Protein–RNA interactions for Protein: Q6Q0C0

TRAF7, E3 ubiquitin-protein ligase TRAF7, humanhuman

Predictions only

Length 670 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRAF7Q6Q0C0 RPL39P29-201ENST00000447779 157 ntBASIC5.3□□□□□ -1.56
TRAF7Q6Q0C0 AC245047.8-201ENST00000456455 284 ntBASIC5.3□□□□□ -1.56
TRAF7Q6Q0C0 CFLAR-AS1-202ENST00000474886 223 ntTSL 3 BASIC5.3□□□□□ -1.56
TRAF7Q6Q0C0 AC011396.2-202ENST00000511390 375 ntTSL 3 BASIC5.3□□□□□ -1.56
TRAF7Q6Q0C0 RNU6-1114P-201ENST00000516022 107 ntBASIC5.3□□□□□ -1.56
TRAF7Q6Q0C0 SCARNA15.2-201ENST00000516409 127 ntBASIC5.3□□□□□ -1.56
TRAF7Q6Q0C0 MIR3921-201ENST00000577308 85 ntBASIC5.3□□□□□ -1.56
TRAF7Q6Q0C0 MIR5699-201ENST00000578903 90 ntBASIC5.3□□□□□ -1.56
TRAF7Q6Q0C0 AL356218.2-201ENST00000605264 187 ntBASIC5.3□□□□□ -1.56
TRAF7Q6Q0C0 RNA5SP108-201ENST00000605921 117 ntBASIC5.3□□□□□ -1.56
TRAF7Q6Q0C0 AC019206.1-201ENST00000621938 425 ntBASIC5.3□□□□□ -1.56
TRAF7Q6Q0C0 AC012640.5-201ENST00000623897 319 ntBASIC5.3□□□□□ -1.56
TRAF7Q6Q0C0 EPHA7-202ENST00000369303 6588 ntAPPRIS P1 TSL 1 (best) BASIC5.3□□□□□ -1.56
TRAF7Q6Q0C0 AC010329.5-201ENST00000623497 2174 ntBASIC5.3□□□□□ -1.56
TRAF7Q6Q0C0 MGAT4C-211ENST00000621808 2582 ntAPPRIS P1 TSL 1 (best) BASIC5.3□□□□□ -1.56
TRAF7Q6Q0C0 OBSCN-205ENST00000422127 24060 ntTSL 5 BASIC5.3□□□□□ -1.56
TRAF7Q6Q0C0 MYO3A-203ENST00000376302 2723 ntTSL 1 (best) BASIC5.3□□□□□ -1.56
TRAF7Q6Q0C0 CTSS-201ENST00000368985 4107 ntAPPRIS P1 TSL 1 (best) BASIC5.29□□□□□ -1.56
TRAF7Q6Q0C0 DOCK7-211ENST00000634264 6303 ntAPPRIS ALT2 TSL 5 BASIC5.29□□□□□ -1.56
TRAF7Q6Q0C0 PRTG-201ENST00000389286 11967 ntAPPRIS P1 TSL 1 (best) BASIC5.29□□□□□ -1.56
TRAF7Q6Q0C0 MIS12-201ENST00000381165 2505 ntAPPRIS P1 TSL 1 (best) BASIC5.29□□□□□ -1.56
TRAF7Q6Q0C0 ITCH-207ENST00000535650 2940 ntTSL 2 BASIC5.29□□□□□ -1.56
TRAF7Q6Q0C0 Y_RNA.313-201ENST00000365095 103 ntBASIC5.29□□□□□ -1.56
TRAF7Q6Q0C0 RNU6-497P-201ENST00000365316 104 ntBASIC5.29□□□□□ -1.56
TRAF7Q6Q0C0 RNA5SP235-201ENST00000365411 114 ntBASIC5.29□□□□□ -1.56
TRAF7Q6Q0C0 RNU6-1145P-201ENST00000384246 107 ntBASIC5.29□□□□□ -1.56
TRAF7Q6Q0C0 MIR10A-201ENST00000385043 110 ntBASIC5.29□□□□□ -1.56
TRAF7Q6Q0C0 MIR1290-201ENST00000408735 78 ntBASIC5.29□□□□□ -1.56
TRAF7Q6Q0C0 AL136985.1-201ENST00000424592 395 ntTSL 3 BASIC5.29□□□□□ -1.56
TRAF7Q6Q0C0 AL358472.1-201ENST00000431295 329 ntBASIC5.29□□□□□ -1.56
TRAF7Q6Q0C0 AL353742.1-201ENST00000453455 224 ntTSL 3 BASIC5.29□□□□□ -1.56
TRAF7Q6Q0C0 AC021205.2-201ENST00000480069 347 ntBASIC5.29□□□□□ -1.56
