Protein–RNA interactions for Protein: P25067

COL8A2, Collagen alpha-2(VIII) chain, humanhuman

Predictions only

Length 703 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL8A2P25067 AC127391.1-201ENST00000411737 98 ntBASIC1.59□□□□□ -2.15
COL8A2P25067 AC007283.2-201ENST00000424739 197 ntBASIC1.59□□□□□ -2.15
COL8A2P25067 AC244035.3-201ENST00000428399 271 ntTSL 2 BASIC1.59□□□□□ -2.15
COL8A2P25067 AL445488.1-202ENST00000430623 545 ntTSL 3 BASIC1.59□□□□□ -2.15
COL8A2P25067 AL117336.1-201ENST00000439198 380 ntTSL 2 BASIC1.59□□□□□ -2.15
COL8A2P25067 LINC02195-201ENST00000443373 294 ntTSL 3 BASIC1.59□□□□□ -2.15
COL8A2P25067 NEFMP1-201ENST00000443423 1006 ntBASIC1.59□□□□□ -2.15
COL8A2P25067 PSPHP1-201ENST00000450062 261 ntBASIC1.59□□□□□ -2.15
COL8A2P25067 AL359915.2-203ENST00000457043 540 ntTSL 3 BASIC1.59□□□□□ -2.15
COL8A2P25067 AL121769.1-201ENST00000469473 401 ntBASIC1.59□□□□□ -2.15
COL8A2P25067 LINC02101-201ENST00000505861 725 ntTSL 4 BASIC1.59□□□□□ -2.15
COL8A2P25067 AC010424.1-201ENST00000506336 297 ntBASIC1.59□□□□□ -2.15
COL8A2P25067 AC104663.1-201ENST00000508555 557 ntTSL 2 BASIC1.59□□□□□ -2.15
COL8A2P25067 AC105313.1-201ENST00000509121 353 ntBASIC1.59□□□□□ -2.15
COL8A2P25067 AC117522.2-201ENST00000510049 657 ntBASIC1.59□□□□□ -2.15
COL8A2P25067 AC110296.1-201ENST00000515680 341 ntTSL 3 BASIC1.59□□□□□ -2.15
COL8A2P25067 RNU7-51P-201ENST00000516560 62 ntBASIC1.59□□□□□ -2.15
COL8A2P25067 SNORA18.6-201ENST00000516792 115 ntBASIC1.59□□□□□ -2.15
COL8A2P25067 RNU6-1092P-201ENST00000516955 87 ntBASIC1.59□□□□□ -2.15
COL8A2P25067 AC022784.2-201ENST00000521298 328 ntTSL 2 BASIC1.59□□□□□ -2.15
COL8A2P25067 G2E3-AS1-202ENST00000550118 609 ntTSL 5 BASIC1.59□□□□□ -2.15
COL8A2P25067 RPS3AP4-201ENST00000555161 764 ntBASIC1.59□□□□□ -2.15
COL8A2P25067 AC023824.2-201ENST00000566185 400 ntBASIC1.59□□□□□ -2.15
COL8A2P25067 AC069061.2-202ENST00000580280 357 ntTSL 3 BASIC1.59□□□□□ -2.15
COL8A2P25067 AC040904.1-201ENST00000590850 223 ntBASIC1.59□□□□□ -2.15
COL8A2P25067 AL133173.2-201ENST00000614270 90 ntBASIC1.59□□□□□ -2.15
COL8A2P25067 AL353997.5-201ENST00000618886 171 ntBASIC1.59□□□□□ -2.15
COL8A2P25067 AL589994.2-201ENST00000621124 579 ntBASIC1.59□□□□□ -2.15
COL8A2P25067 PSMD5-AS1-215ENST00000640622 205 ntBASIC1.59□□□□□ -2.15
COL8A2P25067 FARSBP1-201ENST00000435808 1778 ntBASIC1.59□□□□□ -2.16
COL8A2P25067 XRCC4-205ENST00000511817 1636 ntAPPRIS P4 TSL 1 (best) BASIC1.58□□□□□ -2.16
COL8A2P25067 TBL1XR1-208ENST00000430069 7948 ntAPPRIS P1 TSL 1 (best) BASIC1.58□□□□□ -2.16
