Protein–RNA interactions for Protein: P55289

CDH12, Cadherin-12, humanhuman

Predictions only

Length 794 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDH12P55289 AC104576.1-201ENST00000524225 88 ntBASIC2.94□□□□□ -1.94
CDH12P55289 HTN3-202ENST00000526767 578 ntAPPRIS P2 TSL 1 (best) BASIC2.94□□□□□ -1.94
CDH12P55289 AC026371.1-201ENST00000551867 419 ntBASIC2.94□□□□□ -1.94
CDH12P55289 AC008083.3-202ENST00000552063 277 ntTSL 3 BASIC2.94□□□□□ -1.94
CDH12P55289 AL391261.3-201ENST00000557194 520 ntBASIC2.94□□□□□ -1.94
CDH12P55289 FRG2DP-202ENST00000566967 323 ntBASIC2.94□□□□□ -1.94
CDH12P55289 AC034105.4-201ENST00000568304 277 ntBASIC2.94□□□□□ -1.94
CDH12P55289 MIR4782-201ENST00000577987 79 ntBASIC2.94□□□□□ -1.94
CDH12P55289 OR1M4P-201ENST00000589199 287 ntBASIC2.94□□□□□ -1.94
CDH12P55289 AL020997.2-201ENST00000602607 184 ntBASIC2.94□□□□□ -1.94
CDH12P55289 AL355598.1-201ENST00000604169 202 ntBASIC2.94□□□□□ -1.94
CDH12P55289 MTND4LP5-201ENST00000605152 292 ntBASIC2.94□□□□□ -1.94
CDH12P55289 RNU6-6P-201ENST00000606623 107 ntBASIC2.94□□□□□ -1.94
CDH12P55289 AC064836.2-201ENST00000609491 462 ntBASIC2.94□□□□□ -1.94
CDH12P55289 AL442067.2-201ENST00000614033 363 ntBASIC2.94□□□□□ -1.94
CDH12P55289 AC068831.7-201ENST00000616954 363 ntBASIC2.94□□□□□ -1.94
CDH12P55289 Z69720.2-201ENST00000624755 279 ntBASIC2.94□□□□□ -1.94
CDH12P55289 LINC02246-205ENST00000627623 417 ntTSL 5 BASIC2.94□□□□□ -1.94
CDH12P55289 MBNL3-205ENST00000370857 8760 ntTSL 5 BASIC2.94□□□□□ -1.94
CDH12P55289 ZNF676-201ENST00000397121 2944 ntAPPRIS P1 TSL 2 BASIC2.94□□□□□ -1.94
CDH12P55289 ATP2B1-201ENST00000261173 6777 ntAPPRIS P1 TSL 1 (best) BASIC2.94□□□□□ -1.94
CDH12P55289 RNF6-201ENST00000346166 3282 ntAPPRIS P1 TSL 1 (best) BASIC2.93□□□□□ -1.94
CDH12P55289 CDK1-209ENST00000614696 1884 ntTSL 5 BASIC2.93□□□□□ -1.94
CDH12P55289 DEFB134-201ENST00000382205 314 ntAPPRIS P1 TSL 1 (best) BASIC2.93□□□□□ -1.94
CDH12P55289 Y_RNA.419-201ENST00000384041 102 ntBASIC2.93□□□□□ -1.94
CDH12P55289 RNU6-214P-201ENST00000384130 107 ntBASIC2.93□□□□□ -1.94
CDH12P55289 EIF4EBP2P3-201ENST00000403144 334 ntBASIC2.93□□□□□ -1.94
CDH12P55289 NT5C3A-205ENST00000409467 1032 ntAPPRIS ALT1 TSL 5 BASIC2.93□□□□□ -1.94
CDH12P55289 RNA5SP38-201ENST00000410750 119 ntBASIC2.93□□□□□ -1.94
CDH12P55289 RPL37P10-201ENST00000412884 288 ntBASIC2.93□□□□□ -1.94
CDH12P55289 AC003092.1-201ENST00000415536 639 ntTSL 3 BASIC2.93□□□□□ -1.94
CDH12P55289 AL359195.1-201ENST00000416657 339 ntTSL 3 BASIC2.93□□□□□ -1.94
