Protein–RNA interactions for Protein: Q8IV63

VRK3, Inactive serine/threonine-protein kinase VRK3, humanhuman

Predictions only

Length 474 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VRK3Q8IV63 AL139811.1-201ENST00000424779 2299 ntBASIC3.49□□□□□ -1.85
VRK3Q8IV63 MACF1-204ENST00000372915 23440 ntAPPRIS ALT2 TSL 5 BASIC3.49□□□□□ -1.85
VRK3Q8IV63 RXFP1-205ENST00000448688 3861 ntTSL 1 (best) BASIC3.48□□□□□ -1.85
VRK3Q8IV63 TNPO1P3-201ENST00000436471 2662 ntBASIC3.48□□□□□ -1.85
VRK3Q8IV63 DOCK7-202ENST00000340370 6731 ntAPPRIS P3 TSL 2 BASIC3.48□□□□□ -1.85
VRK3Q8IV63 CKAP5-201ENST00000312055 6532 ntTSL 5 BASIC3.48□□□□□ -1.85
VRK3Q8IV63 IL36B-202ENST00000327407 1052 ntAPPRIS P1 TSL 1 (best) BASIC3.48□□□□□ -1.85
VRK3Q8IV63 Y_RNA.117-201ENST00000363294 101 ntBASIC3.48□□□□□ -1.85
VRK3Q8IV63 AL359837.1-201ENST00000381357 287 ntBASIC3.48□□□□□ -1.85
VRK3Q8IV63 Y_RNA.785-201ENST00000384290 109 ntBASIC3.48□□□□□ -1.85
VRK3Q8IV63 RNU6-790P-201ENST00000384479 105 ntBASIC3.48□□□□□ -1.85
VRK3Q8IV63 MIR625-201ENST00000385047 85 ntBASIC3.48□□□□□ -1.85
VRK3Q8IV63 TRAV24-201ENST00000390453 343 ntAPPRIS P1 BASIC3.48□□□□□ -1.85
VRK3Q8IV63 U3.39-201ENST00000408569 239 ntBASIC3.48□□□□□ -1.85
VRK3Q8IV63 RN7SKP53-201ENST00000411337 315 ntBASIC3.48□□□□□ -1.85
VRK3Q8IV63 MTCO3P19-201ENST00000415864 321 ntBASIC3.48□□□□□ -1.85
VRK3Q8IV63 LINC01349-201ENST00000416343 497 ntTSL 3 BASIC3.48□□□□□ -1.85
VRK3Q8IV63 HMGB1P27-201ENST00000431429 603 ntBASIC3.48□□□□□ -1.85
VRK3Q8IV63 AC092573.2-202ENST00000437243 336 ntTSL 3 BASIC3.48□□□□□ -1.85
VRK3Q8IV63 CXorf51B-201ENST00000438525 436 ntAPPRIS P1 TSL 2 BASIC3.48□□□□□ -1.85
VRK3Q8IV63 RPL26P6-201ENST00000440913 438 ntBASIC3.48□□□□□ -1.85
VRK3Q8IV63 SNRPGP5-201ENST00000456003 220 ntBASIC3.48□□□□□ -1.85
VRK3Q8IV63 LINC01399-202ENST00000458450 244 ntBASIC3.48□□□□□ -1.85
VRK3Q8IV63 AC022493.1-201ENST00000492984 337 ntBASIC3.48□□□□□ -1.85
VRK3Q8IV63 LINC01337-201ENST00000515871 440 ntTSL 3 BASIC3.48□□□□□ -1.85
VRK3Q8IV63 RN7SKP18-201ENST00000516005 275 ntBASIC3.48□□□□□ -1.85
VRK3Q8IV63 RNU1-86P-201ENST00000516108 154 ntBASIC3.48□□□□□ -1.85
VRK3Q8IV63 RNU1-107P-201ENST00000516617 154 ntBASIC3.48□□□□□ -1.85
VRK3Q8IV63 RNU6-579P-201ENST00000516879 102 ntBASIC3.48□□□□□ -1.85
VRK3Q8IV63 AC022080.3-201ENST00000544433 482 ntBASIC3.48□□□□□ -1.85
VRK3Q8IV63 NKAIN2-205ENST00000546092 148 ntTSL 5 BASIC3.48□□□□□ -1.85
VRK3Q8IV63 AC126323.6-201ENST00000561701 451 ntTSL 3 BASIC3.48□□□□□ -1.85
