Protein–RNA interactions for Protein: O00303

EIF3F, Eukaryotic translation initiation factor 3 subunit F, humanhuman

Predicted RBP Predictions only

Length 357 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
EIF3FO00303 MIR514A2-201ENST00000385131 88 ntBASIC3.06□□□□□ -1.92
EIF3FO00303 MIR514A3-201ENST00000385132 88 ntBASIC3.06□□□□□ -1.92
EIF3FO00303 KNL1-202ENST00000399668 7607 ntAPPRIS ALT2 TSL 1 (best) BASIC3.06□□□□□ -1.92
EIF3FO00303 RNA5SP120-201ENST00000410900 112 ntBASIC3.06□□□□□ -1.92
EIF3FO00303 RN7SKP58-201ENST00000411010 305 ntBASIC3.06□□□□□ -1.92
EIF3FO00303 RPLP0P7-201ENST00000416050 667 ntBASIC3.06□□□□□ -1.92
EIF3FO00303 AL096701.2-201ENST00000416920 238 ntBASIC3.06□□□□□ -1.92
EIF3FO00303 HMGB1P31-201ENST00000437242 427 ntBASIC3.06□□□□□ -1.92
EIF3FO00303 FABP5P14-201ENST00000437273 393 ntBASIC3.06□□□□□ -1.92
EIF3FO00303 AC098820.1-201ENST00000453157 512 ntTSL 2 BASIC3.06□□□□□ -1.92
EIF3FO00303 Y_RNA.654-201ENST00000497848 106 ntBASIC3.06□□□□□ -1.92
EIF3FO00303 HIGD1AP13-201ENST00000509878 289 ntBASIC3.06□□□□□ -1.92
EIF3FO00303 RNU6-189P-201ENST00000516120 101 ntBASIC3.06□□□□□ -1.92
EIF3FO00303 RNA5SP76-201ENST00000516277 87 ntBASIC3.06□□□□□ -1.92
EIF3FO00303 AC109479.2-201ENST00000517842 174 ntBASIC3.06□□□□□ -1.92
EIF3FO00303 AC023050.3-201ENST00000541142 333 ntBASIC3.06□□□□□ -1.92
EIF3FO00303 AC091534.1-202ENST00000549953 468 ntTSL 5 BASIC3.06□□□□□ -1.92
EIF3FO00303 LINC02328-203ENST00000557195 682 ntTSL 3 BASIC3.06□□□□□ -1.92
EIF3FO00303 UBE2Q2P8-201ENST00000560644 102 ntBASIC3.06□□□□□ -1.92
EIF3FO00303 AC141273.1-201ENST00000565300 479 ntTSL 5 BASIC3.06□□□□□ -1.92
EIF3FO00303 MIR5004-201ENST00000579078 107 ntBASIC3.06□□□□□ -1.92
EIF3FO00303 AC012493.2-201ENST00000595083 291 ntBASIC3.06□□□□□ -1.92
EIF3FO00303 AC002044.1-201ENST00000606707 158 ntBASIC3.06□□□□□ -1.92
EIF3FO00303 AC018692.3-201ENST00000623929 123 ntBASIC3.06□□□□□ -1.92
EIF3FO00303 TMEM59-205ENST00000371348 1911 ntTSL 1 (best) BASIC3.05□□□□□ -1.92
EIF3FO00303 SLCO1B3-201ENST00000261196 2840 ntAPPRIS P1 TSL 1 (best) BASIC3.05□□□□□ -1.92
EIF3FO00303 RNU6-78P-201ENST00000362897 107 ntBASIC3.05□□□□□ -1.92
EIF3FO00303 RNU6-1180P-201ENST00000364935 107 ntBASIC3.05□□□□□ -1.92
EIF3FO00303 RNU4-12P-201ENST00000365233 139 ntBASIC3.05□□□□□ -1.92
EIF3FO00303 SET-203ENST00000372688 801 ntTSL 2 BASIC3.05□□□□□ -1.92
EIF3FO00303 SNORD116-20-201ENST00000384529 92 ntBASIC3.05□□□□□ -1.92
EIF3FO00303 SNORA46-201ENST00000384762 135 ntBASIC3.05□□□□□ -1.92
