Protein–RNA interactions for Protein: O14545

TRAFD1, TRAF-type zinc finger domain-containing protein 1, humanhuman

Predicted RBP Predictions only

Length 582 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRAFD1O14545 USP9YP27-201ENST00000418455 438 ntBASIC2.51□□□□□ -2.01
TRAFD1O14545 AC133106.1-201ENST00000419029 397 ntTSL 3 BASIC2.51□□□□□ -2.01
TRAFD1O14545 AC018816.1-203ENST00000441894 338 ntTSL 3 BASIC2.51□□□□□ -2.01
TRAFD1O14545 LINC00571-203ENST00000454060 525 ntTSL 3 BASIC2.51□□□□□ -2.01
TRAFD1O14545 AL121769.1-201ENST00000469473 401 ntBASIC2.51□□□□□ -2.01
TRAFD1O14545 PLCH1-AS2-201ENST00000472913 408 ntTSL 2 BASIC2.51□□□□□ -2.01
TRAFD1O14545 RPS15AP34-201ENST00000487776 387 ntBASIC2.51□□□□□ -2.01
TRAFD1O14545 AC114781.4-201ENST00000513707 639 ntBASIC2.51□□□□□ -2.01
TRAFD1O14545 RNA5SP401-201ENST00000515920 127 ntBASIC2.51□□□□□ -2.01
TRAFD1O14545 Y_RNA.693-201ENST00000516641 110 ntBASIC2.51□□□□□ -2.01
TRAFD1O14545 AC109329.2-201ENST00000519658 482 ntBASIC2.51□□□□□ -2.01
TRAFD1O14545 RPL7P20-201ENST00000520308 745 ntBASIC2.51□□□□□ -2.01
TRAFD1O14545 AC021242.2-203ENST00000521842 687 ntTSL 3 BASIC2.51□□□□□ -2.01
TRAFD1O14545 AC104383.1-201ENST00000530297 370 ntBASIC2.51□□□□□ -2.01
TRAFD1O14545 AC008115.2-201ENST00000539988 241 ntTSL 3 BASIC2.51□□□□□ -2.01
TRAFD1O14545 HMGB1P33-201ENST00000563485 527 ntBASIC2.51□□□□□ -2.01
TRAFD1O14545 AC007495.2-202ENST00000564102 535 ntTSL 4 BASIC2.51□□□□□ -2.01
TRAFD1O14545 AC025678.1-201ENST00000567861 338 ntBASIC2.51□□□□□ -2.01
TRAFD1O14545 AP001330.5-201ENST00000607176 411 ntBASIC2.51□□□□□ -2.01
TRAFD1O14545 CERS6-AS1-209ENST00000609766 642 ntTSL 5 BASIC2.51□□□□□ -2.01
TRAFD1O14545 CNOT1-223ENST00000628857 291 ntTSL 5 BASIC2.51□□□□□ -2.01
TRAFD1O14545 ELF2P3-201ENST00000445099 1506 ntBASIC2.51□□□□□ -2.01
TRAFD1O14545 SEL1L2-201ENST00000284951 2224 ntAPPRIS P1 TSL 5 BASIC2.5□□□□□ -2.01
TRAFD1O14545 BCHE-201ENST00000264381 2454 ntAPPRIS P1 TSL 1 (best) BASIC2.5□□□□□ -2.01
TRAFD1O14545 CEP44-203ENST00000426172 3037 ntTSL 5 BASIC2.5□□□□□ -2.01
TRAFD1O14545 AC006020.1-201ENST00000420179 1854 ntBASIC2.5□□□□□ -2.01
TRAFD1O14545 SMARCAD1-206ENST00000509418 2348 ntTSL 2 BASIC2.5□□□□□ -2.01
TRAFD1O14545 DNAH7-201ENST00000312428 12394 ntAPPRIS P1 TSL 1 (best) BASIC2.5□□□□□ -2.01
TRAFD1O14545 ZBBX-201ENST00000307529 3071 ntAPPRIS ALT2 TSL 5 BASIC2.5□□□□□ -2.01
TRAFD1O14545 ZBBX-204ENST00000392767 3071 ntAPPRIS ALT2 TSL 5 BASIC2.5□□□□□ -2.01
TRAFD1O14545 C5orf46-201ENST00000318315 506 ntAPPRIS P2 TSL 1 (best) BASIC2.5□□□□□ -2.01
