Protein–RNA interactions for Protein: O43638

FOXS1, Forkhead box protein S1, humanhuman

Predictions only

Length 330 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
FOXS1O43638 AL451050.1-201ENST00000450126 415 ntBASIC3.58□□□□□ -1.84
FOXS1O43638 IFNWP4-201ENST00000453148 294 ntBASIC3.58□□□□□ -1.84
FOXS1O43638 AL136097.1-201ENST00000456945 913 ntBASIC3.58□□□□□ -1.84
FOXS1O43638 RPS29P27-201ENST00000463711 170 ntBASIC3.58□□□□□ -1.84
FOXS1O43638 RNA5SP208-201ENST00000516156 78 ntBASIC3.58□□□□□ -1.84
FOXS1O43638 RNU6-1338P-201ENST00000516328 91 ntBASIC3.58□□□□□ -1.84
FOXS1O43638 AP002770.2-201ENST00000543613 532 ntBASIC3.58□□□□□ -1.84
FOXS1O43638 AC093023.1-201ENST00000547375 507 ntBASIC3.58□□□□□ -1.84
FOXS1O43638 SYF2P1-201ENST00000550658 413 ntBASIC3.58□□□□□ -1.84
FOXS1O43638 AL133166.1-202ENST00000550975 565 ntTSL 4 BASIC3.58□□□□□ -1.84
FOXS1O43638 AC012409.1-201ENST00000560176 358 ntTSL 3 BASIC3.58□□□□□ -1.84
FOXS1O43638 MIR5187-201ENST00000583479 76 ntBASIC3.58□□□□□ -1.84
FOXS1O43638 AC008121.1-201ENST00000603244 268 ntBASIC3.58□□□□□ -1.84
FOXS1O43638 RNU1-30P-201ENST00000606575 163 ntBASIC3.58□□□□□ -1.84
FOXS1O43638 AC092636.1-201ENST00000608609 415 ntTSL 2 BASIC3.58□□□□□ -1.84
FOXS1O43638 LINC00310-206ENST00000609947 892 ntTSL 5 BASIC3.58□□□□□ -1.84
FOXS1O43638 Hammerhead_HH10.1-201ENST00000620658 125 ntBASIC3.58□□□□□ -1.84
FOXS1O43638 C4orf22-209ENST00000621014 228 ntTSL 3 BASIC3.58□□□□□ -1.84
FOXS1O43638 MIR4727-201ENST00000622232 55 ntBASIC3.58□□□□□ -1.84
FOXS1O43638 PAPOLA-202ENST00000392990 2588 ntTSL 5 BASIC3.58□□□□□ -1.84
FOXS1O43638 BBX-203ENST00000402543 3980 ntTSL 5 BASIC3.58□□□□□ -1.84
FOXS1O43638 MFN1-201ENST00000263969 2754 ntAPPRIS P1 TSL 1 (best) BASIC3.58□□□□□ -1.84
FOXS1O43638 EPC1-203ENST00000375110 3909 ntTSL 1 (best) BASIC3.58□□□□□ -1.84
FOXS1O43638 N4BP2L2-201ENST00000267068 9427 ntAPPRIS P1 TSL 1 (best) BASIC3.58□□□□□ -1.84
FOXS1O43638 CCNH-206ENST00000508855 2391 ntTSL 1 (best) BASIC3.58□□□□□ -1.84
FOXS1O43638 ADGRG4-201ENST00000370652 9820 ntAPPRIS P2 TSL 5 BASIC3.58□□□□□ -1.84
FOXS1O43638 ZCCHC7-202ENST00000336755 2619 ntAPPRIS P1 TSL 2 BASIC3.57□□□□□ -1.84
FOXS1O43638 GYPA-202ENST00000360771 2659 ntAPPRIS P3 TSL 1 (best) BASIC3.57□□□□□ -1.84
FOXS1O43638 PCDH11X-205ENST00000373094 9179 ntAPPRIS P4 TSL 1 (best) BASIC3.57□□□□□ -1.84
FOXS1O43638 RBBP6-203ENST00000381039 3384 ntTSL 1 (best) BASIC3.57□□□□□ -1.84
FOXS1O43638 TET2-204ENST00000413648 4973 ntTSL 1 (best) BASIC3.57□□□□□ -1.84
