Protein–RNA interactions for Protein: P55290

CDH13, Cadherin-13, humanhuman

Predictions only

Length 713 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDH13P55290 MORN2-203ENST00000409131 544 ntTSL 5 BASIC2.65□□□□□ -1.99
CDH13P55290 LINC01707-201ENST00000425517 627 ntTSL 3 BASIC2.65□□□□□ -1.99
CDH13P55290 AL691515.1-201ENST00000432976 733 ntTSL 2 BASIC2.65□□□□□ -1.99
CDH13P55290 AC004383.1-201ENST00000438135 289 ntBASIC2.65□□□□□ -1.99
CDH13P55290 AC020743.3-201ENST00000440351 360 ntTSL 3 BASIC2.65□□□□□ -1.99
CDH13P55290 AL136972.1-201ENST00000443471 351 ntTSL 3 BASIC2.65□□□□□ -1.99
CDH13P55290 PRPS1P1-201ENST00000445305 876 ntBASIC2.65□□□□□ -1.99
CDH13P55290 AC016556.1-201ENST00000510004 935 ntTSL 2 BASIC2.65□□□□□ -1.99
CDH13P55290 RNU6-835P-201ENST00000516974 104 ntBASIC2.65□□□□□ -1.99
CDH13P55290 AC011257.1-201ENST00000519048 281 ntTSL 3 BASIC2.65□□□□□ -1.99
CDH13P55290 MTND4P7-201ENST00000523876 130 ntBASIC2.65□□□□□ -1.99
CDH13P55290 COX6CP5-201ENST00000527162 228 ntBASIC2.65□□□□□ -1.99
CDH13P55290 HSPE1P20-201ENST00000538133 289 ntBASIC2.65□□□□□ -1.99
CDH13P55290 AC022080.3-201ENST00000544433 482 ntBASIC2.65□□□□□ -1.99
CDH13P55290 MDM2-233ENST00000545204 398 ntTSL 5 BASIC2.65□□□□□ -1.99
CDH13P55290 AC004486.1-201ENST00000546846 233 ntBASIC2.65□□□□□ -1.99
CDH13P55290 CR383656.8-201ENST00000549046 145 ntBASIC2.65□□□□□ -1.99
CDH13P55290 AC018904.1-201ENST00000560594 542 ntTSL 3 BASIC2.65□□□□□ -1.99
CDH13P55290 AC009558.1-201ENST00000561174 581 ntTSL 4 BASIC2.65□□□□□ -1.99
CDH13P55290 LINC01290-201ENST00000566787 502 ntTSL 2 BASIC2.65□□□□□ -1.99
CDH13P55290 AC025678.1-201ENST00000567861 338 ntBASIC2.65□□□□□ -1.99
CDH13P55290 AC009163.5-201ENST00000575421 637 ntBASIC2.65□□□□□ -1.99
CDH13P55290 AC103810.1-201ENST00000579873 453 ntBASIC2.65□□□□□ -1.99
CDH13P55290 MIR3670-2-201ENST00000582974 65 ntBASIC2.65□□□□□ -1.99
CDH13P55290 MIR3670-1-201ENST00000584160 65 ntBASIC2.65□□□□□ -1.99
CDH13P55290 MIR3670-3-201ENST00000584855 65 ntBASIC2.65□□□□□ -1.99
CDH13P55290 OR1M4P-201ENST00000589199 287 ntBASIC2.65□□□□□ -1.99
CDH13P55290 AC093788.1-201ENST00000609356 927 ntBASIC2.65□□□□□ -1.99
CDH13P55290 AL359962.2-201ENST00000610044 303 ntTSL 5 BASIC2.65□□□□□ -1.99
CDH13P55290 MIR3670-4-201ENST00000612260 65 ntBASIC2.65□□□□□ -1.99
CDH13P55290 uc_338.34-201ENST00000617467 174 ntBASIC2.65□□□□□ -1.99
CDH13P55290 HOTAIRM1_5.1-201ENST00000619311 145 ntBASIC2.65□□□□□ -1.99