COL8A2P25067 AC004520.1-201ENST00000608362 1413 ntBASIC1.58□□□□□ -2.16
COL8A2P25067 AK9-203ENST00000368948 2478 ntTSL 5 BASIC1.58□□□□□ -2.16
COL8A2P25067 LRRC6-212ENST00000618342 1754 ntAPPRIS ALT1 TSL 5 BASIC1.58□□□□□ -2.16
COL8A2P25067 Y_RNA.245-201ENST00000364493 95 ntBASIC1.58□□□□□ -2.16
COL8A2P25067 RNU5E-6P-201ENST00000365574 115 ntBASIC1.58□□□□□ -2.16
COL8A2P25067 SNORA20.2-201ENST00000383922 131 ntBASIC1.58□□□□□ -2.16
COL8A2P25067 RPS3AP36-201ENST00000398190 775 ntBASIC1.58□□□□□ -2.16
COL8A2P25067 MIR888-201ENST00000401186 77 ntBASIC1.58□□□□□ -2.16
COL8A2P25067 RNU6-248P-201ENST00000410720 107 ntBASIC1.58□□□□□ -2.16
COL8A2P25067 AL365356.1-201ENST00000411512 736 ntTSL 3 BASIC1.58□□□□□ -2.16
COL8A2P25067 AC083867.1-201ENST00000413567 457 ntTSL 3 BASIC1.58□□□□□ -2.16
COL8A2P25067 AC093157.2-201ENST00000414686 671 ntTSL 5 BASIC1.58□□□□□ -2.16
COL8A2P25067 AC000123.1-201ENST00000418215 516 ntTSL 5 BASIC1.58□□□□□ -2.16
COL8A2P25067 AC073311.1-201ENST00000420146 505 ntTSL 5 BASIC1.58□□□□□ -2.16
COL8A2P25067 AC104651.1-201ENST00000427559 735 ntBASIC1.58□□□□□ -2.16
COL8A2P25067 AC009961.2-201ENST00000435771 251 ntBASIC1.58□□□□□ -2.16
COL8A2P25067 AC073614.1-201ENST00000438690 650 ntBASIC1.58□□□□□ -2.16
COL8A2P25067 USP9YP29-201ENST00000445112 563 ntBASIC1.58□□□□□ -2.16
COL8A2P25067 AL360221.1-201ENST00000445989 335 ntBASIC1.58□□□□□ -2.16
COL8A2P25067 AL136380.1-201ENST00000447970 162 ntBASIC1.58□□□□□ -2.16
COL8A2P25067 GAPDHP17-201ENST00000449858 1001 ntBASIC1.58□□□□□ -2.16
COL8A2P25067 AL589678.1-201ENST00000452685 561 ntTSL 3 BASIC1.58□□□□□ -2.16
COL8A2P25067 RAP1BP2-201ENST00000478270 544 ntBASIC1.58□□□□□ -2.16
COL8A2P25067 FAM92A1P2-202ENST00000504766 877 ntBASIC1.58□□□□□ -2.16
COL8A2P25067 ARL2BPP4-201ENST00000506854 471 ntBASIC1.58□□□□□ -2.16
COL8A2P25067 AL136537.1-201ENST00000508199 538 ntTSL 3 BASIC1.58□□□□□ -2.16
COL8A2P25067 AC098591.2-201ENST00000510152 315 ntBASIC1.58□□□□□ -2.16
COL8A2P25067 RNU5F-8P-201ENST00000515941 111 ntBASIC1.58□□□□□ -2.16
COL8A2P25067 SNORA31.3-201ENST00000516029 96 ntBASIC1.58□□□□□ -2.16
COL8A2P25067 Vault.3-201ENST00000516676 95 ntBASIC1.58□□□□□ -2.16
COL8A2P25067 RNA5SP290-201ENST00000517133 127 ntBASIC1.58□□□□□ -2.16
COL8A2P25067 SCARNA11.3-201ENST00000517276 130 ntBASIC1.58□□□□□ -2.16
COL8A2P25067 ZNF706-202ENST00000517844 604 ntAPPRIS P1 TSL 3 BASIC1.58□□□□□ -2.16
COL8A2P25067 BTF3P12-201ENST00000519620 469 ntBASIC1.58□□□□□ -2.16
