Protein–RNA interactions for Protein: Q9Y5F2

PCDHB11, Protocadherin beta-11, humanhuman

Predictions only

Length 797 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHB11Q9Y5F2 GPATCH2L-214ENST00000621494 12396 ntAPPRIS P1 TSL 2 BASIC4.73□□□□□ -1.65
PCDHB11Q9Y5F2 WDR7-201ENST00000254442 14083 ntAPPRIS P1 TSL 1 (best) BASIC4.73□□□□□ -1.65
PCDHB11Q9Y5F2 DCN-201ENST00000052754 7156 ntAPPRIS P1 TSL 1 (best) BASIC4.73□□□□□ -1.65
PCDHB11Q9Y5F2 TAX1BP1-202ENST00000396319 2892 ntAPPRIS P3 TSL 1 (best) BASIC4.73□□□□□ -1.65
PCDHB11Q9Y5F2 EYA1-203ENST00000388740 3788 ntTSL 5 BASIC4.73□□□□□ -1.65
PCDHB11Q9Y5F2 Y_RNA.75-201ENST00000362927 97 ntBASIC4.73□□□□□ -1.65
PCDHB11Q9Y5F2 Y_RNA.121-201ENST00000363309 113 ntBASIC4.73□□□□□ -1.65
PCDHB11Q9Y5F2 RNU4-84P-201ENST00000364200 139 ntBASIC4.73□□□□□ -1.65
PCDHB11Q9Y5F2 SNORA26.3-201ENST00000391119 136 ntBASIC4.73□□□□□ -1.65
PCDHB11Q9Y5F2 Y_RNA.586-201ENST00000391146 98 ntBASIC4.73□□□□□ -1.65
PCDHB11Q9Y5F2 MIR888-201ENST00000401186 77 ntBASIC4.73□□□□□ -1.65
PCDHB11Q9Y5F2 RAB28P5-201ENST00000427490 651 ntBASIC4.73□□□□□ -1.65
PCDHB11Q9Y5F2 FTH1P6-201ENST00000430768 320 ntBASIC4.73□□□□□ -1.65
PCDHB11Q9Y5F2 AL162386.2-201ENST00000442428 457 ntTSL 3 BASIC4.73□□□□□ -1.65
PCDHB11Q9Y5F2 HMGB3P8-201ENST00000449709 577 ntBASIC4.73□□□□□ -1.65
PCDHB11Q9Y5F2 AL121594.1-201ENST00000475906 575 ntBASIC4.73□□□□□ -1.65
PCDHB11Q9Y5F2 AC209154.1-201ENST00000582156 337 ntBASIC4.73□□□□□ -1.65
PCDHB11Q9Y5F2 AC023043.4-201ENST00000612081 449 ntBASIC4.73□□□□□ -1.65
PCDHB11Q9Y5F2 CR381572.2-201ENST00000624852 397 ntBASIC4.73□□□□□ -1.65
PCDHB11Q9Y5F2 AL109837.2-201ENST00000632608 295 ntTSL 3 BASIC4.73□□□□□ -1.65
PCDHB11Q9Y5F2 CDH9-201ENST00000231021 3079 ntAPPRIS P1 TSL 1 (best) BASIC4.73□□□□□ -1.65
PCDHB11Q9Y5F2 RAP1B-201ENST00000250559 13438 ntAPPRIS P1 TSL 1 (best) BASIC4.73□□□□□ -1.65
PCDHB11Q9Y5F2 PP2D1-202ENST00000389050 2151 ntAPPRIS P1 TSL 5 BASIC4.72□□□□□ -1.65
PCDHB11Q9Y5F2 BMPR2-201ENST00000374574 9683 ntTSL 2 BASIC4.72□□□□□ -1.65
PCDHB11Q9Y5F2 PLAG1-201ENST00000316981 7322 ntAPPRIS P1 TSL 1 (best) BASIC4.72□□□□□ -1.65
PCDHB11Q9Y5F2 ARHGEF12-202ENST00000397843 9660 ntAPPRIS P1 TSL 1 (best) BASIC4.72□□□□□ -1.65
PCDHB11Q9Y5F2 AC006148.1-201ENST00000484322 4310 ntTSL 1 (best) BASIC4.72□□□□□ -1.65
PCDHB11Q9Y5F2 ADGRL2-205ENST00000370717 5873 ntAPPRIS ALT2 TSL 5 BASIC4.72□□□□□ -1.65
PCDHB11Q9Y5F2 SLC1A3-202ENST00000381918 3652 ntTSL 1 (best) BASIC4.72□□□□□ -1.65
PCDHB11Q9Y5F2 ADGRL2-204ENST00000370715 5585 ntTSL 1 (best) BASIC4.72□□□□□ -1.65
PCDHB11Q9Y5F2 PDE10A-201ENST00000366882 8233 ntAPPRIS P3 TSL 5 BASIC4.72□□□□□ -1.65
