Protein–RNA interactions for Protein: Q8NI28

LINC01006, Putative uncharacterized protein encoded by LINC01006, humanhuman

Predictions only

Length 216 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01006Q8NI28 FNBP1L-203ENST00000370253 3889 ntAPPRIS ALT1 TSL 5 BASIC2.09□□□□□ -2.08
LINC01006Q8NI28 ACTR6-212ENST00000552376 1659 ntTSL 5 BASIC2.09□□□□□ -2.08
LINC01006Q8NI28 AC092435.3-201ENST00000565538 3654 ntBASIC2.09□□□□□ -2.08
LINC01006Q8NI28 LIPI-203ENST00000536861 1529 ntAPPRIS ALT2 TSL 1 (best) BASIC2.08□□□□□ -2.08
LINC01006Q8NI28 AC008264.2-201ENST00000610193 3731 ntBASIC2.08□□□□□ -2.08
LINC01006Q8NI28 LRRC39-201ENST00000342895 1881 ntAPPRIS P1 TSL 5 BASIC2.08□□□□□ -2.08
LINC01006Q8NI28 CUL3-204ENST00000409777 3147 ntTSL 1 (best) BASIC2.08□□□□□ -2.08
LINC01006Q8NI28 RNU6-778P-201ENST00000363269 103 ntBASIC2.08□□□□□ -2.08
LINC01006Q8NI28 RNU6-371P-201ENST00000364283 108 ntBASIC2.08□□□□□ -2.08
LINC01006Q8NI28 MDM4-202ENST00000367180 547 ntTSL 3 BASIC2.08□□□□□ -2.08
LINC01006Q8NI28 DEFB119-202ENST00000376315 324 ntAPPRIS ALT2 TSL 1 (best) BASIC2.08□□□□□ -2.08
LINC01006Q8NI28 RNU6-38P-201ENST00000384085 107 ntBASIC2.08□□□□□ -2.08
LINC01006Q8NI28 SNORA70B-201ENST00000384210 135 ntBASIC2.08□□□□□ -2.08
LINC01006Q8NI28 MIR514A2-201ENST00000385131 88 ntBASIC2.08□□□□□ -2.08
LINC01006Q8NI28 MIR514A3-201ENST00000385132 88 ntBASIC2.08□□□□□ -2.08
LINC01006Q8NI28 MIR301A-201ENST00000385261 86 ntBASIC2.08□□□□□ -2.08
LINC01006Q8NI28 SNORD70.1-201ENST00000391007 85 ntBASIC2.08□□□□□ -2.08
LINC01006Q8NI28 MDM2-210ENST00000393413 657 ntTSL 1 (best) BASIC2.08□□□□□ -2.08
LINC01006Q8NI28 RPS4XP7-201ENST00000406274 780 ntBASIC2.08□□□□□ -2.08
LINC01006Q8NI28 OFD1P1Y-201ENST00000411756 1225 ntBASIC2.08□□□□□ -2.08
LINC01006Q8NI28 RPL30P16-201ENST00000419341 429 ntBASIC2.08□□□□□ -2.08
LINC01006Q8NI28 RBM6-203ENST00000421682 684 ntTSL 2 BASIC2.08□□□□□ -2.08
LINC01006Q8NI28 AC007179.2-207ENST00000435557 556 ntTSL 4 BASIC2.08□□□□□ -2.08
LINC01006Q8NI28 AL714022.1-201ENST00000439897 151 ntBASIC2.08□□□□□ -2.08
LINC01006Q8NI28 DARS-AS1-205ENST00000444649 558 ntTSL 3 BASIC2.08□□□□□ -2.08
LINC01006Q8NI28 AL513124.1-201ENST00000450410 614 ntBASIC2.08□□□□□ -2.08
LINC01006Q8NI28 MTND3P16-201ENST00000452205 344 ntBASIC2.08□□□□□ -2.08
LINC01006Q8NI28 RNU6-333P-201ENST00000459117 107 ntBASIC2.08□□□□□ -2.08
LINC01006Q8NI28 RN7SL75P-201ENST00000461926 281 ntBASIC2.08□□□□□ -2.08
LINC01006Q8NI28 RPL21P93-201ENST00000480465 489 ntBASIC2.08□□□□□ -2.08
LINC01006Q8NI28 AC006483.1-201ENST00000487308 313 ntBASIC2.08□□□□□ -2.08
LINC01006Q8NI28 MTCYBP18-201ENST00000501056 747 ntBASIC2.08□□□□□ -2.08