COL8A2P25067 AP006587.4-201ENST00000526053 529 ntBASIC1.58□□□□□ -2.16
COL8A2P25067 AC044798.1-201ENST00000565146 418 ntTSL 5 BASIC1.58□□□□□ -2.16
COL8A2P25067 MIR3935-201ENST00000583472 104 ntBASIC1.58□□□□□ -2.16
COL8A2P25067 MIR3616-201ENST00000584070 92 ntBASIC1.58□□□□□ -2.16
COL8A2P25067 RSL24D1P11-201ENST00000591045 491 ntBASIC1.58□□□□□ -2.16
COL8A2P25067 LINC01897-203ENST00000591503 369 ntTSL 2 BASIC1.58□□□□□ -2.16
COL8A2P25067 AC090578.1-201ENST00000604955 591 ntBASIC1.58□□□□□ -2.16
COL8A2P25067 RN7SKP299-201ENST00000606679 301 ntBASIC1.58□□□□□ -2.16
COL8A2P25067 AC109347.2-201ENST00000610220 349 ntBASIC1.58□□□□□ -2.16
COL8A2P25067 DLEU2_1.1-201ENST00000612089 120 ntBASIC1.58□□□□□ -2.16
COL8A2P25067 DLEU2_1.2-201ENST00000614667 120 ntBASIC1.58□□□□□ -2.16
COL8A2P25067 AC090582.1-201ENST00000636321 199 ntBASIC1.58□□□□□ -2.16
COL8A2P25067 LINC01592-202ENST00000518540 2367 ntTSL 2 BASIC1.58□□□□□ -2.16
COL8A2P25067 MTND4P27-201ENST00000450813 1354 ntBASIC1.58□□□□□ -2.16
COL8A2P25067 AL137003.2-201ENST00000606924 2538 ntBASIC1.58□□□□□ -2.16
COL8A2P25067 AL390237.1-201ENST00000404226 1415 ntBASIC1.57□□□□□ -2.16
COL8A2P25067 CENPCP1-201ENST00000533085 2578 ntBASIC1.57□□□□□ -2.16
COL8A2P25067 ZBBX-205ENST00000455345 3185 ntAPPRIS ALT2 TSL 1 (best) BASIC1.57□□□□□ -2.16
COL8A2P25067 PICALM-209ENST00000528398 2049 ntTSL 2 BASIC1.57□□□□□ -2.16
COL8A2P25067 SI-201ENST00000264382 6011 ntAPPRIS P1 TSL 1 (best) BASIC1.57□□□□□ -2.16
COL8A2P25067 EDDM3A-201ENST00000326842 927 ntAPPRIS P1 TSL 1 (best) BASIC1.57□□□□□ -2.16
COL8A2P25067 MDM2-207ENST00000360430 891 ntTSL 1 (best) BASIC1.57□□□□□ -2.16
COL8A2P25067 RNU6-1167P-201ENST00000363227 94 ntBASIC1.57□□□□□ -2.16
COL8A2P25067 RNU6-960P-201ENST00000364056 120 ntBASIC1.57□□□□□ -2.16
COL8A2P25067 MIR218-1-201ENST00000384999 110 ntBASIC1.57□□□□□ -2.16
COL8A2P25067 RNU6-220P-201ENST00000390919 107 ntBASIC1.57□□□□□ -2.16
COL8A2P25067 RNU6-750P-201ENST00000390946 107 ntBASIC1.57□□□□□ -2.16
COL8A2P25067 RNA5SP213-201ENST00000391031 106 ntBASIC1.57□□□□□ -2.16
COL8A2P25067 RNU6-817P-201ENST00000391083 104 ntBASIC1.57□□□□□ -2.16
COL8A2P25067 5S_rRNA.2-201ENST00000391293 112 ntBASIC1.57□□□□□ -2.16
COL8A2P25067 RNU6-195P-201ENST00000411352 109 ntBASIC1.57□□□□□ -2.16
COL8A2P25067 AC002456.1-201ENST00000415965 317 ntTSL 5 BASIC1.57□□□□□ -2.16
COL8A2P25067 AL592435.1-201ENST00000416401 469 ntTSL 3 BASIC1.57□□□□□ -2.16
COL8A2P25067 C1DP2-201ENST00000418167 426 ntBASIC1.57□□□□□ -2.16
Retrieved 100 of 98,524 protein–RNA pairs in 87.1 ms