PCDHB11Q9Y5F2 GAGE12B-201ENST00000361446 117 ntAPPRIS P1 BASIC4.72□□□□□ -1.65
PCDHB11Q9Y5F2 Y_RNA.179-201ENST00000363844 90 ntBASIC4.72□□□□□ -1.65
PCDHB11Q9Y5F2 Y_RNA.412-201ENST00000384001 104 ntBASIC4.72□□□□□ -1.65
PCDHB11Q9Y5F2 AL357515.1-201ENST00000402967 542 ntBASIC4.72□□□□□ -1.65
PCDHB11Q9Y5F2 RNU2-2P-201ENST00000410396 191 ntBASIC4.72□□□□□ -1.65
PCDHB11Q9Y5F2 RNU6-1199P-201ENST00000411249 104 ntBASIC4.72□□□□□ -1.65
PCDHB11Q9Y5F2 RPS20P14-201ENST00000412545 360 ntBASIC4.72□□□□□ -1.65
PCDHB11Q9Y5F2 RPL36AP10-201ENST00000421785 322 ntBASIC4.72□□□□□ -1.65
PCDHB11Q9Y5F2 BTF3P11-201ENST00000426582 477 ntBASIC4.72□□□□□ -1.65
PCDHB11Q9Y5F2 AC097662.1-205ENST00000433324 241 ntTSL 5 BASIC4.72□□□□□ -1.65
PCDHB11Q9Y5F2 RPS15AP5-201ENST00000436276 388 ntBASIC4.72□□□□□ -1.65
PCDHB11Q9Y5F2 AC244670.1-201ENST00000436879 112 ntBASIC4.72□□□□□ -1.65
PCDHB11Q9Y5F2 AC000111.2-201ENST00000448200 210 ntBASIC4.72□□□□□ -1.65
PCDHB11Q9Y5F2 RPS27AP9-201ENST00000477681 438 ntBASIC4.72□□□□□ -1.65
PCDHB11Q9Y5F2 IGLV2-34-201ENST00000490007 283 ntBASIC4.72□□□□□ -1.65
PCDHB11Q9Y5F2 RNU5F-8P-201ENST00000515941 111 ntBASIC4.72□□□□□ -1.65
PCDHB11Q9Y5F2 SNORA74C-1-201ENST00000580726 201 ntBASIC4.72□□□□□ -1.65
PCDHB11Q9Y5F2 MIR5096-201ENST00000583713 70 ntBASIC4.72□□□□□ -1.65
PCDHB11Q9Y5F2 RNU2-4P-201ENST00000606190 192 ntBASIC4.72□□□□□ -1.65
PCDHB11Q9Y5F2 U2.15-201ENST00000611544 191 ntBASIC4.72□□□□□ -1.65
PCDHB11Q9Y5F2 U2.16-201ENST00000613119 191 ntBASIC4.72□□□□□ -1.65
PCDHB11Q9Y5F2 U2.12-201ENST00000613778 191 ntBASIC4.72□□□□□ -1.65
PCDHB11Q9Y5F2 AL365222.1-201ENST00000614661 98 ntBASIC4.72□□□□□ -1.65
PCDHB11Q9Y5F2 U2.9-201ENST00000615427 191 ntBASIC4.72□□□□□ -1.65
PCDHB11Q9Y5F2 AC004467.1-201ENST00000615678 330 ntBASIC4.72□□□□□ -1.65
PCDHB11Q9Y5F2 U2.11-201ENST00000616345 191 ntBASIC4.72□□□□□ -1.65
PCDHB11Q9Y5F2 U2.2-201ENST00000616535 191 ntBASIC4.72□□□□□ -1.65
PCDHB11Q9Y5F2 U2.3-201ENST00000617785 191 ntBASIC4.72□□□□□ -1.65
PCDHB11Q9Y5F2 U2.19-201ENST00000618602 191 ntBASIC4.72□□□□□ -1.65
PCDHB11Q9Y5F2 RNU2-1-201ENST00000618664 191 ntBASIC4.72□□□□□ -1.65
PCDHB11Q9Y5F2 MUCL1-205ENST00000619042 243 ntAPPRIS ALT2 TSL 5 BASIC4.72□□□□□ -1.65
PCDHB11Q9Y5F2 U2.6-201ENST00000619225 191 ntBASIC4.72□□□□□ -1.65
PCDHB11Q9Y5F2 U2.5-201ENST00000619465 191 ntBASIC4.72□□□□□ -1.65
PCDHB11Q9Y5F2 U2.10-201ENST00000620268 191 ntBASIC4.72□□□□□ -1.65
PCDHB11Q9Y5F2 ZNF780B-202ENST00000434248 8665 ntAPPRIS P1 TSL 5 BASIC4.72□□□□□ -1.65
PCDHB11Q9Y5F2 ZNF780B-207ENST00000617676 8664 ntAPPRIS P1 TSL 5 BASIC4.72□□□□□ -1.65