EIF3FO00303 RNA5SP219-201ENST00000390940 113 ntBASIC3.05□□□□□ -1.92
EIF3FO00303 FO393413.1-201ENST00000402892 195 ntBASIC3.05□□□□□ -1.92
EIF3FO00303 RNU6-1068P-201ENST00000410958 103 ntBASIC3.05□□□□□ -1.92
EIF3FO00303 POLHP1-201ENST00000411806 470 ntBASIC3.05□□□□□ -1.92
EIF3FO00303 FCF1P9-201ENST00000412546 282 ntBASIC3.05□□□□□ -1.92
EIF3FO00303 SNRPEP10-201ENST00000420249 274 ntBASIC3.05□□□□□ -1.92
EIF3FO00303 AP001117.1-201ENST00000428205 609 ntTSL 2 BASIC3.05□□□□□ -1.92
EIF3FO00303 ZFY-AS1-202ENST00000431145 419 ntTSL 3 BASIC3.05□□□□□ -1.92
EIF3FO00303 UBBP3-201ENST00000445497 241 ntBASIC3.05□□□□□ -1.92
EIF3FO00303 LINC01201-202ENST00000451431 401 ntTSL 3 BASIC3.05□□□□□ -1.92
EIF3FO00303 MTND3P16-201ENST00000452205 344 ntBASIC3.05□□□□□ -1.92
EIF3FO00303 TSPY5P-202ENST00000456541 142 ntTSL 3 BASIC3.05□□□□□ -1.92
EIF3FO00303 RPL21P99-201ENST00000480369 423 ntBASIC3.05□□□□□ -1.92
EIF3FO00303 RPL23AP70-201ENST00000483361 460 ntBASIC3.05□□□□□ -1.92
EIF3FO00303 MDM2-221ENST00000517852 393 ntTSL 1 (best) BASIC3.05□□□□□ -1.92
EIF3FO00303 OOSP2-203ENST00000532905 496 ntAPPRIS ALT2 TSL 3 BASIC3.05□□□□□ -1.92
EIF3FO00303 LINC01195-201ENST00000570118 451 ntTSL 3 BASIC3.05□□□□□ -1.92
EIF3FO00303 ATG5-207ENST00000613993 733 ntTSL 1 (best) BASIC3.05□□□□□ -1.92
EIF3FO00303 AC090517.2-201ENST00000614966 680 ntBASIC3.05□□□□□ -1.92
EIF3FO00303 DLEU1_1.1-201ENST00000618107 190 ntBASIC3.05□□□□□ -1.92
EIF3FO00303 AC103705.1-201ENST00000619013 241 ntBASIC3.05□□□□□ -1.92
EIF3FO00303 SMIM2-AS1-204ENST00000619472 746 ntTSL 3 BASIC3.05□□□□□ -1.92
EIF3FO00303 NANOGNB-202ENST00000640040 824 ntAPPRIS ALT2 TSL 5 BASIC3.05□□□□□ -1.92
EIF3FO00303 AC027514.1-201ENST00000588561 1603 ntBASIC3.04□□□□□ -1.92
EIF3FO00303 OR4G1P-203ENST00000641984 1631 ntBASIC3.04□□□□□ -1.92
EIF3FO00303 TSLP-202ENST00000379706 2411 ntTSL 1 (best) BASIC3.04□□□□□ -1.92
EIF3FO00303 CHD9-203ENST00000447540 11509 ntTSL 5 BASIC3.04□□□□□ -1.92
EIF3FO00303 JMJD1C-210ENST00000542921 8149 ntAPPRIS ALT2 TSL 1 (best) BASIC3.04□□□□□ -1.92
EIF3FO00303 LIG4-203ENST00000442234 3982 ntAPPRIS P1 TSL 1 (best) BASIC3.04□□□□□ -1.92
EIF3FO00303 RNA5SP387-201ENST00000364226 106 ntBASIC3.04□□□□□ -1.92
EIF3FO00303 Y_RNA.231-201ENST00000364358 102 ntBASIC3.04□□□□□ -1.92
EIF3FO00303 RNU4-20P-201ENST00000365601 151 ntBASIC3.04□□□□□ -1.92
EIF3FO00303 DEFB119-202ENST00000376315 324 ntAPPRIS ALT2 TSL 1 (best) BASIC3.04□□□□□ -1.92
EIF3FO00303 RNA5SP274-201ENST00000410484 108 ntBASIC3.04□□□□□ -1.92
