Protein–RNA interactions for Protein: O60741

HCN1, Potassium/sodium hyperpolarization-activated cyclic nucleotide-gated channel 1, humanhuman

Predictions only

Length 890 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HCN1O60741 AC116655.1-201ENST00000508324 901 ntBASIC2.11□□□□□ -2.07
HCN1O60741 AC091965.2-201ENST00000512324 613 ntBASIC2.11□□□□□ -2.07
HCN1O60741 Y_RNA.688-201ENST00000516565 95 ntBASIC2.11□□□□□ -2.07
HCN1O60741 Vault.3-201ENST00000516676 95 ntBASIC2.11□□□□□ -2.07
HCN1O60741 AP003465.1-201ENST00000520575 382 ntTSL 2 BASIC2.11□□□□□ -2.07
HCN1O60741 AP000889.2-201ENST00000532684 490 ntBASIC2.11□□□□□ -2.07
HCN1O60741 AP002453.2-201ENST00000533503 320 ntBASIC2.11□□□□□ -2.07
HCN1O60741 AC013417.1-201ENST00000549896 271 ntTSL 5 BASIC2.11□□□□□ -2.07
HCN1O60741 SNRPGP18-201ENST00000553000 214 ntBASIC2.11□□□□□ -2.07
HCN1O60741 AL352955.1-201ENST00000555490 332 ntTSL 3 BASIC2.11□□□□□ -2.07
HCN1O60741 AC016987.2-201ENST00000560696 351 ntTSL 3 BASIC2.11□□□□□ -2.07
HCN1O60741 AC025678.1-201ENST00000567861 338 ntBASIC2.11□□□□□ -2.07
HCN1O60741 AC137800.2-201ENST00000574375 120 ntBASIC2.11□□□□□ -2.07
HCN1O60741 MIR1273D-201ENST00000577266 86 ntBASIC2.11□□□□□ -2.07
HCN1O60741 DEFB131E-202ENST00000602581 683 ntBASIC2.11□□□□□ -2.07
HCN1O60741 SEPT7P9-203ENST00000604116 343 ntBASIC2.11□□□□□ -2.07
HCN1O60741 AL158063.1-201ENST00000615349 536 ntBASIC2.11□□□□□ -2.07
HCN1O60741 AL359547.2-201ENST00000615810 418 ntBASIC2.11□□□□□ -2.07
HCN1O60741 TAB2-205ENST00000538427 4240 ntAPPRIS P1 TSL 5 BASIC2.11□□□□□ -2.07
HCN1O60741 TEX21P-201ENST00000447107 1476 ntBASIC2.11□□□□□ -2.07
HCN1O60741 AC006020.1-201ENST00000420179 1854 ntBASIC2.11□□□□□ -2.07
HCN1O60741 ELL2P3-201ENST00000457883 1602 ntBASIC2.1□□□□□ -2.07
HCN1O60741 HSFY2-201ENST00000304790 1444 ntAPPRIS P5 TSL 1 (best) BASIC2.1□□□□□ -2.07
HCN1O60741 HSFY1-201ENST00000307393 1444 ntAPPRIS P5 TSL 1 (best) BASIC2.1□□□□□ -2.07
HCN1O60741 SNORD3E-201ENST00000362899 217 ntBASIC2.1□□□□□ -2.07
HCN1O60741 RNU1-91P-201ENST00000364746 163 ntBASIC2.1□□□□□ -2.07
HCN1O60741 RNU6-1280P-201ENST00000365211 107 ntBASIC2.1□□□□□ -2.07
HCN1O60741 RNU6-395P-201ENST00000365662 106 ntBASIC2.1□□□□□ -2.07
HCN1O60741 TSHB-202ENST00000369517 474 ntAPPRIS P1 TSL 1 (best) BASIC2.1□□□□□ -2.07
HCN1O60741 MIR147B-201ENST00000390185 80 ntBASIC2.1□□□□□ -2.07
HCN1O60741 CISD1P1-201ENST00000393907 327 ntBASIC2.1□□□□□ -2.07
