Protein–RNA interactions for Protein: P35052

GPC1, Glypican-1, humanhuman

Predictions only

Length 558 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
GPC1P35052 AC008953.1-201ENST00000497334 318 ntBASIC4.6□□□□□ -1.67
GPC1P35052 AC140172.1-201ENST00000502928 141 ntBASIC4.6□□□□□ -1.67
GPC1P35052 MAPK1-204ENST00000544786 951 ntTSL 1 (best) BASIC4.6□□□□□ -1.67
GPC1P35052 LINC01580-201ENST00000555255 561 ntTSL 4 BASIC4.6□□□□□ -1.67
GPC1P35052 AC024592.1-202ENST00000590441 341 ntTSL 3 BASIC4.6□□□□□ -1.67
GPC1P35052 LINC00901.1-201ENST00000617252 152 ntBASIC4.6□□□□□ -1.67
GPC1P35052 NECAB1-202ENST00000521366 2908 ntTSL 1 (best) BASIC4.6□□□□□ -1.67
GPC1P35052 LUZP4-201ENST00000371920 1701 ntAPPRIS P2 TSL 1 (best) BASIC4.6□□□□□ -1.67
GPC1P35052 AC139713.2-214ENST00000642059 1811 ntBASIC4.6□□□□□ -1.67
GPC1P35052 WDR49-207ENST00000479765 2108 ntTSL 2 BASIC4.6□□□□□ -1.67
GPC1P35052 INPP4B-220ENST00000513000 8831 ntAPPRIS P1 TSL 1 (best) BASIC4.6□□□□□ -1.67
GPC1P35052 CASC1-203ENST00000395987 2363 ntAPPRIS P3 TSL 1 (best) BASIC4.6□□□□□ -1.67
GPC1P35052 MRE11-202ENST00000323977 2588 ntTSL 1 (best) BASIC4.59□□□□□ -1.67
GPC1P35052 SALL4P2-201ENST00000423288 2910 ntBASIC4.59□□□□□ -1.67
GPC1P35052 MAPK10-263ENST00000641052 4307 ntBASIC4.59□□□□□ -1.67
GPC1P35052 TLR3-201ENST00000296795 6015 ntAPPRIS P1 TSL 1 (best) BASIC4.59□□□□□ -1.67
GPC1P35052 SMAD5-212ENST00000545620 6937 ntAPPRIS P1 TSL 5 BASIC4.59□□□□□ -1.67
GPC1P35052 GYPA-202ENST00000360771 2659 ntAPPRIS P3 TSL 1 (best) BASIC4.59□□□□□ -1.67
GPC1P35052 RNU6-834P-201ENST00000362367 110 ntBASIC4.59□□□□□ -1.67
GPC1P35052 RNU6-1298P-201ENST00000362456 101 ntBASIC4.59□□□□□ -1.67
GPC1P35052 U8.4-201ENST00000363626 134 ntBASIC4.59□□□□□ -1.67
GPC1P35052 RNU6-1141P-201ENST00000364520 107 ntBASIC4.59□□□□□ -1.67
GPC1P35052 Y_RNA.293-201ENST00000364908 93 ntBASIC4.59□□□□□ -1.67
GPC1P35052 RNU6-793P-201ENST00000384233 104 ntBASIC4.59□□□□□ -1.67
GPC1P35052 RNU1-106P-201ENST00000384382 164 ntBASIC4.59□□□□□ -1.67
GPC1P35052 RNU6-376P-201ENST00000384731 106 ntBASIC4.59□□□□□ -1.67
GPC1P35052 TOMM22P1-201ENST00000418578 312 ntBASIC4.59□□□□□ -1.67
GPC1P35052 RPL21P66-201ENST00000426566 466 ntBASIC4.59□□□□□ -1.67
GPC1P35052 AL691497.1-201ENST00000443270 449 ntTSL 2 BASIC4.59□□□□□ -1.67
GPC1P35052 CLCA3P-202ENST00000466454 3412 ntTSL 1 (best) BASIC4.59□□□□□ -1.67
GPC1P35052 RN7SKP276-201ENST00000516242 268 ntBASIC4.59□□□□□ -1.67
GPC1P35052 EMSY-215ENST00000533248 3798 ntTSL 1 (best) BASIC4.59□□□□□ -1.67
