAU0 AC092666.1-201ENST00000492054 573 ntTSL 4 BASIC5.37□□□□□ -1.55
NKX2-3Q8TAU0 LINC02017-201ENST00000496829 474 ntTSL 3 BASIC5.37□□□□□ -1.55
NKX2-3Q8TAU0 Y_RNA.757-201ENST00000578934 114 ntBASIC5.37□□□□□ -1.55
NKX2-3Q8TAU0 MIR4444-1-201ENST00000581696 74 ntBASIC5.37□□□□□ -1.55
NKX2-3Q8TAU0 MIR4444-2-201ENST00000584390 74 ntBASIC5.37□□□□□ -1.55
NKX2-3Q8TAU0 MIR8069-1-201ENST00000616627 86 ntBASIC5.37□□□□□ -1.55
NKX2-3Q8TAU0 U73479.1-201ENST00000618062 168 ntBASIC5.37□□□□□ -1.55
NKX2-3Q8TAU0 MIR6075-201ENST00000620782 95 ntBASIC5.37□□□□□ -1.55
NKX2-3Q8TAU0 AL023881.1-201ENST00000621088 301 ntBASIC5.37□□□□□ -1.55
NKX2-3Q8TAU0 MIR8069-2-201ENST00000621412 86 ntBASIC5.37□□□□□ -1.55
NKX2-3Q8TAU0 RNA5SP196-201ENST00000625967 102 ntBASIC5.37□□□□□ -1.55
Retrieved 100 of 98,524 protein–RNA pairs in 133.2 ms