HCN1O60741 BTF3P7-201ENST00000407097 488 ntBASIC2.1□□□□□ -2.07
HCN1O60741 RNU6-248P-201ENST00000410720 107 ntBASIC2.1□□□□□ -2.07
HCN1O60741 DPH3P2-201ENST00000422618 250 ntBASIC2.1□□□□□ -2.07
HCN1O60741 U51244.1-201ENST00000423120 374 ntTSL 3 BASIC2.1□□□□□ -2.07
HCN1O60741 LINC01817-201ENST00000429317 564 ntTSL 4 BASIC2.1□□□□□ -2.07
HCN1O60741 AL139415.2-201ENST00000431968 163 ntBASIC2.1□□□□□ -2.07
HCN1O60741 MTATP6P16-201ENST00000434543 526 ntBASIC2.1□□□□□ -2.07
HCN1O60741 AC073614.1-201ENST00000438690 650 ntBASIC2.1□□□□□ -2.07
HCN1O60741 AL117336.1-201ENST00000439198 380 ntTSL 2 BASIC2.1□□□□□ -2.07
HCN1O60741 MTCYBP1-201ENST00000454315 1119 ntBASIC2.1□□□□□ -2.07
HCN1O60741 AL583843.1-201ENST00000456070 346 ntBASIC2.1□□□□□ -2.07
HCN1O60741 DYNLL1P5-201ENST00000467158 270 ntBASIC2.1□□□□□ -2.07
HCN1O60741 AC079943.2-201ENST00000488999 716 ntTSL 3 BASIC2.1□□□□□ -2.07
HCN1O60741 AC023194.1-201ENST00000493084 308 ntBASIC2.1□□□□□ -2.07
HCN1O60741 AC090255.1-201ENST00000495779 349 ntBASIC2.1□□□□□ -2.07
HCN1O60741 AL359273.1-202ENST00000505585 905 ntTSL 1 (best) BASIC2.1□□□□□ -2.07
HCN1O60741 RBBP4P6-201ENST00000508098 202 ntBASIC2.1□□□□□ -2.07
HCN1O60741 AC079349.1-201ENST00000509096 589 ntTSL 2 BASIC2.1□□□□□ -2.07
HCN1O60741 AC117522.1-201ENST00000509821 380 ntBASIC2.1□□□□□ -2.07
HCN1O60741 AC117522.2-201ENST00000510049 657 ntBASIC2.1□□□□□ -2.07
HCN1O60741 LINC02500-201ENST00000512547 493 ntTSL 3 BASIC2.1□□□□□ -2.07
HCN1O60741 LINC02100-201ENST00000512978 238 ntTSL 3 BASIC2.1□□□□□ -2.07
HCN1O60741 Y_RNA.695-201ENST00000516715 107 ntBASIC2.1□□□□□ -2.07
HCN1O60741 SNORA18.6-201ENST00000516792 115 ntBASIC2.1□□□□□ -2.07
HCN1O60741 AC090572.1-201ENST00000519251 160 ntBASIC2.1□□□□□ -2.07
HCN1O60741 ADI1P3-201ENST00000549509 470 ntBASIC2.1□□□□□ -2.07
HCN1O60741 AC110760.3-201ENST00000598794 467 ntBASIC2.1□□□□□ -2.07
HCN1O60741 AL022154.1-201ENST00000604698 785 ntBASIC2.1□□□□□ -2.07
HCN1O60741 AC091965.1-202ENST00000607662 397 ntTSL 3 BASIC2.1□□□□□ -2.07
HCN1O60741 NCRUPAR_2.1-201ENST00000616308 99 ntBASIC2.1□□□□□ -2.07
HCN1O60741 Z69908.1-201ENST00000622603 247 ntBASIC2.1□□□□□ -2.07
HCN1O60741 Clostridiales-1.3-201ENST00000637703 147 ntBASIC2.1□□□□□ -2.07
HCN1O60741 PTPRQ-209ENST00000616559 8165 ntTSL 5 BASIC2.1□□□□□ -2.07
HCN1O60741 MIER3-204ENST00000381226 5210 ntAPPRIS ALT1 TSL 1 (best) BASIC2.1□□□□□ -2.07
HCN1O60741 ZBED5-201ENST00000413761 2512 ntAPPRIS P1 TSL 1 (best) BASIC2.1□□□□□ -2.07
