Protein–RNA interactions for Protein: A0A0B4J248

TRAV1-1, T-cell receptor alpha variable 1-1 (Fragment), humanhuman

Predictions only

Length 108 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRAV1-1A0A0B4J248 RNU6-777P-201ENST00000364265 104 ntBASIC0.95□□□□□ -2.26
TRAV1-1A0A0B4J248 SNORD14B-201ENST00000364533 90 ntBASIC0.95□□□□□ -2.26
TRAV1-1A0A0B4J248 RNU6-621P-201ENST00000364752 109 ntBASIC0.95□□□□□ -2.26
TRAV1-1A0A0B4J248 SNORD14D-201ENST00000384390 87 ntBASIC0.95□□□□□ -2.26
TRAV1-1A0A0B4J248 RNA5SP100-201ENST00000410903 110 ntBASIC0.95□□□□□ -2.26
TRAV1-1A0A0B4J248 RNA5SP59-201ENST00000410922 110 ntBASIC0.95□□□□□ -2.26
TRAV1-1A0A0B4J248 SRIP3-201ENST00000413200 219 ntBASIC0.95□□□□□ -2.26
TRAV1-1A0A0B4J248 AP000432.1-201ENST00000416641 516 ntTSL 3 BASIC0.95□□□□□ -2.26
TRAV1-1A0A0B4J248 AC016710.1-201ENST00000421326 466 ntTSL 3 BASIC0.95□□□□□ -2.26
TRAV1-1A0A0B4J248 MRPL35P3-201ENST00000421557 364 ntBASIC0.95□□□□□ -2.26
TRAV1-1A0A0B4J248 LINC00397-201ENST00000422074 344 ntTSL 3 BASIC0.95□□□□□ -2.26
TRAV1-1A0A0B4J248 AC244035.3-201ENST00000428399 271 ntTSL 2 BASIC0.95□□□□□ -2.26
TRAV1-1A0A0B4J248 AC009158.1-207ENST00000432973 394 ntTSL 5 BASIC0.95□□□□□ -2.26
TRAV1-1A0A0B4J248 AC092839.1-201ENST00000433475 536 ntTSL 4 BASIC0.95□□□□□ -2.26
TRAV1-1A0A0B4J248 AC092473.1-201ENST00000441098 221 ntBASIC0.95□□□□□ -2.26
TRAV1-1A0A0B4J248 AP000542.1-201ENST00000448473 371 ntBASIC0.95□□□□□ -2.26
TRAV1-1A0A0B4J248 AC079448.1-201ENST00000449377 373 ntBASIC0.95□□□□□ -2.26
TRAV1-1A0A0B4J248 GJE1-201ENST00000450456 916 ntAPPRIS P1 TSL 5 BASIC0.95□□□□□ -2.26
TRAV1-1A0A0B4J248 AC013269.3-201ENST00000450486 444 ntTSL 3 BASIC0.95□□□□□ -2.26
TRAV1-1A0A0B4J248 SNORD97-201ENST00000459187 142 ntBASIC0.95□□□□□ -2.26
TRAV1-1A0A0B4J248 Y_RNA.638-201ENST00000459374 113 ntBASIC0.95□□□□□ -2.26
TRAV1-1A0A0B4J248 MEMO1P3-201ENST00000459811 302 ntBASIC0.95□□□□□ -2.26
TRAV1-1A0A0B4J248 AC093895.1-203ENST00000506814 591 ntTSL 5 BASIC0.95□□□□□ -2.26
TRAV1-1A0A0B4J248 PTP4A1P4-201ENST00000512479 322 ntBASIC0.95□□□□□ -2.26
TRAV1-1A0A0B4J248 RNU6-572P-201ENST00000516724 80 ntBASIC0.95□□□□□ -2.26
TRAV1-1A0A0B4J248 5S_rRNA.3-201ENST00000517021 110 ntBASIC0.95□□□□□ -2.26
TRAV1-1A0A0B4J248 AC135279.1-201ENST00000543493 504 ntBASIC0.95□□□□□ -2.26
TRAV1-1A0A0B4J248 AC011611.2-201ENST00000549888 358 ntTSL 3 BASIC0.95□□□□□ -2.26
TRAV1-1A0A0B4J248 AL442163.1-201ENST00000557251 515 ntTSL 5 BASIC0.95□□□□□ -2.26
TRAV1-1A0A0B4J248 AC015720.1-201ENST00000565251 277 ntBASIC0.95□□□□□ -2.26
TRAV1-1A0A0B4J248 AC093249.1-201ENST00000567049 203 ntBASIC0.95□□□□□ -2.26
TRAV1-1A0A0B4J248 AC103987.3-201ENST00000582071 292 ntBASIC0.95□□□□□ -2.26