TRAFD1O14545 SNORA69-201ENST00000383895 132 ntBASIC2.5□□□□□ -2.01
TRAFD1O14545 MIR578-201ENST00000384828 96 ntBASIC2.5□□□□□ -2.01
TRAFD1O14545 MIR767-201ENST00000390228 109 ntBASIC2.5□□□□□ -2.01
TRAFD1O14545 TRAV40-201ENST00000390467 317 ntAPPRIS P1 BASIC2.5□□□□□ -2.01
TRAFD1O14545 SNORD37.1-201ENST00000390968 65 ntBASIC2.5□□□□□ -2.01
TRAFD1O14545 RNU6-1025P-201ENST00000410629 104 ntBASIC2.5□□□□□ -2.01
TRAFD1O14545 AC003092.1-201ENST00000415536 639 ntTSL 3 BASIC2.5□□□□□ -2.01
TRAFD1O14545 AC006333.1-201ENST00000422401 410 ntTSL 3 BASIC2.5□□□□□ -2.01
TRAFD1O14545 LINC01817-201ENST00000429317 564 ntTSL 4 BASIC2.5□□□□□ -2.01
TRAFD1O14545 AC092427.1-202ENST00000430569 476 ntBASIC2.5□□□□□ -2.01
TRAFD1O14545 AL596276.1-201ENST00000434465 418 ntBASIC2.5□□□□□ -2.01
TRAFD1O14545 AC016691.1-201ENST00000441321 413 ntBASIC2.5□□□□□ -2.01
TRAFD1O14545 AC104058.1-201ENST00000448028 297 ntBASIC2.5□□□□□ -2.01
TRAFD1O14545 AC005062.1-201ENST00000457921 566 ntTSL 3 BASIC2.5□□□□□ -2.01
TRAFD1O14545 AC012055.2-201ENST00000504167 335 ntTSL 3 BASIC2.5□□□□□ -2.01
TRAFD1O14545 MTCO3P9-201ENST00000506989 781 ntBASIC2.5□□□□□ -2.01
TRAFD1O14545 AC098591.2-201ENST00000510152 315 ntBASIC2.5□□□□□ -2.01
TRAFD1O14545 LNX1-AS1-203ENST00000511989 488 ntTSL 2 BASIC2.5□□□□□ -2.01
TRAFD1O14545 RNU6-1281P-201ENST00000516223 105 ntBASIC2.5□□□□□ -2.01
TRAFD1O14545 RN7SKP219-201ENST00000516825 296 ntBASIC2.5□□□□□ -2.01
TRAFD1O14545 RNU6-685P-201ENST00000517088 95 ntBASIC2.5□□□□□ -2.01
TRAFD1O14545 SUB1P1-201ENST00000524415 382 ntBASIC2.5□□□□□ -2.01
TRAFD1O14545 AP005435.4-201ENST00000529514 284 ntBASIC2.5□□□□□ -2.01
TRAFD1O14545 AC141273.1-201ENST00000565300 479 ntTSL 5 BASIC2.5□□□□□ -2.01
TRAFD1O14545 HMGN2P15-201ENST00000585707 270 ntBASIC2.5□□□□□ -2.01
TRAFD1O14545 LINC01533-205ENST00000593056 607 ntTSL 3 BASIC2.5□□□□□ -2.01
TRAFD1O14545 ZNF788-206ENST00000596883 692 ntTSL 3 BASIC2.5□□□□□ -2.01
TRAFD1O14545 AC023490.3-201ENST00000621762 358 ntTSL 3 BASIC2.5□□□□□ -2.01
TRAFD1O14545 AP000550.4-201ENST00000639507 358 ntTSL 3 BASIC2.5□□□□□ -2.01
TRAFD1O14545 SERPINI2-202ENST00000461846 1514 ntAPPRIS P1 TSL 1 (best) BASIC2.5□□□□□ -2.01
TRAFD1O14545 MYSM1-208ENST00000622766 6020 ntTSL 1 (best) BASIC2.5□□□□□ -2.01
TRAFD1O14545 AL354685.2-201ENST00000448218 1447 ntBASIC2.5□□□□□ -2.01
TRAFD1O14545 OR4M1-202ENST00000641200 3493 ntAPPRIS P1 BASIC2.49□□□□□ -2.01
TRAFD1O14545 MTND4P35-201ENST00000604257 1375 ntBASIC2.49□□□□□ -2.01
TRAFD1O14545 SACS-201ENST00000382292 15324 ntAPPRIS P1 TSL 5 BASIC2.49□□□□□ -2.01