TRAF7Q6Q0C0 ARHGEF3-AS1-202ENST00000495939 336 ntTSL 3 BASIC5.29□□□□□ -1.56
TRAF7Q6Q0C0 RNA5SP290-201ENST00000517133 127 ntBASIC5.29□□□□□ -1.56
TRAF7Q6Q0C0 AC023575.1-201ENST00000580510 358 ntBASIC5.29□□□□□ -1.56
TRAF7Q6Q0C0 AL034408.1-202ENST00000636088 415 ntBASIC5.29□□□□□ -1.56
TRAF7Q6Q0C0 MEG8-223ENST00000638012 3757 ntTSL 5 BASIC5.29□□□□□ -1.56
TRAF7Q6Q0C0 NBPF10-202ENST00000617010 11630 ntTSL 5 BASIC5.29□□□□□ -1.56
TRAF7Q6Q0C0 PKHD1-202ENST00000371117 16282 ntAPPRIS P4 TSL 1 (best) BASIC5.29□□□□□ -1.56
TRAF7Q6Q0C0 USP8-201ENST00000307179 4243 ntAPPRIS P1 TSL 1 (best) BASIC5.29□□□□□ -1.56
TRAF7Q6Q0C0 MLH3-210ENST00000556257 4229 ntTSL 5 BASIC5.29□□□□□ -1.56
TRAF7Q6Q0C0 NEAT1-202ENST00000501122 22743 ntBASIC5.29□□□□□ -1.56
TRAF7Q6Q0C0 AC116096.1-201ENST00000566804 2314 ntBASIC5.29□□□□□ -1.56
TRAF7Q6Q0C0 OR8J2-201ENST00000641465 2883 ntAPPRIS P1 BASIC5.29□□□□□ -1.56
TRAF7Q6Q0C0 ING3-201ENST00000315870 3777 ntAPPRIS P1 TSL 1 (best) BASIC5.29□□□□□ -1.56
TRAF7Q6Q0C0 GABRG2-224ENST00000640574 3150 ntTSL 5 BASIC5.28□□□□□ -1.56
TRAF7Q6Q0C0 MYBPC1-202ENST00000361685 3871 ntAPPRIS ALT2 TSL 1 (best) BASIC5.28□□□□□ -1.56
TRAF7Q6Q0C0 SLC1A3-216ENST00000613445 4030 ntTSL 5 BASIC5.28□□□□□ -1.56
TRAF7Q6Q0C0 ZNF117-201ENST00000282869 9080 ntAPPRIS P1 TSL 1 (best) BASIC5.28□□□□□ -1.56
TRAF7Q6Q0C0 EPHA3-202ENST00000452448 2546 ntTSL 1 (best) BASIC5.28□□□□□ -1.56
TRAF7Q6Q0C0 DTWD2-201ENST00000304058 4365 ntTSL 1 (best) BASIC5.28□□□□□ -1.56
TRAF7Q6Q0C0 RNA5SP447-201ENST00000363749 119 ntBASIC5.28□□□□□ -1.56
TRAF7Q6Q0C0 RNU6-647P-201ENST00000364243 107 ntBASIC5.28□□□□□ -1.56
TRAF7Q6Q0C0 LST1-207ENST00000376092 285 ntTSL 1 (best) BASIC5.28□□□□□ -1.56
TRAF7Q6Q0C0 RNU6-1014P-201ENST00000383940 103 ntBASIC5.28□□□□□ -1.56
TRAF7Q6Q0C0 MIR329-1-201ENST00000385028 80 ntBASIC5.28□□□□□ -1.56
TRAF7Q6Q0C0 MT-TT-201ENST00000387460 66 ntBASIC5.28□□□□□ -1.56
TRAF7Q6Q0C0 AC091390.3-201ENST00000426478 338 ntBASIC5.28□□□□□ -1.56
TRAF7Q6Q0C0 AC079780.1-201ENST00000428259 207 ntBASIC5.28□□□□□ -1.56
TRAF7Q6Q0C0 FABP5P15-201ENST00000453566 214 ntBASIC5.28□□□□□ -1.56
TRAF7Q6Q0C0 RN7SL41P-201ENST00000476144 297 ntBASIC5.28□□□□□ -1.56
TRAF7Q6Q0C0 NIP7P2-201ENST00000485801 544 ntBASIC5.28□□□□□ -1.56
TRAF7Q6Q0C0 RPL23AP49-201ENST00000492925 468 ntBASIC5.28□□□□□ -1.56
TRAF7Q6Q0C0 AC091868.1-201ENST00000508746 304 ntBASIC5.28□□□□□ -1.56
TRAF7Q6Q0C0 RNA5SP230-201ENST00000517039 122 ntBASIC5.28□□□□□ -1.56
TRAF7Q6Q0C0 AC002428.2-201ENST00000522973 414 ntTSL 3 BASIC5.28□□□□□ -1.56