PCDHB11Q9Y5F2 ARHGAP28-202ENST00000314319 5415 ntAPPRIS P2 TSL 5 BASIC4.72□□□□□ -1.65
PCDHB11Q9Y5F2 RPS6KA6-204ENST00000620340 8169 ntTSL 5 BASIC4.72□□□□□ -1.65
PCDHB11Q9Y5F2 TMEM106B-201ENST00000396667 12539 ntAPPRIS P1 TSL 1 (best) BASIC4.72□□□□□ -1.65
PCDHB11Q9Y5F2 CRISP3-204ENST00000433368 2205 ntAPPRIS ALT2 TSL 5 BASIC4.72□□□□□ -1.65
PCDHB11Q9Y5F2 ZBTB38-201ENST00000321464 3588 ntAPPRIS P1 BASIC4.71□□□□□ -1.65
PCDHB11Q9Y5F2 EPHA7-202ENST00000369303 6588 ntAPPRIS P1 TSL 1 (best) BASIC4.71□□□□□ -1.65
PCDHB11Q9Y5F2 SLC30A6-203ENST00000379343 2354 ntTSL 1 (best) BASIC4.71□□□□□ -1.65
PCDHB11Q9Y5F2 VPS13D-213ENST00000613099 16245 ntAPPRIS ALT1 TSL 1 (best) BASIC4.71□□□□□ -1.65
PCDHB11Q9Y5F2 PCDH15-209ENST00000395433 6942 ntTSL 5 BASIC4.71□□□□□ -1.65
PCDHB11Q9Y5F2 ZFHX4-207ENST00000521891 14019 ntAPPRIS P2 TSL 5 BASIC4.71□□□□□ -1.66
PCDHB11Q9Y5F2 DICER1-212ENST00000541352 5621 ntTSL 1 (best) BASIC4.71□□□□□ -1.66
PCDHB11Q9Y5F2 DLEU2_6.3-201ENST00000340052 136 ntBASIC4.71□□□□□ -1.66
PCDHB11Q9Y5F2 RNU6-1285P-201ENST00000363480 105 ntBASIC4.71□□□□□ -1.66
PCDHB11Q9Y5F2 RNU6-884P-201ENST00000363889 107 ntBASIC4.71□□□□□ -1.66
PCDHB11Q9Y5F2 RN7SKP280-201ENST00000364196 304 ntBASIC4.71□□□□□ -1.66
PCDHB11Q9Y5F2 Y_RNA.357-201ENST00000365487 109 ntBASIC4.71□□□□□ -1.66
PCDHB11Q9Y5F2 RNU4-17P-201ENST00000365598 141 ntBASIC4.71□□□□□ -1.66
PCDHB11Q9Y5F2 Y_RNA.498-201ENST00000384460 102 ntBASIC4.71□□□□□ -1.66
PCDHB11Q9Y5F2 MIR186-201ENST00000384988 86 ntBASIC4.71□□□□□ -1.66
PCDHB11Q9Y5F2 RNU6-1248P-201ENST00000391096 64 ntBASIC4.71□□□□□ -1.66
PCDHB11Q9Y5F2 PPIAP31-201ENST00000405422 495 ntBASIC4.71□□□□□ -1.66
PCDHB11Q9Y5F2 RN7SKP100-201ENST00000411258 284 ntBASIC4.71□□□□□ -1.66
PCDHB11Q9Y5F2 AC114755.2-201ENST00000413520 361 ntBASIC4.71□□□□□ -1.66
PCDHB11Q9Y5F2 BX510359.2-201ENST00000417920 305 ntBASIC4.71□□□□□ -1.66
PCDHB11Q9Y5F2 AC012306.1-201ENST00000423267 114 ntBASIC4.71□□□□□ -1.66
PCDHB11Q9Y5F2 MAGEA8-AS1-201ENST00000427671 476 ntTSL 3 BASIC4.71□□□□□ -1.66
PCDHB11Q9Y5F2 AP000844.1-201ENST00000446631 577 ntTSL 3 BASIC4.71□□□□□ -1.66
PCDHB11Q9Y5F2 RPL23AP56-201ENST00000460778 453 ntBASIC4.71□□□□□ -1.66
PCDHB11Q9Y5F2 AL591473.1-201ENST00000464297 313 ntBASIC4.71□□□□□ -1.66
PCDHB11Q9Y5F2 AC011276.1-201ENST00000469688 323 ntBASIC4.71□□□□□ -1.66
PCDHB11Q9Y5F2 RPL30P12-201ENST00000474666 353 ntBASIC4.71□□□□□ -1.66
PCDHB11Q9Y5F2 AL159163.1-201ENST00000507747 600 ntAPPRIS P1 TSL 5 BASIC4.71□□□□□ -1.66
PCDHB11Q9Y5F2 SAR1B-211ENST00000509937 455 ntTSL 5 BASIC4.71□□□□□ -1.66
Retrieved 100 of 98,524 protein–RNA pairs in 117.7 ms