Protein–RNA interactions for Protein: P00352

ALDH1A1, Retinal dehydrogenase 1, humanhuman

Predictions only

Length 501 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ALDH1A1P00352 TRAV24-201ENST00000390453 343 ntAPPRIS P1 BASIC5.12□□□□□ -1.59
ALDH1A1P00352 RNU6-159P-201ENST00000391080 106 ntBASIC5.12□□□□□ -1.59
ALDH1A1P00352 SNORA40C-201ENST00000391285 128 ntBASIC5.12□□□□□ -1.59
ALDH1A1P00352 ELAVL2-204ENST00000397312 3805 ntAPPRIS P3 TSL 1 (best) BASIC5.12□□□□□ -1.59
ALDH1A1P00352 MIR1250-201ENST00000408098 113 ntBASIC5.12□□□□□ -1.59
ALDH1A1P00352 COX5BP7-201ENST00000414780 274 ntBASIC5.12□□□□□ -1.59
ALDH1A1P00352 AC092941.1-201ENST00000415940 427 ntTSL 5 BASIC5.12□□□□□ -1.59
ALDH1A1P00352 AC012671.1-201ENST00000451912 203 ntBASIC5.12□□□□□ -1.59
ALDH1A1P00352 AC114501.3-201ENST00000453648 164 ntTSL 5 BASIC5.12□□□□□ -1.59
ALDH1A1P00352 AL353743.2-204ENST00000456242 419 ntTSL 3 BASIC5.12□□□□□ -1.59
ALDH1A1P00352 Y_RNA.637-201ENST00000459424 114 ntBASIC5.12□□□□□ -1.59
ALDH1A1P00352 RN7SL691P-201ENST00000494487 301 ntBASIC5.12□□□□□ -1.59
ALDH1A1P00352 FCF1P8-201ENST00000510322 597 ntBASIC5.12□□□□□ -1.59
ALDH1A1P00352 RNU6-168P-201ENST00000516189 101 ntBASIC5.12□□□□□ -1.59
ALDH1A1P00352 AL359237.1-202ENST00000556168 487 ntTSL 5 BASIC5.12□□□□□ -1.59
ALDH1A1P00352 AC022968.1-201ENST00000567372 442 ntBASIC5.12□□□□□ -1.59
ALDH1A1P00352 AL357075.2-201ENST00000614906 189 ntBASIC5.12□□□□□ -1.59
ALDH1A1P00352 AC092628.2-201ENST00000622492 339 ntBASIC5.12□□□□□ -1.59
ALDH1A1P00352 CR392039.5-201ENST00000623201 510 ntBASIC5.12□□□□□ -1.59
ALDH1A1P00352 MIR4496-201ENST00000635896 61 ntBASIC5.12□□□□□ -1.59
ALDH1A1P00352 MYO9A-203ENST00000444904 7749 ntAPPRIS P2 TSL 5 BASIC5.12□□□□□ -1.59
ALDH1A1P00352 LINC01902-202ENST00000636983 4607 ntTSL 5 BASIC5.12□□□□□ -1.59
ALDH1A1P00352 ADGRG2-201ENST00000340581 3594 ntTSL 2 BASIC5.12□□□□□ -1.59
ALDH1A1P00352 UTS2B-201ENST00000340524 2395 ntAPPRIS P1 TSL 2 BASIC5.12□□□□□ -1.59
ALDH1A1P00352 SMG1P4-204ENST00000523028 4131 ntBASIC5.12□□□□□ -1.59
ALDH1A1P00352 TC2N-203ENST00000435962 5146 ntAPPRIS P1 TSL 2 BASIC5.11□□□□□ -1.59
ALDH1A1P00352 ZNF33A-201ENST00000307441 6196 ntAPPRIS ALT2 TSL 4 BASIC5.11□□□□□ -1.59
ALDH1A1P00352 DCDC1-211ENST00000597505 5352 ntAPPRIS ALT2 TSL 5 BASIC5.11□□□□□ -1.59
ALDH1A1P00352 TMEM255A-202ENST00000371352 2879 ntTSL 2 BASIC5.11□□□□□ -1.59
ALDH1A1P00352 ATF7IP-209ENST00000536444 8774 ntAPPRIS ALT2 TSL 1 (best) BASIC5.11□□□□□ -1.59
ALDH1A1P00352 CYP3A4-201ENST00000336411 2153 ntAPPRIS P1 TSL 1 (best) BASIC5.11□□□□□ -1.59
ALDH1A1P00352 FSBP-203ENST00000611249 2181 ntAPPRIS P1 TSL 5 BASIC5.11□□□□□ -1.59
