Protein–RNA interactions for Protein: Q9XRX5

HHLA3, HERV-H LTR-associating protein 3, humanhuman

Predictions only

Length 114 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HHLA3Q9XRX5 CLIC4P2-201ENST00000601934 717 ntBASIC1.15□□□□□ -2.23
HHLA3Q9XRX5 SNRPGP17-201ENST00000603780 214 ntBASIC1.15□□□□□ -2.23
HHLA3Q9XRX5 AL356596.1-201ENST00000624230 379 ntBASIC1.15□□□□□ -2.23
HHLA3Q9XRX5 AL138960.2-201ENST00000625145 535 ntBASIC1.15□□□□□ -2.23
HHLA3Q9XRX5 MTND5P42-201ENST00000637720 498 ntBASIC1.15□□□□□ -2.23
HHLA3Q9XRX5 CD44-239ENST00000639002 528 ntTSL 1 (best) BASIC1.15□□□□□ -2.23
HHLA3Q9XRX5 CFHR4-204ENST00000608469 1601 ntTSL 1 (best) BASIC1.15□□□□□ -2.23
HHLA3Q9XRX5 SNORD115-3-201ENST00000363100 82 ntBASIC1.14□□□□□ -2.23
HHLA3Q9XRX5 RNU6-723P-201ENST00000383973 107 ntBASIC1.14□□□□□ -2.23
HHLA3Q9XRX5 SNORA75B-201ENST00000384053 137 ntBASIC1.14□□□□□ -2.23
HHLA3Q9XRX5 RNU1-57P-201ENST00000384491 166 ntBASIC1.14□□□□□ -2.23
HHLA3Q9XRX5 MIR320A-201ENST00000385302 82 ntBASIC1.14□□□□□ -2.23
HHLA3Q9XRX5 TRDJ2-201ENST00000390475 54 ntAPPRIS P1 BASIC1.14□□□□□ -2.23
HHLA3Q9XRX5 SNORA40.19-201ENST00000390846 128 ntBASIC1.14□□□□□ -2.23
HHLA3Q9XRX5 CISD1P1-201ENST00000393907 327 ntBASIC1.14□□□□□ -2.23
HHLA3Q9XRX5 AF130351.1-202ENST00000400562 808 ntAPPRIS P5 TSL 3 BASIC1.14□□□□□ -2.23
HHLA3Q9XRX5 RNU4-22P-201ENST00000411058 166 ntBASIC1.14□□□□□ -2.23
HHLA3Q9XRX5 RN7SKP101-201ENST00000411376 320 ntBASIC1.14□□□□□ -2.23
HHLA3Q9XRX5 AC016831.2-201ENST00000417179 352 ntBASIC1.14□□□□□ -2.23
HHLA3Q9XRX5 LINC01065-201ENST00000417989 577 ntTSL 3 BASIC1.14□□□□□ -2.23
HHLA3Q9XRX5 MTND2P29-201ENST00000438595 412 ntBASIC1.14□□□□□ -2.23
HHLA3Q9XRX5 AC007003.1-202ENST00000439318 349 ntTSL 5 BASIC1.14□□□□□ -2.23
HHLA3Q9XRX5 HSPE1P24-201ENST00000450782 238 ntBASIC1.14□□□□□ -2.23
HHLA3Q9XRX5 AC099566.1-212ENST00000451675 799 ntTSL 3 BASIC1.14□□□□□ -2.23
HHLA3Q9XRX5 SPIN4-AS1-201ENST00000451979 426 ntTSL 2 BASIC1.14□□□□□ -2.23
HHLA3Q9XRX5 SSXP1-201ENST00000453640 473 ntBASIC1.14□□□□□ -2.23
HHLA3Q9XRX5 AL356272.1-201ENST00000454538 832 ntTSL 2 BASIC1.14□□□□□ -2.23