VRK3Q8IV63 AC087463.1-201ENST00000568541 556 ntTSL 2 BASIC3.48□□□□□ -1.85
VRK3Q8IV63 MIR5696-201ENST00000578474 85 ntBASIC3.48□□□□□ -1.85
VRK3Q8IV63 MIR3922-201ENST00000585192 84 ntBASIC3.48□□□□□ -1.85
VRK3Q8IV63 SNORD39.4-201ENST00000620099 78 ntBASIC3.48□□□□□ -1.85
VRK3Q8IV63 AL512643.1-201ENST00000635735 524 ntBASIC3.48□□□□□ -1.85
VRK3Q8IV63 AC244205.2-202ENST00000635781 342 ntBASIC3.48□□□□□ -1.85
VRK3Q8IV63 AC009093.8-201ENST00000641769 292 ntBASIC3.48□□□□□ -1.85
VRK3Q8IV63 BIRC3-206ENST00000532808 4238 ntAPPRIS P1 TSL 5 BASIC3.48□□□□□ -1.85
VRK3Q8IV63 PNISR-201ENST00000369239 5112 ntAPPRIS P1 TSL 1 (best) BASIC3.48□□□□□ -1.85
VRK3Q8IV63 TET2-204ENST00000413648 4973 ntTSL 1 (best) BASIC3.48□□□□□ -1.85
VRK3Q8IV63 AC009812.4-201ENST00000569134 1805 ntBASIC3.47□□□□□ -1.85
VRK3Q8IV63 CFL2-202ENST00000341223 3131 ntAPPRIS P1 TSL 1 (best) BASIC3.47□□□□□ -1.85
VRK3Q8IV63 OTUD4P1-201ENST00000237841 3067 ntBASIC3.47□□□□□ -1.85
VRK3Q8IV63 CSNK1G3-203ENST00000361991 2424 ntAPPRIS P3 TSL 1 (best) BASIC3.47□□□□□ -1.85
VRK3Q8IV63 Y_RNA.20-201ENST00000362479 113 ntBASIC3.47□□□□□ -1.85
VRK3Q8IV63 SAR1AP2-201ENST00000392696 594 ntBASIC3.47□□□□□ -1.85
VRK3Q8IV63 MTATP6P4-201ENST00000427725 675 ntBASIC3.47□□□□□ -1.85
VRK3Q8IV63 AC091286.1-201ENST00000431233 461 ntBASIC3.47□□□□□ -1.85
VRK3Q8IV63 TRAPPC2P9-201ENST00000434556 343 ntBASIC3.47□□□□□ -1.85
VRK3Q8IV63 Z83839.2-201ENST00000436294 274 ntTSL 5 BASIC3.47□□□□□ -1.85
VRK3Q8IV63 LINC00448-201ENST00000438352 402 ntTSL 3 BASIC3.47□□□□□ -1.85
VRK3Q8IV63 AL445490.2-201ENST00000440492 441 ntTSL 3 BASIC3.47□□□□□ -1.85
VRK3Q8IV63 AL136097.1-201ENST00000456945 913 ntBASIC3.47□□□□□ -1.85
VRK3Q8IV63 SNORA84-201ENST00000459229 133 ntBASIC3.47□□□□□ -1.85
VRK3Q8IV63 RNU7-170P-201ENST00000459303 61 ntBASIC3.47□□□□□ -1.85
VRK3Q8IV63 AC106707.2-201ENST00000484182 374 ntBASIC3.47□□□□□ -1.85
VRK3Q8IV63 UBE2Q2P9-201ENST00000490086 202 ntBASIC3.47□□□□□ -1.85
VRK3Q8IV63 RNU6-138P-201ENST00000515952 107 ntBASIC3.47□□□□□ -1.85
VRK3Q8IV63 Y_RNA.700-201ENST00000516806 100 ntBASIC3.47□□□□□ -1.85
VRK3Q8IV63 SNORA40.15-201ENST00000516884 107 ntBASIC3.47□□□□□ -1.85
VRK3Q8IV63 RNU6-111P-201ENST00000517179 105 ntBASIC3.47□□□□□ -1.85
VRK3Q8IV63 UQCRB-202ENST00000517523 515 ntTSL 2 BASIC3.47□□□□□ -1.85
VRK3Q8IV63 SDHAF2-203ENST00000534878 523 ntTSL 2 BASIC3.47□□□□□ -1.85
VRK3Q8IV63 MIR1273C-201ENST00000578669 77 ntBASIC3.47□□□□□ -1.85