CDH12P55289 AC016831.2-201ENST00000417179 352 ntBASIC2.93□□□□□ -1.94
CDH12P55289 LINC02526-201ENST00000424162 419 ntTSL 2 BASIC2.93□□□□□ -1.94
CDH12P55289 SNAP23P1-201ENST00000433229 246 ntBASIC2.93□□□□□ -1.94
CDH12P55289 AC098831.1-201ENST00000440661 216 ntBASIC2.93□□□□□ -1.94
CDH12P55289 AC010099.1-201ENST00000455434 375 ntBASIC2.93□□□□□ -1.94
CDH12P55289 Y_RNA.635-201ENST00000459041 101 ntBASIC2.93□□□□□ -1.94
CDH12P55289 snoU13.28-201ENST00000459235 104 ntBASIC2.93□□□□□ -1.94
CDH12P55289 RPL32P34-201ENST00000486380 400 ntBASIC2.93□□□□□ -1.94
CDH12P55289 RN7SL283P-201ENST00000489055 303 ntBASIC2.93□□□□□ -1.94
CDH12P55289 AC026801.1-201ENST00000497178 464 ntBASIC2.93□□□□□ -1.94
CDH12P55289 AL359273.1-202ENST00000505585 905 ntTSL 1 (best) BASIC2.93□□□□□ -1.94
CDH12P55289 MDM2-221ENST00000517852 393 ntTSL 1 (best) BASIC2.93□□□□□ -1.94
CDH12P55289 AC026462.3-202ENST00000564361 515 ntTSL 3 BASIC2.93□□□□□ -1.94
CDH12P55289 AL356055.1-201ENST00000602528 446 ntBASIC2.93□□□□□ -1.94
CDH12P55289 AC073657.2-201ENST00000605661 303 ntBASIC2.93□□□□□ -1.94
CDH12P55289 uc_338.25-201ENST00000613756 156 ntBASIC2.93□□□□□ -1.94
CDH12P55289 AC073308.1-201ENST00000623696 305 ntBASIC2.93□□□□□ -1.94
CDH12P55289 AC215522.3-201ENST00000635602 354 ntTSL 5 BASIC2.93□□□□□ -1.94
CDH12P55289 CC2D2B-210ENST00000636965 3247 ntTSL 5 BASIC2.93□□□□□ -1.94
CDH12P55289 CCDC82-201ENST00000278520 2941 ntAPPRIS P2 TSL 5 BASIC2.93□□□□□ -1.94
CDH12P55289 RNF17-204ENST00000339524 2203 ntTSL 2 BASIC2.93□□□□□ -1.94
CDH12P55289 KNTC1-205ENST00000450485 3655 ntTSL 2 BASIC2.93□□□□□ -1.94
CDH12P55289 AC128685.1-201ENST00000490357 1834 ntTSL 5 BASIC2.93□□□□□ -1.94
CDH12P55289 MUC15-205ENST00000529533 2084 ntTSL 1 (best) BASIC2.92□□□□□ -1.94
CDH12P55289 AGTR1-206ENST00000474935 1795 ntAPPRIS P1 TSL 3 BASIC2.92□□□□□ -1.94
CDH12P55289 RNU4-76P-201ENST00000364509 141 ntBASIC2.92□□□□□ -1.94
CDH12P55289 SNORA62.3-201ENST00000365110 153 ntBASIC2.92□□□□□ -1.94
CDH12P55289 Y_RNA.384-201ENST00000383909 102 ntBASIC2.92□□□□□ -1.94
CDH12P55289 MIR200C-201ENST00000384980 68 ntBASIC2.92□□□□□ -1.94
CDH12P55289 MIR518D-201ENST00000385014 87 ntBASIC2.92□□□□□ -1.94
CDH12P55289 RPL5P18-201ENST00000406671 891 ntBASIC2.92□□□□□ -1.94
CDH12P55289 RNU6-1304P-201ENST00000411374 106 ntBASIC2.92□□□□□ -1.94
CDH12P55289 SNORD56-201ENST00000413522 71 ntBASIC2.92□□□□□ -1.94
CDH12P55289 AL096701.2-201ENST00000416920 238 ntBASIC2.92□□□□□ -1.94
CDH12P55289 C1orf195-201ENST00000424792 255 ntTSL 2 BASIC2.92□□□□□ -1.94