TRAF7Q6Q0C0 AC244502.1-203ENST00000541008 576 ntTSL 4 BASIC5.28□□□□□ -1.56
TRAF7Q6Q0C0 AC104002.1-201ENST00000557025 380 ntTSL 3 BASIC5.28□□□□□ -1.56
TRAF7Q6Q0C0 UBL5P4-201ENST00000562584 236 ntBASIC5.28□□□□□ -1.56
TRAF7Q6Q0C0 AC007012.1-201ENST00000567192 175 ntBASIC5.28□□□□□ -1.56
TRAF7Q6Q0C0 AC005255.1-201ENST00000593748 216 ntBASIC5.28□□□□□ -1.56
TRAF7Q6Q0C0 SNRPGP20-201ENST00000604477 205 ntBASIC5.28□□□□□ -1.56
TRAF7Q6Q0C0 AL360181.4-201ENST00000621752 134 ntBASIC5.28□□□□□ -1.56
TRAF7Q6Q0C0 AC006065.5-201ENST00000623427 349 ntBASIC5.28□□□□□ -1.56
TRAF7Q6Q0C0 AC048347.1-201ENST00000624621 427 ntBASIC5.28□□□□□ -1.56
TRAF7Q6Q0C0 AC068631.1-219ENST00000625826 668 ntTSL 5 BASIC5.28□□□□□ -1.56
TRAF7Q6Q0C0 RNF123-214ENST00000629802 207 ntTSL 5 BASIC5.28□□□□□ -1.56
TRAF7Q6Q0C0 MIR6830-201ENST00000636015 70 ntBASIC5.28□□□□□ -1.56
TRAF7Q6Q0C0 PLCB1-211ENST00000617005 6458 ntTSL 5 BASIC5.28□□□□□ -1.56
TRAF7Q6Q0C0 CDH19-201ENST00000262150 6341 ntAPPRIS P1 TSL 1 (best) BASIC5.28□□□□□ -1.56
TRAF7Q6Q0C0 AC018529.3-201ENST00000624212 2254 ntBASIC5.27□□□□□ -1.57
TRAF7Q6Q0C0 DENND4A-201ENST00000431932 5875 ntAPPRIS P1 TSL 1 (best) BASIC5.27□□□□□ -1.57
TRAF7Q6Q0C0 Y_RNA.120-201ENST00000363304 110 ntBASIC5.27□□□□□ -1.57
TRAF7Q6Q0C0 U3.9-201ENST00000363823 204 ntBASIC5.27□□□□□ -1.57
TRAF7Q6Q0C0 RNA5SP479-201ENST00000364858 117 ntBASIC5.27□□□□□ -1.57
TRAF7Q6Q0C0 APOA2-201ENST00000367990 474 ntAPPRIS P1 TSL 1 (best) BASIC5.27□□□□□ -1.57
TRAF7Q6Q0C0 GTSF1L-202ENST00000373005 459 ntAPPRIS ALT2 TSL 3 BASIC5.27□□□□□ -1.57
TRAF7Q6Q0C0 RNY3P5-201ENST00000384127 102 ntBASIC5.27□□□□□ -1.57
TRAF7Q6Q0C0 RNU6-281P-201ENST00000384212 103 ntBASIC5.27□□□□□ -1.57
TRAF7Q6Q0C0 Y_RNA.549-201ENST00000384657 102 ntBASIC5.27□□□□□ -1.57
TRAF7Q6Q0C0 MIR590-201ENST00000385008 97 ntBASIC5.27□□□□□ -1.57
TRAF7Q6Q0C0 UBA52P6-201ENST00000399822 382 ntBASIC5.27□□□□□ -1.57
TRAF7Q6Q0C0 AL117337.1-201ENST00000412789 444 ntTSL 3 BASIC5.27□□□□□ -1.57
TRAF7Q6Q0C0 ZNF230-201ENST00000429154 4115 ntAPPRIS P1 TSL 1 (best) BASIC5.27□□□□□ -1.57
TRAF7Q6Q0C0 RNU6-377P-201ENST00000515965 102 ntBASIC5.27□□□□□ -1.57
TRAF7Q6Q0C0 RNA5SP291-201ENST00000517222 105 ntBASIC5.27□□□□□ -1.57
TRAF7Q6Q0C0 AL121932.1-201ENST00000605542 214 ntBASIC5.27□□□□□ -1.57
TRAF7Q6Q0C0 AL391903.3-201ENST00000612158 163 ntBASIC5.27□□□□□ -1.57
TRAF7Q6Q0C0 AC005296.1-201ENST00000616145 209 ntBASIC5.27□□□□□ -1.57
TRAF7Q6Q0C0 UBXN7-201ENST00000296328 10568 ntAPPRIS P1 TSL 1 (best) BASIC5.27□□□□□ -1.57
Retrieved 100 of 98,524 protein–RNA pairs in 129.3 ms