TRAV1-1A0A0B4J248 AP001981.2-201ENST00000603241 418 ntBASIC0.95□□□□□ -2.26
TRAV1-1A0A0B4J248 BNIP3P10-201ENST00000605360 577 ntBASIC0.95□□□□□ -2.26
TRAV1-1A0A0B4J248 5S_rRNA.19-201ENST00000612131 110 ntBASIC0.95□□□□□ -2.26
TRAV1-1A0A0B4J248 AL512506.1-201ENST00000613918 449 ntBASIC0.95□□□□□ -2.26
TRAV1-1A0A0B4J248 5S_rRNA.18-201ENST00000621941 110 ntBASIC0.95□□□□□ -2.26
TRAV1-1A0A0B4J248 FARSBP1-201ENST00000435808 1778 ntBASIC0.95□□□□□ -2.26
TRAV1-1A0A0B4J248 SLC25A46-206ENST00000509432 1596 ntTSL 2 BASIC0.95□□□□□ -2.26
TRAV1-1A0A0B4J248 ZNF518A-210ENST00000624776 7994 ntAPPRIS P1 TSL 1 (best) BASIC0.95□□□□□ -2.26
TRAV1-1A0A0B4J248 LINC00643-201ENST00000334389 3247 ntTSL 2 BASIC0.94□□□□□ -2.26
TRAV1-1A0A0B4J248 AC111000.4-202ENST00000505646 2648 ntTSL 2 BASIC0.94□□□□□ -2.26
TRAV1-1A0A0B4J248 RNU6-661P-201ENST00000362409 107 ntBASIC0.94□□□□□ -2.26
TRAV1-1A0A0B4J248 RNU6-853P-201ENST00000364306 107 ntBASIC0.94□□□□□ -2.26
TRAV1-1A0A0B4J248 MIR597-201ENST00000384968 97 ntBASIC0.94□□□□□ -2.26
TRAV1-1A0A0B4J248 MIR186-201ENST00000384988 86 ntBASIC0.94□□□□□ -2.26
TRAV1-1A0A0B4J248 SNORA48.1-201ENST00000390879 135 ntBASIC0.94□□□□□ -2.26
TRAV1-1A0A0B4J248 RNU1-78P-201ENST00000391248 165 ntBASIC0.94□□□□□ -2.26
TRAV1-1A0A0B4J248 ZNF468-202ENST00000396409 384 ntTSL 5 BASIC0.94□□□□□ -2.26
TRAV1-1A0A0B4J248 RNU2-32P-201ENST00000411193 191 ntBASIC0.94□□□□□ -2.26
TRAV1-1A0A0B4J248 RPL23AP36-201ENST00000413895 458 ntBASIC0.94□□□□□ -2.26
TRAV1-1A0A0B4J248 MTND4P3-201ENST00000417829 541 ntBASIC0.94□□□□□ -2.26
TRAV1-1A0A0B4J248 AL158013.1-202ENST00000419666 520 ntTSL 5 BASIC0.94□□□□□ -2.26
TRAV1-1A0A0B4J248 AL592045.1-201ENST00000429867 352 ntBASIC0.94□□□□□ -2.26
TRAV1-1A0A0B4J248 AL359771.1-201ENST00000441809 379 ntTSL 5 BASIC0.94□□□□□ -2.26
TRAV1-1A0A0B4J248 MTCO2P25-201ENST00000447065 681 ntBASIC0.94□□□□□ -2.26
TRAV1-1A0A0B4J248 BTF3P15-201ENST00000455606 336 ntBASIC0.94□□□□□ -2.26
TRAV1-1A0A0B4J248 RPS3AP22-201ENST00000488297 769 ntBASIC0.94□□□□□ -2.26
TRAV1-1A0A0B4J248 AC079943.2-201ENST00000488999 716 ntTSL 3 BASIC0.94□□□□□ -2.26
TRAV1-1A0A0B4J248 AC106821.1-201ENST00000502861 572 ntTSL 5 BASIC0.94□□□□□ -2.26
TRAV1-1A0A0B4J248 EPGN-208ENST00000509145 222 ntTSL 1 (best) BASIC0.94□□□□□ -2.26
TRAV1-1A0A0B4J248 RNU2-53P-201ENST00000516257 147 ntBASIC0.94□□□□□ -2.26
TRAV1-1A0A0B4J248 CCDC7-207ENST00000535327 700 ntAPPRIS ALT2 TSL 1 (best) BASIC0.94□□□□□ -2.26
TRAV1-1A0A0B4J248 AC010183.2-202ENST00000546791 382 ntTSL 3 BASIC0.94□□□□□ -2.26
TRAV1-1A0A0B4J248 RRN3P3-201ENST00000549207 578 ntBASIC0.94□□□□□ -2.26
TRAV1-1A0A0B4J248 AC012146.1-204ENST00000570712 426 ntTSL 3 BASIC0.94□□□□□ -2.26