HHLA3Q9XRX5 ZNF736P4Y-201ENST00000454995 1243 ntBASIC1.14□□□□□ -2.23
HHLA3Q9XRX5 AL024497.2-201ENST00000457081 317 ntTSL 3 BASIC1.14□□□□□ -2.23
HHLA3Q9XRX5 AC023790.1-201ENST00000482174 347 ntBASIC1.14□□□□□ -2.23
HHLA3Q9XRX5 AC079943.2-201ENST00000488999 716 ntTSL 3 BASIC1.14□□□□□ -2.23
HHLA3Q9XRX5 SUB1-206ENST00000506237 908 ntAPPRIS P1 TSL 2 BASIC1.14□□□□□ -2.23
HHLA3Q9XRX5 AC110767.1-201ENST00000508374 239 ntTSL 3 BASIC1.14□□□□□ -2.23
HHLA3Q9XRX5 AC117460.1-201ENST00000508964 467 ntTSL 3 BASIC1.14□□□□□ -2.23
HHLA3Q9XRX5 RNU6-548P-201ENST00000517083 115 ntBASIC1.14□□□□□ -2.23
HHLA3Q9XRX5 RNU6-586P-201ENST00000517265 104 ntBASIC1.14□□□□□ -2.23
HHLA3Q9XRX5 AP004607.1-201ENST00000524456 203 ntBASIC1.14□□□□□ -2.23
HHLA3Q9XRX5 ARL2BPP2-201ENST00000550907 489 ntBASIC1.14□□□□□ -2.23
HHLA3Q9XRX5 IMMP1LP2-201ENST00000552954 492 ntBASIC1.14□□□□□ -2.23
HHLA3Q9XRX5 AL135746.1-201ENST00000554205 547 ntTSL 3 BASIC1.14□□□□□ -2.23
HHLA3Q9XRX5 AC022254.1-201ENST00000567857 235 ntBASIC1.14□□□□□ -2.23
HHLA3Q9XRX5 AC136618.2-201ENST00000575091 400 ntBASIC1.14□□□□□ -2.23
HHLA3Q9XRX5 AC021646.1-201ENST00000605469 484 ntBASIC1.14□□□□□ -2.23
HHLA3Q9XRX5 RNU6-88P-201ENST00000606801 100 ntBASIC1.14□□□□□ -2.23
HHLA3Q9XRX5 AC098614.4-201ENST00000607601 462 ntBASIC1.14□□□□□ -2.23
HHLA3Q9XRX5 AL391813.2-201ENST00000609113 322 ntBASIC1.14□□□□□ -2.23
HHLA3Q9XRX5 NF1-214ENST00000490416 1329 ntTSL 3 BASIC1.14□□□□□ -2.23
HHLA3Q9XRX5 RBBP8P1-201ENST00000449447 1844 ntBASIC1.13□□□□□ -2.23
HHLA3Q9XRX5 ANKRD20A9P-201ENST00000457997 2978 ntBASIC1.13□□□□□ -2.23
HHLA3Q9XRX5 SEMG2-201ENST00000372769 2051 ntAPPRIS P1 TSL 1 (best) BASIC1.13□□□□□ -2.23
HHLA3Q9XRX5 SNORD114-19-201ENST00000363072 75 ntBASIC1.13□□□□□ -2.23
HHLA3Q9XRX5 RNU5E-10P-201ENST00000363506 118 ntBASIC1.13□□□□□ -2.23
HHLA3Q9XRX5 SNORA4.1-201ENST00000364263 144 ntBASIC1.13□□□□□ -2.23
HHLA3Q9XRX5 MIR301A-201ENST00000385261 86 ntBASIC1.13□□□□□ -2.23
HHLA3Q9XRX5 MIR1262-201ENST00000408276 93 ntBASIC1.13□□□□□ -2.23
HHLA3Q9XRX5 RNU2-36P-201ENST00000410361 191 ntBASIC1.13□□□□□ -2.23
HHLA3Q9XRX5 RNU6-1025P-201ENST00000410629 104 ntBASIC1.13□□□□□ -2.23
