Protein–RNA interactions for Protein: P29279

CTGF, Connective tissue growth factor, humanhuman

Predictions only

Length 349 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CTGFP29279 AC092059.1-201ENST00000485347 429 ntTSL 3 BASIC3.56□□□□□ -1.84
CTGFP29279 AC008243.1-201ENST00000504955 389 ntTSL 3 BASIC3.56□□□□□ -1.84
CTGFP29279 RNU6-120P-201ENST00000516077 103 ntBASIC3.56□□□□□ -1.84
CTGFP29279 RNU6-927P-201ENST00000516199 100 ntBASIC3.56□□□□□ -1.84
CTGFP29279 SNRPGP16-201ENST00000533275 226 ntBASIC3.56□□□□□ -1.84
CTGFP29279 AC090115.3-201ENST00000553218 849 ntBASIC3.56□□□□□ -1.84
CTGFP29279 MTCO3P23-201ENST00000561363 289 ntBASIC3.56□□□□□ -1.84
CTGFP29279 LINC02165-201ENST00000563061 443 ntTSL 3 BASIC3.56□□□□□ -1.84
CTGFP29279 CYCSP39-201ENST00000565821 309 ntBASIC3.56□□□□□ -1.84
CTGFP29279 ELOCP29-201ENST00000588193 334 ntBASIC3.56□□□□□ -1.84
CTGFP29279 AC062037.2-201ENST00000610137 73 ntBASIC3.56□□□□□ -1.84
CTGFP29279 DLX6-AS1_2.1-201ENST00000613701 207 ntBASIC3.56□□□□□ -1.84
CTGFP29279 OR9H1P-201ENST00000446393 4888 ntAPPRIS P1 BASIC3.56□□□□□ -1.84
CTGFP29279 OR56A1-203ENST00000641900 8448 ntAPPRIS P1 BASIC3.56□□□□□ -1.84
CTGFP29279 CASC1-205ENST00000545133 2146 ntAPPRIS ALT2 TSL 2 BASIC3.56□□□□□ -1.84
CTGFP29279 PRKACB-217ENST00000610457 4206 ntTSL 2 BASIC3.56□□□□□ -1.84
CTGFP29279 PRKACB-218ENST00000610703 4240 ntTSL 2 BASIC3.56□□□□□ -1.84
CTGFP29279 RNF38-210ENST00000611646 5185 ntTSL 5 BASIC3.56□□□□□ -1.84
CTGFP29279 HSPA8P4-201ENST00000511877 1920 ntBASIC3.56□□□□□ -1.84
CTGFP29279 LRRC39-201ENST00000342895 1881 ntAPPRIS P1 TSL 5 BASIC3.56□□□□□ -1.84
CTGFP29279 ZNF404-202ENST00000587539 1851 ntAPPRIS P2 TSL 5 BASIC3.56□□□□□ -1.84
CTGFP29279 NCOA1-201ENST00000288599 6952 ntAPPRIS ALT2 TSL 1 (best) BASIC3.55□□□□□ -1.84
CTGFP29279 VSTM2A-OT1-201ENST00000456049 3031 ntTSL 1 (best) BASIC3.55□□□□□ -1.84
CTGFP29279 KERA-201ENST00000266719 2162 ntAPPRIS P1 TSL 1 (best) BASIC3.55□□□□□ -1.84
CTGFP29279 AC000403.1-201ENST00000613696 3585 ntBASIC3.55□□□□□ -1.84
CTGFP29279 RAP2C-AS1-202ENST00000441399 3473 ntTSL 2 BASIC3.55□□□□□ -1.84
CTGFP29279 UBE2D3-233ENST00000618836 3472 ntAPPRIS ALT1 TSL 5 BASIC3.55□□□□□ -1.84
CTGFP29279 AC104662.3-202ENST00000507794 4055 ntTSL 2 BASIC3.55□□□□□ -1.84
CTGFP29279 MIR448-201ENST00000362131 111 ntBASIC3.55□□□□□ -1.84
CTGFP29279 RNU6-1188P-201ENST00000363795 107 ntBASIC3.55□□□□□ -1.84
CTGFP29279 SNORA7.2-201ENST00000364446 145 ntBASIC3.55□□□□□ -1.84