ALDH1A1P00352 ERGIC2-212ENST00000611644 4961 ntTSL 5 BASIC5.11□□□□□ -1.59
ALDH1A1P00352 RNU6-105P-201ENST00000363909 104 ntBASIC5.11□□□□□ -1.59
ALDH1A1P00352 Y_RNA.319-201ENST00000365138 92 ntBASIC5.11□□□□□ -1.59
ALDH1A1P00352 UBBP2-201ENST00000376781 231 ntBASIC5.11□□□□□ -1.59
ALDH1A1P00352 U8.10-201ENST00000384260 133 ntBASIC5.11□□□□□ -1.59
ALDH1A1P00352 AC008065.1-201ENST00000428525 348 ntBASIC5.11□□□□□ -1.59
ALDH1A1P00352 RPL23AP52-201ENST00000439311 478 ntBASIC5.11□□□□□ -1.59
ALDH1A1P00352 GEMIN8P3-201ENST00000445417 720 ntBASIC5.11□□□□□ -1.59
ALDH1A1P00352 AL136164.1-201ENST00000456795 352 ntTSL 3 BASIC5.11□□□□□ -1.59
ALDH1A1P00352 HSPE1P6-201ENST00000479457 291 ntBASIC5.11□□□□□ -1.59
ALDH1A1P00352 AC004917.1-201ENST00000490856 575 ntTSL 4 BASIC5.11□□□□□ -1.59
ALDH1A1P00352 GYPA-208ENST00000512064 441 ntTSL 1 (best) BASIC5.11□□□□□ -1.59
ALDH1A1P00352 RNA5SP76-201ENST00000516277 87 ntBASIC5.11□□□□□ -1.59
ALDH1A1P00352 SCARNA13-201ENST00000516672 275 ntBASIC5.11□□□□□ -1.59
ALDH1A1P00352 AL355922.1-201ENST00000555624 337 ntTSL 3 BASIC5.11□□□□□ -1.59
ALDH1A1P00352 RDM1-221ENST00000617591 432 ntTSL 1 (best) BASIC5.11□□□□□ -1.59
ALDH1A1P00352 AL353748.2-201ENST00000622148 471 ntBASIC5.11□□□□□ -1.59
ALDH1A1P00352 AC039056.2-201ENST00000622261 511 ntBASIC5.11□□□□□ -1.59
ALDH1A1P00352 OR8J3-204ENST00000642058 3806 ntAPPRIS P1 BASIC5.11□□□□□ -1.59
ALDH1A1P00352 AC092376.2-201ENST00000622621 4116 ntBASIC5.11□□□□□ -1.59
ALDH1A1P00352 HERC4-205ENST00000412272 4211 ntTSL 1 (best) BASIC5.11□□□□□ -1.59
ALDH1A1P00352 RMDN2-203ENST00000402091 1973 ntTSL 2 BASIC5.11□□□□□ -1.59
ALDH1A1P00352 ETV1-205ENST00000405192 4402 ntTSL 1 (best) BASIC5.11□□□□□ -1.59
ALDH1A1P00352 OR4S2-202ENST00000641692 2211 ntAPPRIS P1 BASIC5.11□□□□□ -1.59
ALDH1A1P00352 SOCS5-201ENST00000306503 4771 ntAPPRIS P1 TSL 1 (best) BASIC5.11□□□□□ -1.59
ALDH1A1P00352 ATP13A3-211ENST00000619199 5227 ntTSL 2 BASIC5.1□□□□□ -1.59
ALDH1A1P00352 CCSER2-210ENST00000543283 5888 ntTSL 2 BASIC5.1□□□□□ -1.59
ALDH1A1P00352 LINC01197-202ENST00000555332 3568 ntTSL 3 BASIC5.1□□□□□ -1.59
ALDH1A1P00352 SLCO1A2-201ENST00000307378 7682 ntAPPRIS P1 TSL 1 (best) BASIC5.1□□□□□ -1.59
ALDH1A1P00352 GHR-202ENST00000357703 4316 ntTSL 5 BASIC5.1□□□□□ -1.59
ALDH1A1P00352 RNU6-137P-201ENST00000363680 108 ntBASIC5.1□□□□□ -1.59
ALDH1A1P00352 RNU6-166P-201ENST00000384371 107 ntBASIC5.1□□□□□ -1.59
ALDH1A1P00352 KTN1-202ENST00000395308 4134 ntAPPRIS ALT2 TSL 1 (best) BASIC5.1□□□□□ -1.59
ALDH1A1P00352 EIF1AXP1-201ENST00000419267 435 ntBASIC5.1□□□□□ -1.59
ALDH1A1P00352 AC097662.1-205ENST00000433324 241 ntTSL 5 BASIC5.1□□□□□ -1.59