GPC1P35052 AC010197.1-201ENST00000541860 578 ntTSL 4 BASIC4.59□□□□□ -1.67
GPC1P35052 AC104002.1-201ENST00000557025 380 ntTSL 3 BASIC4.59□□□□□ -1.67
GPC1P35052 AC021231.3-201ENST00000558497 370 ntBASIC4.59□□□□□ -1.67
GPC1P35052 AC012435.2-201ENST00000562869 361 ntTSL 3 BASIC4.59□□□□□ -1.67
GPC1P35052 AC006380.1-201ENST00000603598 186 ntBASIC4.59□□□□□ -1.67
GPC1P35052 DLD-214ENST00000639772 421 ntTSL 5 BASIC4.59□□□□□ -1.67
GPC1P35052 SCN1A-220ENST00000641603 12506 ntBASIC4.59□□□□□ -1.67
GPC1P35052 IFI44L-201ENST00000370751 5874 ntAPPRIS P1 TSL 1 (best) BASIC4.59□□□□□ -1.67
GPC1P35052 CP-201ENST00000264613 4676 ntAPPRIS P1 TSL 1 (best) BASIC4.59□□□□□ -1.68
GPC1P35052 SPINK5-201ENST00000256084 3535 ntAPPRIS P3 TSL 1 (best) BASIC4.59□□□□□ -1.68
GPC1P35052 TMEM106B-201ENST00000396667 12539 ntAPPRIS P1 TSL 1 (best) BASIC4.59□□□□□ -1.68
GPC1P35052 PCDH15-212ENST00000395442 2970 ntTSL 5 BASIC4.59□□□□□ -1.68
GPC1P35052 ANGPTL1-202ENST00000367629 2289 ntAPPRIS P1 TSL 1 (best) BASIC4.58□□□□□ -1.68
GPC1P35052 APC-207ENST00000508376 10619 ntAPPRIS P1 TSL 1 (best) BASIC4.58□□□□□ -1.68
GPC1P35052 AL136164.3-201ENST00000624429 3978 ntBASIC4.58□□□□□ -1.68
GPC1P35052 PTPN13-201ENST00000316707 7546 ntAPPRIS ALT2 TSL 1 (best) BASIC4.58□□□□□ -1.68
GPC1P35052 OR10D3-203ENST00000641546 3566 ntAPPRIS P1 BASIC4.58□□□□□ -1.68
GPC1P35052 AC022893.2-201ENST00000564832 3296 ntBASIC4.58□□□□□ -1.68
GPC1P35052 AP001273.1-201ENST00000624493 3152 ntBASIC4.58□□□□□ -1.68
GPC1P35052 SGIP1-204ENST00000371039 4080 ntAPPRIS ALT2 TSL 1 (best) BASIC4.58□□□□□ -1.68
GPC1P35052 GAGE12B-201ENST00000361446 117 ntAPPRIS P1 BASIC4.58□□□□□ -1.68
GPC1P35052 RNU6-103P-201ENST00000363686 107 ntBASIC4.58□□□□□ -1.68
GPC1P35052 snoU2_19.4-201ENST00000364329 80 ntBASIC4.58□□□□□ -1.68
GPC1P35052 RNU6-335P-201ENST00000364563 113 ntBASIC4.58□□□□□ -1.68
GPC1P35052 Y_RNA.337-201ENST00000365312 102 ntBASIC4.58□□□□□ -1.68
GPC1P35052 SNORA70-201ENST00000384436 135 ntBASIC4.58□□□□□ -1.68
GPC1P35052 U3.22-201ENST00000391120 215 ntBASIC4.58□□□□□ -1.68
GPC1P35052 AL357515.1-201ENST00000402967 542 ntBASIC4.58□□□□□ -1.68
GPC1P35052 AC006461.1-201ENST00000412637 326 ntBASIC4.58□□□□□ -1.68
GPC1P35052 AL357500.1-201ENST00000413004 279 ntTSL 3 BASIC4.58□□□□□ -1.68
GPC1P35052 RPS12P23-201ENST00000419579 400 ntBASIC4.58□□□□□ -1.68
GPC1P35052 AC244670.1-201ENST00000436879 112 ntBASIC4.58□□□□□ -1.68
GPC1P35052 AL161618.1-201ENST00000438738 761 ntTSL 5 BASIC4.58□□□□□ -1.68
GPC1P35052 LINC00280-201ENST00000439525 448 ntTSL 2 BASIC4.58□□□□□ -1.68