FOXS1O43638 DEFB108F-201ENST00000344638 222 ntBASIC3.57□□□□□ -1.84
FOXS1O43638 Y_RNA.54-201ENST00000362766 105 ntBASIC3.57□□□□□ -1.84
FOXS1O43638 Y_RNA.200-201ENST00000364018 102 ntBASIC3.57□□□□□ -1.84
FOXS1O43638 RNU6-173P-201ENST00000364215 104 ntBASIC3.57□□□□□ -1.84
FOXS1O43638 Y_RNA.277-201ENST00000364754 102 ntBASIC3.57□□□□□ -1.84
FOXS1O43638 Y_RNA.358-201ENST00000365491 99 ntBASIC3.57□□□□□ -1.84
FOXS1O43638 MMS22L-202ENST00000369251 3949 ntTSL 2 BASIC3.57□□□□□ -1.84
FOXS1O43638 MIS12-201ENST00000381165 2505 ntAPPRIS P1 TSL 1 (best) BASIC3.57□□□□□ -1.84
FOXS1O43638 TRAV7-201ENST00000390429 337 ntAPPRIS P1 BASIC3.57□□□□□ -1.84
FOXS1O43638 RNU6ATAC-201ENST00000408749 126 ntBASIC3.57□□□□□ -1.84
FOXS1O43638 RAB9AP3-201ENST00000412737 573 ntBASIC3.57□□□□□ -1.84
FOXS1O43638 HSPA8P1-201ENST00000425843 1833 ntBASIC3.57□□□□□ -1.84
FOXS1O43638 ARPP21-211ENST00000427542 568 ntTSL 4 BASIC3.57□□□□□ -1.84
FOXS1O43638 MTCO3P29-201ENST00000432119 779 ntBASIC3.57□□□□□ -1.84
FOXS1O43638 BX679664.1-201ENST00000434429 253 ntBASIC3.57□□□□□ -1.84
FOXS1O43638 RAB9AP1-201ENST00000449393 573 ntBASIC3.57□□□□□ -1.84
FOXS1O43638 SNORA84-201ENST00000459229 133 ntBASIC3.57□□□□□ -1.84
FOXS1O43638 AK3P2-201ENST00000507976 429 ntBASIC3.57□□□□□ -1.84
FOXS1O43638 AL359273.1-201ENST00000510918 627 ntBASIC3.57□□□□□ -1.84
FOXS1O43638 LINC02122-201ENST00000511395 577 ntTSL 4 BASIC3.57□□□□□ -1.84
FOXS1O43638 AC022868.1-201ENST00000517767 391 ntBASIC3.57□□□□□ -1.84
FOXS1O43638 MGAT4C-207ENST00000552808 1937 ntAPPRIS P1 TSL 2 BASIC3.57□□□□□ -1.84
FOXS1O43638 HMGB1P14-201ENST00000557424 591 ntBASIC3.57□□□□□ -1.84
FOXS1O43638 HNRNPCP4-201ENST00000571636 900 ntBASIC3.57□□□□□ -1.84
FOXS1O43638 FAM60BP-201ENST00000578364 658 ntBASIC3.57□□□□□ -1.84
FOXS1O43638 AL137849.1-201ENST00000604767 169 ntBASIC3.57□□□□□ -1.84
FOXS1O43638 AC005046.1-201ENST00000608515 625 ntBASIC3.57□□□□□ -1.84
FOXS1O43638 AL138686.1-201ENST00000612699 315 ntTSL 3 BASIC3.57□□□□□ -1.84
FOXS1O43638 LINC00901.1-201ENST00000617252 152 ntBASIC3.57□□□□□ -1.84
FOXS1O43638 AC034229.5-201ENST00000624258 185 ntBASIC3.57□□□□□ -1.84
FOXS1O43638 AL158064.1-201ENST00000627044 2242 ntTSL 4 BASIC3.57□□□□□ -1.84
FOXS1O43638 CCNYL2-203ENST00000638057 730 ntTSL 3 BASIC3.57□□□□□ -1.84
FOXS1O43638 PIGN-229ENST00000638936 4233 ntAPPRIS P1 TSL 5 BASIC3.57□□□□□ -1.84
FOXS1O43638 SEL1L2-202ENST00000378072 1892 ntTSL 2 BASIC3.56□□□□□ -1.84
FOXS1O43638 PSG1-205ENST00000595124 1692 ntTSL 2 BASIC3.56□□□□□ -1.84