CTGFP29279 SNORA18.3-201ENST00000384122 132 ntBASIC3.55□□□□□ -1.84
CTGFP29279 Y_RNA.496-201ENST00000384444 101 ntBASIC3.55□□□□□ -1.84
CTGFP29279 MIR514A1-201ENST00000385133 98 ntBASIC3.55□□□□□ -1.84
CTGFP29279 AL139039.1-201ENST00000401900 692 ntBASIC3.55□□□□□ -1.84
CTGFP29279 AL160275.3-201ENST00000423876 471 ntBASIC3.55□□□□□ -1.84
CTGFP29279 RPL23AP50-201ENST00000434149 455 ntBASIC3.55□□□□□ -1.84
CTGFP29279 AC008278.2-201ENST00000438178 409 ntTSL 3 BASIC3.55□□□□□ -1.84
CTGFP29279 AL162388.1-201ENST00000450912 352 ntBASIC3.55□□□□□ -1.84
CTGFP29279 RPL23AP31-201ENST00000456160 467 ntBASIC3.55□□□□□ -1.84
CTGFP29279 AL049874.1-201ENST00000489560 388 ntBASIC3.55□□□□□ -1.84
CTGFP29279 RNU2-69P-201ENST00000516061 100 ntBASIC3.55□□□□□ -1.84
CTGFP29279 RNU6-789P-201ENST00000517105 102 ntBASIC3.55□□□□□ -1.84
CTGFP29279 Y_RNA.721-201ENST00000517207 102 ntBASIC3.55□□□□□ -1.84
CTGFP29279 SKP1-203ENST00000517625 876 ntAPPRIS P4 TSL 3 BASIC3.55□□□□□ -1.84
CTGFP29279 IGKV2D-23-201ENST00000518179 286 ntBASIC3.55□□□□□ -1.84
CTGFP29279 IL7-206ENST00000520269 456 ntTSL 3 BASIC3.55□□□□□ -1.84
CTGFP29279 AC027018.1-202ENST00000534723 383 ntTSL 3 BASIC3.55□□□□□ -1.84
CTGFP29279 AC215217.1-201ENST00000562162 347 ntTSL 3 BASIC3.55□□□□□ -1.84
CTGFP29279 hsa-mir-548d-2.1-201ENST00000582790 97 ntBASIC3.55□□□□□ -1.84
CTGFP29279 AC003973.1-201ENST00000600071 546 ntTSL 4 BASIC3.55□□□□□ -1.84
CTGFP29279 AC104695.3-201ENST00000604052 296 ntBASIC3.55□□□□□ -1.84
CTGFP29279 AC034102.8-201ENST00000615146 484 ntBASIC3.55□□□□□ -1.84
CTGFP29279 UBE2E2-207ENST00000628311 267 ntTSL 5 BASIC3.55□□□□□ -1.84
CTGFP29279 RNF38-201ENST00000259605 5012 ntTSL 1 (best) BASIC3.55□□□□□ -1.84
CTGFP29279 ZNF480-202ENST00000335090 2722 ntTSL 3 BASIC3.55□□□□□ -1.84
CTGFP29279 PNPT1P2-201ENST00000456768 2050 ntBASIC3.55□□□□□ -1.84
CTGFP29279 SCOC-201ENST00000338517 1864 ntTSL 4 BASIC3.54□□□□□ -1.84
CTGFP29279 LINC01828-203ENST00000452716 3250 ntTSL 5 BASIC3.54□□□□□ -1.84
CTGFP29279 SKIL-203ENST00000426052 2757 ntTSL 2 BASIC3.54□□□□□ -1.84
CTGFP29279 OR4G2P-202ENST00000641004 1759 ntBASIC3.54□□□□□ -1.84
CTGFP29279 Y_RNA.80-201ENST00000362996 102 ntBASIC3.54□□□□□ -1.84
CTGFP29279 MDM4-202ENST00000367180 547 ntTSL 3 BASIC3.54□□□□□ -1.84
CTGFP29279 Y_RNA.473-201ENST00000384333 102 ntBASIC3.54□□□□□ -1.84
CTGFP29279 Y_RNA.485-201ENST00000384395 102 ntBASIC3.54□□□□□ -1.84
CTGFP29279 RNY1P14-201ENST00000384426 108 ntBASIC3.54□□□□□ -1.84