GPC1P35052 AL445524.1-202ENST00000440665 416 ntTSL 3 BASIC4.58□□□□□ -1.68
GPC1P35052 AC009487.1-201ENST00000444164 403 ntTSL 3 BASIC4.58□□□□□ -1.68
GPC1P35052 AC000111.2-201ENST00000448200 210 ntBASIC4.58□□□□□ -1.68
GPC1P35052 LINC01766-201ENST00000453968 362 ntTSL 3 BASIC4.58□□□□□ -1.68
GPC1P35052 snoU13.4-201ENST00000458916 104 ntBASIC4.58□□□□□ -1.68
GPC1P35052 snoU13.20-201ENST00000459180 104 ntBASIC4.58□□□□□ -1.68
GPC1P35052 RPS23P7-201ENST00000466210 444 ntBASIC4.58□□□□□ -1.68
GPC1P35052 AC091179.3-201ENST00000474761 144 ntBASIC4.58□□□□□ -1.68
GPC1P35052 LINC02230-201ENST00000511174 301 ntTSL 5 BASIC4.58□□□□□ -1.68
GPC1P35052 RNU6-709P-201ENST00000517257 104 ntBASIC4.58□□□□□ -1.68
GPC1P35052 AC005255.1-201ENST00000593748 216 ntBASIC4.58□□□□□ -1.68
GPC1P35052 AC211433.2-201ENST00000608433 387 ntBASIC4.58□□□□□ -1.68
GPC1P35052 MIR3674-201ENST00000636576 68 ntBASIC4.58□□□□□ -1.68
GPC1P35052 AC018529.3-201ENST00000624212 2254 ntBASIC4.58□□□□□ -1.68
GPC1P35052 UBA6-AS1-203ENST00000500538 3352 ntTSL 1 (best) BASIC4.58□□□□□ -1.68
GPC1P35052 CACNB4-273ENST00000638091 4061 ntTSL 5 BASIC4.58□□□□□ -1.68
GPC1P35052 RXFP1-204ENST00000423548 3930 ntTSL 2 BASIC4.58□□□□□ -1.68
GPC1P35052 CSPP1-203ENST00000519668 3715 ntAPPRIS ALT2 TSL 1 (best) BASIC4.58□□□□□ -1.68
GPC1P35052 ADGRL2-201ENST00000319517 5479 ntAPPRIS P2 TSL 1 (best) BASIC4.58□□□□□ -1.68
GPC1P35052 FAM184A-204ENST00000368475 3392 ntTSL 2 BASIC4.57□□□□□ -1.68
GPC1P35052 VPS13C-201ENST00000249837 13300 ntAPPRIS P3 TSL 1 (best) BASIC4.57□□□□□ -1.68
GPC1P35052 AC006994.2-202ENST00000639259 3828 ntTSL 5 BASIC4.57□□□□□ -1.68
GPC1P35052 C6-202ENST00000337836 3551 ntAPPRIS P1 TSL 1 (best) BASIC4.57□□□□□ -1.68
GPC1P35052 CASK-207ENST00000421587 8204 ntAPPRIS ALT2 TSL 1 (best) BASIC4.57□□□□□ -1.68
GPC1P35052 Y_RNA.172-201ENST00000363765 102 ntBASIC4.57□□□□□ -1.68
GPC1P35052 SNORA58B-201ENST00000364259 136 ntBASIC4.57□□□□□ -1.68
GPC1P35052 MIR105-2-201ENST00000385083 81 ntBASIC4.57□□□□□ -1.68
GPC1P35052 SPTLC1P2-201ENST00000407089 121 ntBASIC4.57□□□□□ -1.68
GPC1P35052 RN7SKP213-201ENST00000410746 298 ntBASIC4.57□□□□□ -1.68
GPC1P35052 AC012306.1-201ENST00000423267 114 ntBASIC4.57□□□□□ -1.68
GPC1P35052 EIF4HP2-201ENST00000424380 563 ntBASIC4.57□□□□□ -1.68
GPC1P35052 PTGES3P4-201ENST00000426243 356 ntBASIC4.57□□□□□ -1.68
GPC1P35052 AC125238.1-201ENST00000448842 249 ntBASIC4.57□□□□□ -1.68
GPC1P35052 AC073850.1-201ENST00000449243 255 ntBASIC4.57□□□□□ -1.68
Retrieved 100 of 98,524 protein–RNA pairs in 108.8 ms