CDH12P55289 MTND1P14-201ENST00000427400 950 ntBASIC2.92□□□□□ -1.94
CDH12P55289 RPS12P18-201ENST00000442381 270 ntBASIC2.92□□□□□ -1.94
CDH12P55289 RPL21P10-201ENST00000463521 490 ntBASIC2.92□□□□□ -1.94
CDH12P55289 AC096745.1-201ENST00000509945 370 ntBASIC2.92□□□□□ -1.94
CDH12P55289 LINC02122-201ENST00000511395 577 ntTSL 4 BASIC2.92□□□□□ -1.94
CDH12P55289 RPL39P5-202ENST00000512505 151 ntBASIC2.92□□□□□ -1.94
CDH12P55289 RNU6-559P-201ENST00000516151 98 ntBASIC2.92□□□□□ -1.94
CDH12P55289 Y_RNA.687-201ENST00000516558 91 ntBASIC2.92□□□□□ -1.94
CDH12P55289 EBAG9-207ENST00000531677 777 ntTSL 1 (best) BASIC2.92□□□□□ -1.94
CDH12P55289 AP003174.2-201ENST00000544663 294 ntTSL 3 BASIC2.92□□□□□ -1.94
CDH12P55289 AP000462.3-201ENST00000545593 330 ntTSL 5 BASIC2.92□□□□□ -1.94
CDH12P55289 IMMP1LP2-201ENST00000552954 492 ntBASIC2.92□□□□□ -1.94
CDH12P55289 AL163153.1-201ENST00000554223 283 ntBASIC2.92□□□□□ -1.94
CDH12P55289 MIR2682-201ENST00000580305 110 ntBASIC2.92□□□□□ -1.94
CDH12P55289 AC024220.1-201ENST00000603675 484 ntBASIC2.92□□□□□ -1.94
CDH12P55289 MTND4LP32-201ENST00000636111 270 ntBASIC2.92□□□□□ -1.94
CDH12P55289 RMDN2-205ENST00000407257 2280 ntTSL 5 BASIC2.92□□□□□ -1.94
CDH12P55289 GMFB-208ENST00000554908 6721 ntTSL 1 (best) BASIC2.92□□□□□ -1.94
CDH12P55289 OR9G4-204ENST00000641668 2608 ntAPPRIS P1 BASIC2.92□□□□□ -1.94
CDH12P55289 TAS2R13-201ENST00000390677 1637 ntAPPRIS P1 BASIC2.92□□□□□ -1.94
CDH12P55289 AC069228.1-201ENST00000546936 1615 ntTSL 3 BASIC2.92□□□□□ -1.94
CDH12P55289 IL6ST-205ENST00000381294 2574 ntTSL 1 (best) BASIC2.92□□□□□ -1.94
CDH12P55289 AL049781.1-201ENST00000623195 3585 ntBASIC2.91□□□□□ -1.94
CDH12P55289 NEB-220ENST00000618972 26307 ntAPPRIS ALT2 TSL 5 BASIC2.91□□□□□ -1.94
CDH12P55289 PHF6-205ENST00000625464 4434 ntAPPRIS ALT1 TSL 5 BASIC2.91□□□□□ -1.94
CDH12P55289 GSTA3-201ENST00000211122 902 ntAPPRIS P1 TSL 1 (best) BASIC2.91□□□□□ -1.94
CDH12P55289 RNU1-33P-201ENST00000364249 162 ntBASIC2.91□□□□□ -1.94
CDH12P55289 RNU6-898P-201ENST00000365627 104 ntBASIC2.91□□□□□ -1.94
CDH12P55289 SPRR2E-201ENST00000368750 678 ntAPPRIS P1 TSL 1 (best) BASIC2.91□□□□□ -1.94
CDH12P55289 RNU6-72P-201ENST00000384285 79 ntBASIC2.91□□□□□ -1.94
CDH12P55289 SNORD116-29-201ENST00000384516 83 ntBASIC2.91□□□□□ -1.94
CDH12P55289 MIR34A-201ENST00000385130 110 ntBASIC2.91□□□□□ -1.94
CDH12P55289 DEFB116-201ENST00000400549 309 ntAPPRIS P1 TSL 1 (best) BASIC2.91□□□□□ -1.94
Retrieved 100 of 98,524 protein–RNA pairs in 149.6 ms