VRK3Q8IV63 MIR4738-201ENST00000579134 87 ntBASIC3.47□□□□□ -1.85
VRK3Q8IV63 AC012433.1-201ENST00000588916 398 ntBASIC3.47□□□□□ -1.85
VRK3Q8IV63 SDR42E1P4-201ENST00000620894 481 ntBASIC3.47□□□□□ -1.85
VRK3Q8IV63 AC130454.1-201ENST00000622948 401 ntBASIC3.47□□□□□ -1.85
VRK3Q8IV63 MTND5P6-201ENST00000422338 1798 ntBASIC3.47□□□□□ -1.85
VRK3Q8IV63 AC010733.2-201ENST00000589496 5702 ntBASIC3.47□□□□□ -1.85
VRK3Q8IV63 GEN1-201ENST00000317402 9854 ntAPPRIS P1 TSL 2 BASIC3.46□□□□□ -1.86
VRK3Q8IV63 XRCC4-205ENST00000511817 1636 ntAPPRIS P4 TSL 1 (best) BASIC3.46□□□□□ -1.86
VRK3Q8IV63 LBR-202ENST00000338179 3812 ntAPPRIS P1 TSL 5 BASIC3.46□□□□□ -1.86
VRK3Q8IV63 Y_RNA.183-201ENST00000363882 113 ntBASIC3.46□□□□□ -1.86
VRK3Q8IV63 CXorf65-201ENST00000374251 601 ntAPPRIS P1 TSL 5 BASIC3.46□□□□□ -1.86
VRK3Q8IV63 CLDN10-202ENST00000376855 701 ntTSL 2 BASIC3.46□□□□□ -1.86
VRK3Q8IV63 Y_RNA.477-201ENST00000384352 108 ntBASIC3.46□□□□□ -1.86
VRK3Q8IV63 SNORA51.11-201ENST00000384442 131 ntBASIC3.46□□□□□ -1.86
VRK3Q8IV63 SNORD58.1-201ENST00000391313 66 ntBASIC3.46□□□□□ -1.86
VRK3Q8IV63 AL513475.1-201ENST00000406602 315 ntBASIC3.46□□□□□ -1.86
VRK3Q8IV63 AL096701.2-201ENST00000416920 238 ntBASIC3.46□□□□□ -1.86
VRK3Q8IV63 AC069079.1-201ENST00000419889 400 ntTSL 3 BASIC3.46□□□□□ -1.86
VRK3Q8IV63 AC002075.2-201ENST00000425207 252 ntBASIC3.46□□□□□ -1.86
VRK3Q8IV63 AC006989.1-201ENST00000427212 131 ntBASIC3.46□□□□□ -1.86
VRK3Q8IV63 AC006946.1-201ENST00000429106 328 ntBASIC3.46□□□□□ -1.86
VRK3Q8IV63 CYCSP4-201ENST00000429682 331 ntBASIC3.46□□□□□ -1.86
VRK3Q8IV63 HSPD1P21-201ENST00000436541 245 ntBASIC3.46□□□□□ -1.86
VRK3Q8IV63 USP9YP7-201ENST00000436723 430 ntBASIC3.46□□□□□ -1.86
VRK3Q8IV63 RPS29P31-201ENST00000446147 164 ntBASIC3.46□□□□□ -1.86
VRK3Q8IV63 OR2AQ1P-201ENST00000451972 200 ntBASIC3.46□□□□□ -1.86
VRK3Q8IV63 USP9YP32-201ENST00000452432 430 ntBASIC3.46□□□□□ -1.86
VRK3Q8IV63 LINC01753-201ENST00000458145 631 ntTSL 3 BASIC3.46□□□□□ -1.86
VRK3Q8IV63 AL138787.2-202ENST00000479395 385 ntTSL 2 BASIC3.46□□□□□ -1.86
VRK3Q8IV63 RPS15AP34-201ENST00000487776 387 ntBASIC3.46□□□□□ -1.86
VRK3Q8IV63 GZMAP1-201ENST00000503054 631 ntBASIC3.46□□□□□ -1.86
VRK3Q8IV63 LINC02447-203ENST00000504402 292 ntTSL 3 BASIC3.46□□□□□ -1.86
VRK3Q8IV63 Y_RNA.673-201ENST00000516306 88 ntBASIC3.46□□□□□ -1.86
VRK3Q8IV63 SNORA67.7-201ENST00000516664 135 ntBASIC3.46□□□□□ -1.86
Retrieved 100 of 98,524 protein–RNA pairs in 132.2 ms