LINC01006Q8NI28 MTND3P25-201ENST00000509243 135 ntBASIC2.08□□□□□ -2.08
LINC01006Q8NI28 LINC02220-201ENST00000510065 270 ntTSL 5 BASIC2.08□□□□□ -2.08
LINC01006Q8NI28 AC114316.1-201ENST00000511323 278 ntTSL 5 BASIC2.08□□□□□ -2.08
LINC01006Q8NI28 RNU1-86P-201ENST00000516108 154 ntBASIC2.08□□□□□ -2.08
LINC01006Q8NI28 RNU1-107P-201ENST00000516617 154 ntBASIC2.08□□□□□ -2.08
LINC01006Q8NI28 SNORA31.19-201ENST00000517079 126 ntBASIC2.08□□□□□ -2.08
LINC01006Q8NI28 RPL7P20-201ENST00000520308 745 ntBASIC2.08□□□□□ -2.08
LINC01006Q8NI28 AL137161.1-201ENST00000532231 390 ntBASIC2.08□□□□□ -2.08
LINC01006Q8NI28 MDM2-233ENST00000545204 398 ntTSL 5 BASIC2.08□□□□□ -2.08
LINC01006Q8NI28 AL512791.1-201ENST00000555853 300 ntTSL 3 BASIC2.08□□□□□ -2.08
LINC01006Q8NI28 AL133241.1-201ENST00000556832 487 ntBASIC2.08□□□□□ -2.08
LINC01006Q8NI28 MIR1273C-201ENST00000578669 77 ntBASIC2.08□□□□□ -2.08
LINC01006Q8NI28 SNORD53-201ENST00000579969 78 ntBASIC2.08□□□□□ -2.08
LINC01006Q8NI28 MIR4801-201ENST00000582704 82 ntBASIC2.08□□□□□ -2.08
LINC01006Q8NI28 HMGN2P15-201ENST00000585707 270 ntBASIC2.08□□□□□ -2.08
LINC01006Q8NI28 AC004852.3-201ENST00000614131 326 ntBASIC2.08□□□□□ -2.08
LINC01006Q8NI28 AC064859.1-201ENST00000624741 174 ntBASIC2.08□□□□□ -2.08
LINC01006Q8NI28 DMD-201ENST00000288447 3856 ntTSL 1 (best) BASIC2.08□□□□□ -2.08
LINC01006Q8NI28 MIR133A1HG-202ENST00000581072 4226 ntTSL 1 (best) BASIC2.08□□□□□ -2.08
LINC01006Q8NI28 IL33-201ENST00000381434 2641 ntAPPRIS P1 TSL 1 (best) BASIC2.07□□□□□ -2.08
LINC01006Q8NI28 CBLL1-201ENST00000222597 2003 ntAPPRIS ALT1 TSL 1 (best) BASIC2.07□□□□□ -2.08
LINC01006Q8NI28 ATF2-204ENST00000409437 3697 ntTSL 5 BASIC2.07□□□□□ -2.08
LINC01006Q8NI28 AGTR1-204ENST00000418473 2071 ntTSL 5 BASIC2.07□□□□□ -2.08
LINC01006Q8NI28 TTC6-201ENST00000267368 1681 ntTSL 5 BASIC2.07□□□□□ -2.08
LINC01006Q8NI28 RPL9P7-201ENST00000330965 580 ntBASIC2.07□□□□□ -2.08
LINC01006Q8NI28 SNORD62.1-201ENST00000362541 86 ntBASIC2.07□□□□□ -2.08
LINC01006Q8NI28 RNU4-66P-201ENST00000365199 138 ntBASIC2.07□□□□□ -2.08
LINC01006Q8NI28 Y_RNA.378-201ENST00000365652 113 ntBASIC2.07□□□□□ -2.08
LINC01006Q8NI28 RNU6-395P-201ENST00000365662 106 ntBASIC2.07□□□□□ -2.08
LINC01006Q8NI28 Y_RNA.390-201ENST00000383932 102 ntBASIC2.07□□□□□ -2.08
LINC01006Q8NI28 RNU6-1179P-201ENST00000384667 107 ntBASIC2.07□□□□□ -2.08
LINC01006Q8NI28 PIGP-205ENST00000399103 656 ntAPPRIS P1 TSL 1 (best) BASIC2.07□□□□□ -2.08
LINC01006Q8NI28 RNU6ATAC40P-201ENST00000408580 137 ntBASIC2.07□□□□□ -2.08
LINC01006Q8NI28 AL160162.1-202ENST00000417654 244 ntTSL 3 BASIC2.07□□□□□ -2.08