CDH13P55290 AL596220.1-201ENST00000622121 542 ntTSL 4 BASIC2.65□□□□□ -1.99
CDH13P55290 AL161782.1-201ENST00000622930 586 ntTSL 3 BASIC2.65□□□□□ -1.99
CDH13P55290 HMHB1-202ENST00000638299 126 ntAPPRIS P2 TSL 1 (best) BASIC2.65□□□□□ -1.99
CDH13P55290 HAUS6P2-201ENST00000433254 2404 ntBASIC2.65□□□□□ -1.99
CDH13P55290 ZNF680-202ENST00000447137 2159 ntTSL 2 BASIC2.65□□□□□ -1.99
CDH13P55290 PSG1-205ENST00000595124 1692 ntTSL 2 BASIC2.65□□□□□ -1.99
CDH13P55290 KLRA1P-202ENST00000510134 1410 ntTSL 5 BASIC2.65□□□□□ -1.99
CDH13P55290 FOXP2-210ENST00000403559 6415 ntTSL 2 BASIC2.65□□□□□ -1.99
CDH13P55290 ZMYM1-210ENST00000611874 4466 ntAPPRIS P1 TSL 2 BASIC2.65□□□□□ -1.99
CDH13P55290 AL109809.4-201ENST00000603520 2185 ntBASIC2.64□□□□□ -1.99
CDH13P55290 LRIF1-203ENST00000494675 1912 ntAPPRIS ALT2 TSL 2 BASIC2.64□□□□□ -1.99
CDH13P55290 RNU6-461P-201ENST00000364195 107 ntBASIC2.64□□□□□ -1.99
CDH13P55290 MIR491-201ENST00000384877 84 ntBASIC2.64□□□□□ -1.99
CDH13P55290 CD3D-202ENST00000392884 476 ntTSL 2 BASIC2.64□□□□□ -1.99
CDH13P55290 UBA52P6-201ENST00000399822 382 ntBASIC2.64□□□□□ -1.99
CDH13P55290 AL606923.1-201ENST00000406616 190 ntBASIC2.64□□□□□ -1.99
CDH13P55290 RPL19P1-201ENST00000411635 428 ntBASIC2.64□□□□□ -1.99
CDH13P55290 HMGN2P35-201ENST00000412164 270 ntBASIC2.64□□□□□ -1.99
CDH13P55290 AL445123.1-201ENST00000422023 446 ntTSL 2 BASIC2.64□□□□□ -1.99
CDH13P55290 CALM1P1-201ENST00000442082 433 ntBASIC2.64□□□□□ -1.99
CDH13P55290 IGKV1OR-3-201ENST00000446944 348 ntBASIC2.64□□□□□ -1.99
CDH13P55290 snoU109.2-201ENST00000459316 135 ntBASIC2.64□□□□□ -1.99
CDH13P55290 AC090525.1-201ENST00000479116 478 ntBASIC2.64□□□□□ -1.99
CDH13P55290 AC074124.1-201ENST00000502368 375 ntTSL 3 BASIC2.64□□□□□ -1.99
CDH13P55290 AC108067.1-201ENST00000514304 215 ntTSL 5 BASIC2.64□□□□□ -1.99
CDH13P55290 Y_RNA.687-201ENST00000516558 91 ntBASIC2.64□□□□□ -1.99
CDH13P55290 LINC02546-202ENST00000528119 801 ntTSL 5 BASIC2.64□□□□□ -1.99
CDH13P55290 AC009269.4-201ENST00000557828 440 ntTSL 3 BASIC2.64□□□□□ -1.99
CDH13P55290 NRBF2P5-201ENST00000603087 788 ntBASIC2.64□□□□□ -1.99
CDH13P55290 AC011890.2-201ENST00000613393 294 ntBASIC2.64□□□□□ -1.99
CDH13P55290 AC026585.1-201ENST00000619582 524 ntBASIC2.64□□□□□ -1.99
CDH13P55290 CNOT1-223ENST00000628857 291 ntTSL 5 BASIC2.64□□□□□ -1.99
CDH13P55290 MIR7157-201ENST00000635801 60 ntBASIC2.64□□□□□ -1.99
CDH13P55290 MIR3529-201ENST00000637713 78 ntBASIC2.64□□□□□ -1.99