HCN1O60741 CCDC30-201ENST00000340612 2664 ntAPPRIS P2 TSL 5 BASIC2.09□□□□□ -2.07
HCN1O60741 COMMD6-201ENST00000355801 486 ntTSL 2 BASIC2.09□□□□□ -2.07
HCN1O60741 RNU6-61P-201ENST00000365528 109 ntBASIC2.09□□□□□ -2.07
HCN1O60741 RN7SKP223-201ENST00000410582 62 ntBASIC2.09□□□□□ -2.07
HCN1O60741 LINC00301-202ENST00000412599 772 ntTSL 1 (best) BASIC2.09□□□□□ -2.07
HCN1O60741 AC016831.2-201ENST00000417179 352 ntBASIC2.09□□□□□ -2.07
HCN1O60741 LINC02331-201ENST00000418927 602 ntTSL 5 BASIC2.09□□□□□ -2.07
HCN1O60741 AL162726.4-201ENST00000422010 673 ntTSL 5 BASIC2.09□□□□□ -2.07
HCN1O60741 AL160275.3-201ENST00000423876 471 ntBASIC2.09□□□□□ -2.07
HCN1O60741 AL157884.2-201ENST00000424177 551 ntTSL 3 BASIC2.09□□□□□ -2.07
HCN1O60741 RPS15AP28-201ENST00000435088 386 ntBASIC2.09□□□□□ -2.07
HCN1O60741 FABP5P14-201ENST00000437273 393 ntBASIC2.09□□□□□ -2.07
HCN1O60741 RPS15AP9-201ENST00000439856 381 ntBASIC2.09□□□□□ -2.07
HCN1O60741 SATB1-AS1-204ENST00000453361 726 ntTSL 3 BASIC2.09□□□□□ -2.07
HCN1O60741 BTF3P15-201ENST00000455606 336 ntBASIC2.09□□□□□ -2.07
HCN1O60741 KLF3P2-201ENST00000465138 268 ntBASIC2.09□□□□□ -2.07
HCN1O60741 LINC02077-201ENST00000465795 409 ntTSL 3 BASIC2.09□□□□□ -2.07
HCN1O60741 AC011005.2-201ENST00000487324 359 ntBASIC2.09□□□□□ -2.07
HCN1O60741 RPL23AP49-201ENST00000492925 468 ntBASIC2.09□□□□□ -2.07
HCN1O60741 LINC02377-202ENST00000505436 523 ntTSL 5 BASIC2.09□□□□□ -2.07
HCN1O60741 AL136537.1-201ENST00000508199 538 ntTSL 3 BASIC2.09□□□□□ -2.07
HCN1O60741 LINC02174-201ENST00000508977 553 ntTSL 3 BASIC2.09□□□□□ -2.07
HCN1O60741 RNU7-193P-201ENST00000516723 65 ntBASIC2.09□□□□□ -2.07
HCN1O60741 ACA59.2-201ENST00000517061 156 ntBASIC2.09□□□□□ -2.07
HCN1O60741 AC068992.1-202ENST00000519280 270 ntTSL 3 BASIC2.09□□□□□ -2.07
HCN1O60741 MTCYBP20-201ENST00000524239 1129 ntBASIC2.09□□□□□ -2.07
HCN1O60741 CYCSP26-201ENST00000534107 320 ntBASIC2.09□□□□□ -2.07
HCN1O60741 AC087883.1-201ENST00000551882 391 ntBASIC2.09□□□□□ -2.07
HCN1O60741 AC026464.5-201ENST00000562497 722 ntBASIC2.09□□□□□ -2.07
HCN1O60741 PWRN1-209ENST00000568019 359 ntTSL 3 BASIC2.09□□□□□ -2.07
HCN1O60741 AC015813.2-201ENST00000578794 711 ntAPPRIS P1 TSL 3 BASIC2.09□□□□□ -2.07
HCN1O60741 MIR4765-201ENST00000585007 77 ntBASIC2.09□□□□□ -2.07
HCN1O60741 AC008521.1-201ENST00000587471 187 ntBASIC2.09□□□□□ -2.07
HCN1O60741 AL139286.2-201ENST00000606838 396 ntBASIC2.09□□□□□ -2.07
Retrieved 100 of 98,524 protein–RNA pairs in 88.1 ms