TRAV1-1A0A0B4J248 AP001496.1-201ENST00000579113 471 ntTSL 4 BASIC0.94□□□□□ -2.26
TRAV1-1A0A0B4J248 BNIP3P27-201ENST00000599991 412 ntBASIC0.94□□□□□ -2.26
TRAV1-1A0A0B4J248 AP001485.1-201ENST00000604799 199 ntBASIC0.94□□□□□ -2.26
TRAV1-1A0A0B4J248 AC103810.9-201ENST00000606688 112 ntBASIC0.94□□□□□ -2.26
TRAV1-1A0A0B4J248 AL133445.2-201ENST00000611191 527 ntBASIC0.94□□□□□ -2.26
TRAV1-1A0A0B4J248 DSCR8-208ENST00000614538 403 ntAPPRIS P5 TSL 5 BASIC0.94□□□□□ -2.26
TRAV1-1A0A0B4J248 AL158163.2-201ENST00000619110 700 ntBASIC0.94□□□□□ -2.26
TRAV1-1A0A0B4J248 AC112204.3-201ENST00000623822 332 ntBASIC0.94□□□□□ -2.26
TRAV1-1A0A0B4J248 AP000560.1-201ENST00000624150 1937 ntBASIC0.93□□□□□ -2.26
TRAV1-1A0A0B4J248 SNORD115-3-201ENST00000363100 82 ntBASIC0.93□□□□□ -2.26
TRAV1-1A0A0B4J248 RNU6-529P-201ENST00000363383 104 ntBASIC0.93□□□□□ -2.26
TRAV1-1A0A0B4J248 RNU6-546P-201ENST00000383991 107 ntBASIC0.93□□□□□ -2.26
TRAV1-1A0A0B4J248 RNU6-166P-201ENST00000384371 107 ntBASIC0.93□□□□□ -2.26
TRAV1-1A0A0B4J248 RNU6-843P-201ENST00000384454 104 ntBASIC0.93□□□□□ -2.26
TRAV1-1A0A0B4J248 RNU6-1274P-201ENST00000384557 107 ntBASIC0.93□□□□□ -2.26
TRAV1-1A0A0B4J248 Y_RNA.534-201ENST00000384599 112 ntBASIC0.93□□□□□ -2.26
TRAV1-1A0A0B4J248 RNU6-939P-201ENST00000384634 107 ntBASIC0.93□□□□□ -2.26
TRAV1-1A0A0B4J248 TRDJ1-201ENST00000390473 51 ntAPPRIS P1 BASIC0.93□□□□□ -2.26
TRAV1-1A0A0B4J248 RNU6-817P-201ENST00000391083 104 ntBASIC0.93□□□□□ -2.26
TRAV1-1A0A0B4J248 CXADR-203ENST00000400165 603 ntTSL 1 (best) BASIC0.93□□□□□ -2.26
TRAV1-1A0A0B4J248 CoTC_ribozyme.1-201ENST00000408104 192 ntBASIC0.93□□□□□ -2.26
TRAV1-1A0A0B4J248 RNU2-36P-201ENST00000410361 191 ntBASIC0.93□□□□□ -2.26
TRAV1-1A0A0B4J248 AL138737.1-202ENST00000418834 876 ntTSL 3 BASIC0.93□□□□□ -2.26
TRAV1-1A0A0B4J248 USP9YP18-201ENST00000425912 695 ntBASIC0.93□□□□□ -2.26
TRAV1-1A0A0B4J248 AC108667.1-201ENST00000428618 249 ntBASIC0.93□□□□□ -2.26
TRAV1-1A0A0B4J248 AC093019.2-201ENST00000432294 384 ntTSL 3 BASIC0.93□□□□□ -2.26
TRAV1-1A0A0B4J248 MTCO2P20-201ENST00000437339 673 ntBASIC0.93□□□□□ -2.26
TRAV1-1A0A0B4J248 EEF1E1P1-201ENST00000446998 430 ntBASIC0.93□□□□□ -2.26
TRAV1-1A0A0B4J248 RNA5SP57-201ENST00000459463 123 ntBASIC0.93□□□□□ -2.26
TRAV1-1A0A0B4J248 AC004223.1-201ENST00000479840 271 ntBASIC0.93□□□□□ -2.26
TRAV1-1A0A0B4J248 AC008837.2-201ENST00000513076 418 ntBASIC0.93□□□□□ -2.26
TRAV1-1A0A0B4J248 SNORA31.19-201ENST00000517079 126 ntBASIC0.93□□□□□ -2.26
TRAV1-1A0A0B4J248 AP003392.2-201ENST00000527269 208 ntBASIC0.93□□□□□ -2.26
TRAV1-1A0A0B4J248 AC087441.2-201ENST00000529141 262 ntBASIC0.93□□□□□ -2.26
Retrieved 100 of 98,524 protein–RNA pairs in 105.3 ms