CDH13P55290 AL359854.1-201ENST00000614203 1594 ntBASIC2.64□□□□□ -1.99
CDH13P55290 CDK1-209ENST00000614696 1884 ntTSL 5 BASIC2.64□□□□□ -1.99
CDH13P55290 TBC1D31-214ENST00000522420 3167 ntTSL 1 (best) BASIC2.63□□□□□ -1.99
CDH13P55290 COPS2-203ENST00000542928 1580 ntTSL 2 BASIC2.63□□□□□ -1.99
CDH13P55290 AC138393.1-203ENST00000327086 343 ntBASIC2.63□□□□□ -1.99
CDH13P55290 Y_RNA.324-201ENST00000365165 102 ntBASIC2.63□□□□□ -1.99
CDH13P55290 RNU6-487P-201ENST00000365430 104 ntBASIC2.63□□□□□ -1.99
CDH13P55290 SET-203ENST00000372688 801 ntTSL 2 BASIC2.63□□□□□ -1.99
CDH13P55290 RPL17P50-201ENST00000396131 546 ntBASIC2.63□□□□□ -1.99
CDH13P55290 FO393413.1-201ENST00000402892 195 ntBASIC2.63□□□□□ -1.99
CDH13P55290 RNU6-648P-201ENST00000410190 107 ntBASIC2.63□□□□□ -1.99
CDH13P55290 AC073626.1-201ENST00000415146 582 ntTSL 4 BASIC2.63□□□□□ -1.99
CDH13P55290 AC003092.1-201ENST00000415536 639 ntTSL 3 BASIC2.63□□□□□ -1.99
CDH13P55290 PGBD4P6-201ENST00000421501 610 ntBASIC2.63□□□□□ -1.99
CDH13P55290 TRAPPC2P3-201ENST00000443200 321 ntBASIC2.63□□□□□ -1.99
CDH13P55290 UBBP3-201ENST00000445497 241 ntBASIC2.63□□□□□ -1.99
CDH13P55290 AL138900.1-201ENST00000449345 399 ntTSL 3 BASIC2.63□□□□□ -1.99
CDH13P55290 AC004888.1-201ENST00000450480 547 ntTSL 2 BASIC2.63□□□□□ -1.99
CDH13P55290 TSPY5P-202ENST00000456541 142 ntTSL 3 BASIC2.63□□□□□ -1.99
CDH13P55290 AL136164.1-201ENST00000456795 352 ntTSL 3 BASIC2.63□□□□□ -1.99
CDH13P55290 RNU7-167P-201ENST00000459160 62 ntBASIC2.63□□□□□ -1.99
CDH13P55290 AC034226.1-201ENST00000506429 487 ntTSL 2 BASIC2.63□□□□□ -1.99
CDH13P55290 AC091885.1-201ENST00000506658 268 ntBASIC2.63□□□□□ -1.99
CDH13P55290 AC008539.1-201ENST00000507653 482 ntTSL 3 BASIC2.63□□□□□ -1.99
CDH13P55290 AC114316.1-201ENST00000511323 278 ntTSL 5 BASIC2.63□□□□□ -1.99
CDH13P55290 AC114781.4-201ENST00000513707 639 ntBASIC2.63□□□□□ -1.99
CDH13P55290 RNU6-314P-201ENST00000516574 104 ntBASIC2.63□□□□□ -1.99
CDH13P55290 SNORA31.18-201ENST00000517043 134 ntBASIC2.63□□□□□ -1.99
CDH13P55290 AC103957.1-201ENST00000517681 503 ntTSL 3 BASIC2.63□□□□□ -1.99
CDH13P55290 BNIP3P6-201ENST00000549284 499 ntBASIC2.63□□□□□ -1.99
CDH13P55290 AL157687.1-201ENST00000554853 619 ntBASIC2.63□□□□□ -1.99
CDH13P55290 AC135178.3-204ENST00000585181 451 ntTSL 2 BASIC2.63□□□□□ -1.99
CDH13P55290 AC025165.5-201ENST00000602802 578 ntBASIC2.63□□□□□ -1.99
CDH13P55290 AL161756.2-201ENST00000604597 246 ntBASIC2.63□□□□□ -1.99
Retrieved 100 of 98,524 protein–RNA pairs in 121.1 ms