TRAFD1O14545 Y_RNA.38-201ENST00000362617 102 ntBASIC2.49□□□□□ -2.01
TRAFD1O14545 RNU6-552P-201ENST00000362869 119 ntBASIC2.49□□□□□ -2.01
TRAFD1O14545 SNORD3E-201ENST00000362899 217 ntBASIC2.49□□□□□ -2.01
TRAFD1O14545 SNORA75B-201ENST00000384053 137 ntBASIC2.49□□□□□ -2.01
TRAFD1O14545 MIR181A1-201ENST00000385026 110 ntBASIC2.49□□□□□ -2.01
TRAFD1O14545 RNU6-903P-201ENST00000391270 109 ntBASIC2.49□□□□□ -2.01
TRAFD1O14545 AL359511.1-201ENST00000402970 211 ntBASIC2.49□□□□□ -2.01
TRAFD1O14545 AL513475.1-201ENST00000406602 315 ntBASIC2.49□□□□□ -2.01
TRAFD1O14545 RNU6-1068P-201ENST00000410958 103 ntBASIC2.49□□□□□ -2.01
TRAFD1O14545 AL109924.3-201ENST00000413324 393 ntTSL 2 BASIC2.49□□□□□ -2.01
TRAFD1O14545 AC004014.1-201ENST00000413406 538 ntTSL 4 BASIC2.49□□□□□ -2.01
TRAFD1O14545 AC062039.1-201ENST00000414394 565 ntTSL 2 BASIC2.49□□□□□ -2.01
TRAFD1O14545 MTCO1P20-201ENST00000425366 358 ntBASIC2.49□□□□□ -2.01
TRAFD1O14545 AC098614.2-201ENST00000426040 255 ntBASIC2.49□□□□□ -2.01
TRAFD1O14545 AF124730.1-201ENST00000430001 327 ntTSL 2 BASIC2.49□□□□□ -2.01
TRAFD1O14545 AC079799.1-201ENST00000430696 331 ntTSL 3 BASIC2.49□□□□□ -2.01
TRAFD1O14545 GTF2IP20-201ENST00000431663 360 ntBASIC2.49□□□□□ -2.01
TRAFD1O14545 AC012445.1-201ENST00000442831 607 ntTSL 3 BASIC2.49□□□□□ -2.01
TRAFD1O14545 AL513328.1-201ENST00000446460 224 ntBASIC2.49□□□□□ -2.01
TRAFD1O14545 AC073415.1-201ENST00000449240 153 ntBASIC2.49□□□□□ -2.01
TRAFD1O14545 AL356010.1-201ENST00000456364 102 ntBASIC2.49□□□□□ -2.01
TRAFD1O14545 LINC01038-201ENST00000457858 428 ntTSL 3 BASIC2.49□□□□□ -2.01
TRAFD1O14545 AL163973.1-201ENST00000484753 577 ntBASIC2.49□□□□□ -2.01
TRAFD1O14545 AC110767.1-201ENST00000508374 239 ntTSL 3 BASIC2.49□□□□□ -2.01
TRAFD1O14545 SMAD1-AS2-201ENST00000508936 1090 ntTSL 1 (best) BASIC2.49□□□□□ -2.01
TRAFD1O14545 AC113155.1-201ENST00000511141 769 ntBASIC2.49□□□□□ -2.01
TRAFD1O14545 AC011352.1-201ENST00000512300 793 ntBASIC2.49□□□□□ -2.01
TRAFD1O14545 SNORA40.12-201ENST00000516329 111 ntBASIC2.49□□□□□ -2.01
TRAFD1O14545 RNU6-1178P-201ENST00000516674 107 ntBASIC2.49□□□□□ -2.01
TRAFD1O14545 RNU6-1315P-201ENST00000517187 99 ntBASIC2.49□□□□□ -2.01
TRAFD1O14545 AC025755.1-201ENST00000521306 278 ntBASIC2.49□□□□□ -2.01
TRAFD1O14545 AC021698.1-201ENST00000524858 716 ntTSL 3 BASIC2.49□□□□□ -2.01
TRAFD1O14545 MTND1P35-201ENST00000526739 508 ntBASIC2.49□□□□□ -2.01
TRAFD1O14545 DEUP1-203ENST00000527307 767 ntTSL 3 BASIC2.49□□□□□ -2.01
Retrieved 100 of 98,524 protein–RNA pairs in 115.7 ms