CTGFP29279 MIR548K-201ENST00000408406 116 ntBASIC3.54□□□□□ -1.84
CTGFP29279 RPLP0P7-201ENST00000416050 667 ntBASIC3.54□□□□□ -1.84
CTGFP29279 AL356968.1-201ENST00000416622 474 ntBASIC3.54□□□□□ -1.84
CTGFP29279 AL139281.1-201ENST00000422120 335 ntBASIC3.54□□□□□ -1.84
CTGFP29279 DPH3P2-201ENST00000422618 250 ntBASIC3.54□□□□□ -1.84
CTGFP29279 AC079799.1-201ENST00000430696 331 ntTSL 3 BASIC3.54□□□□□ -1.84
CTGFP29279 AL360169.1-201ENST00000435116 143 ntTSL 5 BASIC3.54□□□□□ -1.84
CTGFP29279 AC078993.1-203ENST00000435789 1037 ntTSL 5 BASIC3.54□□□□□ -1.84
CTGFP29279 USP9YP7-201ENST00000436723 430 ntBASIC3.54□□□□□ -1.84
CTGFP29279 USP9YP32-201ENST00000452432 430 ntBASIC3.54□□□□□ -1.84
CTGFP29279 TH2LCRR-203ENST00000457489 439 ntTSL 3 BASIC3.54□□□□□ -1.84
CTGFP29279 HMGB3P30-201ENST00000457863 606 ntBASIC3.54□□□□□ -1.84
CTGFP29279 snoU13.4-201ENST00000458916 104 ntBASIC3.54□□□□□ -1.84
CTGFP29279 RPL37P6-201ENST00000460682 294 ntBASIC3.54□□□□□ -1.84
CTGFP29279 AC087588.1-201ENST00000462203 316 ntBASIC3.54□□□□□ -1.84
CTGFP29279 OARD1-209ENST00000471367 401 ntTSL 2 BASIC3.54□□□□□ -1.84
CTGFP29279 LEKR1-205ENST00000477399 621 ntTSL 2 BASIC3.54□□□□□ -1.84
CTGFP29279 VWA8P1-201ENST00000510889 176 ntBASIC3.54□□□□□ -1.84
CTGFP29279 RNU6-256P-201ENST00000516747 97 ntBASIC3.54□□□□□ -1.84
CTGFP29279 AL136038.2-201ENST00000553983 283 ntTSL 3 BASIC3.54□□□□□ -1.84
CTGFP29279 AC091544.4-201ENST00000555268 342 ntBASIC3.54□□□□□ -1.84
CTGFP29279 MED28P6-201ENST00000558776 231 ntBASIC3.54□□□□□ -1.84
CTGFP29279 CERS3-AS1-201ENST00000560643 372 ntTSL 3 BASIC3.54□□□□□ -1.84
CTGFP29279 MIR3921-201ENST00000577308 85 ntBASIC3.54□□□□□ -1.84
CTGFP29279 AC015813.2-201ENST00000578794 711 ntAPPRIS P1 TSL 3 BASIC3.54□□□□□ -1.84
CTGFP29279 AC113195.1-201ENST00000579952 141 ntBASIC3.54□□□□□ -1.84
CTGFP29279 MIR3910-1-201ENST00000580936 111 ntBASIC3.54□□□□□ -1.84
CTGFP29279 LINC01928-201ENST00000591029 504 ntTSL 3 BASIC3.54□□□□□ -1.84
CTGFP29279 ZRANB2-AS2-213ENST00000591654 719 ntTSL 5 BASIC3.54□□□□□ -1.84
CTGFP29279 MIR15A-201ENST00000607334 83 ntBASIC3.54□□□□□ -1.84
CTGFP29279 MIR663AHG-231ENST00000609044 590 ntTSL 5 BASIC3.54□□□□□ -1.84
CTGFP29279 DUSP12P1-201ENST00000612874 516 ntBASIC3.54□□□□□ -1.84
CTGFP29279 DMD-230ENST00000620040 13746 ntAPPRIS ALT2 TSL 5 BASIC3.54□□□□□ -1.84
CTGFP29279 PHTF2-201ENST00000248550 4778 ntTSL 1 (best) BASIC3.54□□□□□ -1.84
Retrieved 100 of 98,524 protein–RNA pairs in 100.3 ms