ALDH1A1P00352 RPS29P7-201ENST00000439662 171 ntBASIC5.1□□□□□ -1.59
ALDH1A1P00352 MALRD1-204ENST00000454679 6880 ntAPPRIS P1 TSL 1 (best) BASIC5.1□□□□□ -1.59
ALDH1A1P00352 snoU13.3-201ENST00000459441 104 ntBASIC5.1□□□□□ -1.59
ALDH1A1P00352 AC012081.1-201ENST00000462382 477 ntTSL 3 BASIC5.1□□□□□ -1.59
ALDH1A1P00352 RN7SL812P-201ENST00000493791 279 ntBASIC5.1□□□□□ -1.59
ALDH1A1P00352 RNA5SP497-201ENST00000516081 97 ntBASIC5.1□□□□□ -1.59
ALDH1A1P00352 RNA5SP49-201ENST00000516450 115 ntBASIC5.1□□□□□ -1.59
ALDH1A1P00352 Y_RNA.712-201ENST00000517011 92 ntBASIC5.1□□□□□ -1.59
ALDH1A1P00352 IFITM8P-201ENST00000522529 394 ntBASIC5.1□□□□□ -1.59
ALDH1A1P00352 ZNF192P1-203ENST00000565888 810 ntBASIC5.1□□□□□ -1.59
ALDH1A1P00352 RN7SL703P-201ENST00000578485 302 ntBASIC5.1□□□□□ -1.59
ALDH1A1P00352 AC110597.3-202ENST00000583493 3289 ntTSL 5 BASIC5.1□□□□□ -1.59
ALDH1A1P00352 AC002545.1-201ENST00000592511 181 ntBASIC5.1□□□□□ -1.59
ALDH1A1P00352 AC023043.3-201ENST00000593113 385 ntBASIC5.1□□□□□ -1.59
ALDH1A1P00352 AC069200.1-201ENST00000609511 323 ntBASIC5.1□□□□□ -1.59
ALDH1A1P00352 GHR-213ENST00000622294 4312 ntTSL 5 BASIC5.1□□□□□ -1.59
ALDH1A1P00352 BBX-206ENST00000415149 8930 ntAPPRIS P3 TSL 1 (best) BASIC5.1□□□□□ -1.59
ALDH1A1P00352 STARD9-201ENST00000290607 15567 ntAPPRIS P1 TSL 5 BASIC5.1□□□□□ -1.59
ALDH1A1P00352 DLX6-AS1-201ENST00000430027 15364 ntTSL 2 BASIC5.1□□□□□ -1.59
ALDH1A1P00352 TFPI-201ENST00000233156 3885 ntAPPRIS P1 TSL 1 (best) BASIC5.1□□□□□ -1.59
ALDH1A1P00352 FAM111B-202ENST00000411426 3344 ntTSL 4 BASIC5.1□□□□□ -1.59
ALDH1A1P00352 RAG2-201ENST00000311485 2388 ntAPPRIS P1 TSL 1 (best) BASIC5.09□□□□□ -1.59
ALDH1A1P00352 USP8-201ENST00000307179 4243 ntAPPRIS P1 TSL 1 (best) BASIC5.09□□□□□ -1.59
ALDH1A1P00352 FAR2-203ENST00000547116 1787 ntTSL 2 BASIC5.09□□□□□ -1.59
ALDH1A1P00352 B3GALT2-201ENST00000367434 3274 ntAPPRIS P1 TSL 1 (best) BASIC5.09□□□□□ -1.59
ALDH1A1P00352 SKIL-201ENST00000259119 3057 ntAPPRIS P1 TSL 1 (best) BASIC5.09□□□□□ -1.59
ALDH1A1P00352 SLC24A2-202ENST00000341998 10749 ntAPPRIS P1 TSL 1 (best) BASIC5.09□□□□□ -1.59
ALDH1A1P00352 AL133243.3-201ENST00000617415 3004 ntBASIC5.09□□□□□ -1.59
ALDH1A1P00352 LTN1-202ENST00000389194 7749 ntTSL 1 (best) BASIC5.09□□□□□ -1.59
ALDH1A1P00352 Y_RNA.337-201ENST00000365312 102 ntBASIC5.09□□□□□ -1.59
ALDH1A1P00352 RNU6-178P-201ENST00000384631 104 ntBASIC5.09□□□□□ -1.59
ALDH1A1P00352 SNORA68.2-201ENST00000391263 128 ntBASIC5.09□□□□□ -1.59
ALDH1A1P00352 RPL21P65-201ENST00000406094 466 ntBASIC5.09□□□□□ -1.59
Retrieved 100 of 98,524 protein–RNA pairs in 108.1 ms