EIF3FO00303 AL513008.1-201ENST00000412701 161 ntTSL 5 BASIC3.04□□□□□ -1.92
EIF3FO00303 AC004014.1-201ENST00000413406 538 ntTSL 4 BASIC3.04□□□□□ -1.92
EIF3FO00303 AC012370.1-201ENST00000419244 530 ntTSL 3 BASIC3.04□□□□□ -1.92
EIF3FO00303 AC092427.1-202ENST00000430569 476 ntBASIC3.04□□□□□ -1.92
EIF3FO00303 AL359706.1-201ENST00000437748 315 ntTSL 3 BASIC3.04□□□□□ -1.92
EIF3FO00303 MCHR2-AS1-203ENST00000451220 429 ntTSL 3 BASIC3.04□□□□□ -1.92
EIF3FO00303 UQCRHP3-201ENST00000451503 251 ntBASIC3.04□□□□□ -1.92
EIF3FO00303 AL121769.1-201ENST00000469473 401 ntBASIC3.04□□□□□ -1.92
EIF3FO00303 AC018437.1-201ENST00000492214 406 ntBASIC3.04□□□□□ -1.92
EIF3FO00303 TRIQK-207ENST00000519069 598 ntTSL 4 BASIC3.04□□□□□ -1.92
EIF3FO00303 AC103853.2-201ENST00000519805 716 ntTSL 3 BASIC3.04□□□□□ -1.92
EIF3FO00303 TTN-AS1-243ENST00000591867 748 ntTSL 5 BASIC3.04□□□□□ -1.92
EIF3FO00303 VN1R80P-201ENST00000597126 338 ntBASIC3.04□□□□□ -1.92
EIF3FO00303 AC130469.1-201ENST00000597256 388 ntTSL 5 BASIC3.04□□□□□ -1.92
EIF3FO00303 MIR7112-201ENST00000616126 65 ntBASIC3.04□□□□□ -1.92
EIF3FO00303 AC244517.12-201ENST00000623581 663 ntBASIC3.04□□□□□ -1.92
EIF3FO00303 CUL3-204ENST00000409777 3147 ntTSL 1 (best) BASIC3.04□□□□□ -1.92
EIF3FO00303 KIAA0825-203ENST00000513200 4942 ntTSL 5 BASIC3.04□□□□□ -1.92
EIF3FO00303 OFD1P6Y-202ENST00000451061 2724 ntBASIC3.04□□□□□ -1.92
EIF3FO00303 SPAM1-206ENST00000460182 2154 ntAPPRIS ALT2 TSL 1 (best) BASIC3.04□□□□□ -1.92
EIF3FO00303 MUM1L1-203ENST00000372552 3957 ntAPPRIS P1 TSL 5 BASIC3.03□□□□□ -1.92
EIF3FO00303 GPBP1-201ENST00000264779 1786 ntAPPRIS ALT2 TSL 1 (best) BASIC3.03□□□□□ -1.92
EIF3FO00303 GRAMD1C-202ENST00000440446 3475 ntTSL 1 (best) BASIC3.03□□□□□ -1.92
EIF3FO00303 RNU6-1090P-201ENST00000364065 94 ntBASIC3.03□□□□□ -1.92
EIF3FO00303 Y_RNA.333-201ENST00000365274 102 ntBASIC3.03□□□□□ -1.92
EIF3FO00303 SNORA9-201ENST00000384215 133 ntBASIC3.03□□□□□ -1.92
EIF3FO00303 SNORA11.1-201ENST00000408133 129 ntBASIC3.03□□□□□ -1.92
EIF3FO00303 RNU6-1328P-201ENST00000410938 106 ntBASIC3.03□□□□□ -1.92
EIF3FO00303 RNU2-25P-201ENST00000411041 191 ntBASIC3.03□□□□□ -1.92
EIF3FO00303 AC245054.2-201ENST00000415639 319 ntBASIC3.03□□□□□ -1.92
EIF3FO00303 AL359195.1-201ENST00000416657 339 ntTSL 3 BASIC3.03□□□□□ -1.92
EIF3FO00303 AL138962.1-201ENST00000417987 411 ntTSL 5 BASIC3.03□□□□□ -1.92
EIF3FO00303 Z98742.2-201ENST00000431564 187 ntBASIC3.03□□□□□ -1.92
EIF3FO00303 ERLEC1P1-201ENST00000433806 578 ntBASIC3.03□□□□□ -1.92
Retrieved 100 of 98,524 protein–RNA pairs in 96.5 ms