FOXS1O43638 MT-ND1-201ENST00000361390 956 ntAPPRIS P1 BASIC3.56□□□□□ -1.84
FOXS1O43638 MT-CO2-201ENST00000361739 684 ntAPPRIS P1 BASIC3.56□□□□□ -1.84
FOXS1O43638 RNU6-1266P-201ENST00000362794 105 ntBASIC3.56□□□□□ -1.84
FOXS1O43638 Y_RNA.269-201ENST00000364685 89 ntBASIC3.56□□□□□ -1.84
FOXS1O43638 Y_RNA.405-201ENST00000383979 100 ntBASIC3.56□□□□□ -1.84
FOXS1O43638 Y_RNA.451-201ENST00000384200 100 ntBASIC3.56□□□□□ -1.84
FOXS1O43638 Y_RNA.524-201ENST00000384564 100 ntBASIC3.56□□□□□ -1.84
FOXS1O43638 Y_RNA.561-201ENST00000384694 100 ntBASIC3.56□□□□□ -1.84
FOXS1O43638 Y_RNA.581-201ENST00000391017 97 ntBASIC3.56□□□□□ -1.84
FOXS1O43638 PCNPP3-201ENST00000393579 471 ntBASIC3.56□□□□□ -1.84
FOXS1O43638 SNRPG-202ENST00000413456 398 ntTSL 3 BASIC3.56□□□□□ -1.84
FOXS1O43638 Z85995.1-201ENST00000415547 335 ntBASIC3.56□□□□□ -1.84
FOXS1O43638 TMEM167AP1-201ENST00000423409 219 ntBASIC3.56□□□□□ -1.84
FOXS1O43638 TOMM20P4-201ENST00000427861 435 ntBASIC3.56□□□□□ -1.84
FOXS1O43638 ATP2B2-IT1-201ENST00000440152 472 ntTSL 3 BASIC3.56□□□□□ -1.84
FOXS1O43638 AL133547.1-201ENST00000448546 220 ntBASIC3.56□□□□□ -1.84
FOXS1O43638 SNRPG-205ENST00000449935 428 ntTSL 1 (best) BASIC3.56□□□□□ -1.84
FOXS1O43638 GAS5-221ENST00000450589 632 ntTSL 1 (best) BASIC3.56□□□□□ -1.84
FOXS1O43638 RPS20P22-201ENST00000473700 357 ntBASIC3.56□□□□□ -1.84
FOXS1O43638 UBE2CP3-201ENST00000502715 450 ntBASIC3.56□□□□□ -1.84
FOXS1O43638 SCARNA15.2-201ENST00000516409 127 ntBASIC3.56□□□□□ -1.84
FOXS1O43638 SNORA67.7-201ENST00000516664 135 ntBASIC3.56□□□□□ -1.84
FOXS1O43638 MIR2355-201ENST00000517199 87 ntBASIC3.56□□□□□ -1.84
FOXS1O43638 AC005476.1-201ENST00000554427 397 ntBASIC3.56□□□□□ -1.84
FOXS1O43638 MIR1254-2-201ENST00000579553 63 ntBASIC3.56□□□□□ -1.84
FOXS1O43638 MIR3158-1-201ENST00000583596 81 ntBASIC3.56□□□□□ -1.84
FOXS1O43638 AL645944.1-201ENST00000603857 493 ntBASIC3.56□□□□□ -1.84
FOXS1O43638 CENPF-206ENST00000614578 528 ntTSL 5 BASIC3.56□□□□□ -1.84
FOXS1O43638 CR392039.5-201ENST00000623201 510 ntBASIC3.56□□□□□ -1.84
FOXS1O43638 BMS1P21-201ENST00000634565 365 ntBASIC3.56□□□□□ -1.84
FOXS1O43638 AC012442.3-202ENST00000636742 206 ntBASIC3.56□□□□□ -1.84
FOXS1O43638 POU2F1-204ENST00000367866 13905 ntAPPRIS P3 TSL 1 (best) BASIC3.56□□□□□ -1.84
FOXS1O43638 MCF2-203ENST00000370576 3688 ntAPPRIS P3 TSL 1 (best) BASIC3.56□□□□□ -1.84
FOXS1O43638 AL592437.2-201ENST00000421655 2434 ntBASIC3.56□□□□□ -1.84
Retrieved 100 of 98,524 protein–RNA pairs in 98.5 ms