LINC01006Q8NI28 AL731684.2-201ENST00000426839 333 ntTSL 5 BASIC2.07□□□□□ -2.08
LINC01006Q8NI28 AL592466.1-201ENST00000428346 307 ntTSL 5 BASIC2.07□□□□□ -2.08
LINC01006Q8NI28 AC244505.4-201ENST00000434905 287 ntBASIC2.07□□□□□ -2.08
LINC01006Q8NI28 AL121890.1-201ENST00000435457 205 ntBASIC2.07□□□□□ -2.08
LINC01006Q8NI28 HMGB1P31-201ENST00000437242 427 ntBASIC2.07□□□□□ -2.08
LINC01006Q8NI28 AF274573.2-201ENST00000437772 520 ntTSL 5 BASIC2.07□□□□□ -2.08
LINC01006Q8NI28 SSXP5-201ENST00000443473 287 ntBASIC2.07□□□□□ -2.08
LINC01006Q8NI28 ZEB1-AS1-204ENST00000450834 576 ntTSL 3 BASIC2.07□□□□□ -2.08
LINC01006Q8NI28 AL583843.1-201ENST00000456070 346 ntBASIC2.07□□□□□ -2.08
LINC01006Q8NI28 RNU7-23P-201ENST00000459465 62 ntBASIC2.07□□□□□ -2.08
LINC01006Q8NI28 RPL21P99-201ENST00000480369 423 ntBASIC2.07□□□□□ -2.08
LINC01006Q8NI28 RPS27AP10-201ENST00000496103 208 ntBASIC2.07□□□□□ -2.08
LINC01006Q8NI28 AC026780.2-201ENST00000503489 730 ntTSL 5 BASIC2.07□□□□□ -2.08
LINC01006Q8NI28 LINC01333-201ENST00000508083 724 ntTSL 1 (best) BASIC2.07□□□□□ -2.08
LINC01006Q8NI28 RNA5SP282-201ENST00000516355 108 ntBASIC2.07□□□□□ -2.08
LINC01006Q8NI28 RNU6-572P-201ENST00000516724 80 ntBASIC2.07□□□□□ -2.08
LINC01006Q8NI28 AC104211.1-202ENST00000521307 866 ntTSL 3 BASIC2.07□□□□□ -2.08
LINC01006Q8NI28 AP000462.2-203ENST00000540545 715 ntTSL 5 BASIC2.07□□□□□ -2.08
LINC01006Q8NI28 LINC02309-201ENST00000553679 207 ntTSL 3 BASIC2.07□□□□□ -2.08
LINC01006Q8NI28 AC027176.1-201ENST00000560204 514 ntBASIC2.07□□□□□ -2.08
LINC01006Q8NI28 MIR3605-201ENST00000583214 100 ntBASIC2.07□□□□□ -2.08
LINC01006Q8NI28 MIR4506-201ENST00000584693 77 ntBASIC2.07□□□□□ -2.08
LINC01006Q8NI28 AC012119.1-201ENST00000603184 222 ntBASIC2.07□□□□□ -2.08
LINC01006Q8NI28 DISC2.1-201ENST00000612827 205 ntBASIC2.07□□□□□ -2.08
LINC01006Q8NI28 AC002553.4-201ENST00000616896 331 ntBASIC2.07□□□□□ -2.08
LINC01006Q8NI28 HOTTIP_4.1-201ENST00000618195 165 ntBASIC2.07□□□□□ -2.08
LINC01006Q8NI28 uc_338.11-201ENST00000619132 160 ntBASIC2.07□□□□□ -2.08
LINC01006Q8NI28 OR4C16-201ENST00000623907 933 ntAPPRIS P1 BASIC2.07□□□□□ -2.08
LINC01006Q8NI28 CTSLP2-204ENST00000629029 392 ntBASIC2.07□□□□□ -2.08
LINC01006Q8NI28 AC093831.2-201ENST00000624393 3427 ntBASIC2.07□□□□□ -2.08
LINC01006Q8NI28 AC008669.1-201ENST00000565823 2178 ntBASIC2.07□□□□□ -2.08
LINC01006Q8NI28 CREBRF-201ENST00000296953 7778 ntAPPRIS P1 TSL 1 (best) BASIC2.07□□□□□ -2.08
LINC01006Q8NI28 ZNF676-201ENST00000397121 2944 ntAPPRIS P1 TSL 2 BASIC2.07□□□□□ -2.08
LINC01006Q8NI28 HERC5-203ENST00000508159 2243 ntTSL 2 BASIC2.06□□□□□ -2.08
Retrieved 100 of 98,524 protein–RNA pairs in 123.2 ms