HHLA3Q9XRX5 BX510359.4-201ENST00000423750 193 ntBASIC1.13□□□□□ -2.23
HHLA3Q9XRX5 RAC1P6-201ENST00000423911 575 ntBASIC1.13□□□□□ -2.23
HHLA3Q9XRX5 AC009313.1-201ENST00000425470 503 ntTSL 3 BASIC1.13□□□□□ -2.23
HHLA3Q9XRX5 AL592466.1-201ENST00000428346 307 ntTSL 5 BASIC1.13□□□□□ -2.23
HHLA3Q9XRX5 AL591704.1-201ENST00000432574 275 ntBASIC1.13□□□□□ -2.23
HHLA3Q9XRX5 AL357134.1-201ENST00000445848 426 ntBASIC1.13□□□□□ -2.23
HHLA3Q9XRX5 RNU6-953P-201ENST00000459154 107 ntBASIC1.13□□□□□ -2.23
HHLA3Q9XRX5 FO393415.2-201ENST00000480085 343 ntBASIC1.13□□□□□ -2.23
HHLA3Q9XRX5 LINC02064-201ENST00000506492 470 ntTSL 5 BASIC1.13□□□□□ -2.23
HHLA3Q9XRX5 AC110009.1-201ENST00000512965 451 ntTSL 5 BASIC1.13□□□□□ -2.23
HHLA3Q9XRX5 RNU6-914P-201ENST00000516749 109 ntBASIC1.13□□□□□ -2.23
HHLA3Q9XRX5 RNU6-1315P-201ENST00000517187 99 ntBASIC1.13□□□□□ -2.23
HHLA3Q9XRX5 XIRP2-AS1-201ENST00000525330 776 ntTSL 3 BASIC1.13□□□□□ -2.23
HHLA3Q9XRX5 HMSD-204ENST00000526932 162 ntTSL 3 BASIC1.13□□□□□ -2.23
HHLA3Q9XRX5 DUXAP5-201ENST00000529668 529 ntBASIC1.13□□□□□ -2.23
HHLA3Q9XRX5 AC013828.2-201ENST00000532487 235 ntBASIC1.13□□□□□ -2.23
HHLA3Q9XRX5 AL355076.2-202ENST00000553754 574 ntTSL 4 BASIC1.13□□□□□ -2.23
HHLA3Q9XRX5 AC027458.1-201ENST00000563639 613 ntTSL 1 (best) BASIC1.13□□□□□ -2.23
HHLA3Q9XRX5 AL356432.3-201ENST00000568952 465 ntBASIC1.13□□□□□ -2.23
HHLA3Q9XRX5 SNORD53B-201ENST00000577887 78 ntBASIC1.13□□□□□ -2.23
HHLA3Q9XRX5 AC011933.3-201ENST00000578226 372 ntTSL 1 (best) BASIC1.13□□□□□ -2.23
HHLA3Q9XRX5 MIR3683-201ENST00000580847 82 ntBASIC1.13□□□□□ -2.23
HHLA3Q9XRX5 BNIP3P25-201ENST00000596023 559 ntBASIC1.13□□□□□ -2.23
HHLA3Q9XRX5 VN1R82P-201ENST00000601481 356 ntBASIC1.13□□□□□ -2.23
HHLA3Q9XRX5 AC103810.8-201ENST00000607347 118 ntBASIC1.13□□□□□ -2.23
HHLA3Q9XRX5 AC022893.3-201ENST00000607665 437 ntBASIC1.13□□□□□ -2.23
HHLA3Q9XRX5 PRKCQ-AS1-208ENST00000608453 587 ntTSL 5 BASIC1.13□□□□□ -2.23
HHLA3Q9XRX5 AC072039.2-201ENST00000608883 439 ntBASIC1.13□□□□□ -2.23
HHLA3Q9XRX5 AC093788.1-201ENST00000609356 927 ntBASIC1.13□□□□□ -2.23
HHLA3Q9XRX5 AL365204.3-201ENST00000612448 685 ntBASIC1.13□□□□□ -2.23
HHLA3Q9XRX5 AC130324.3-201ENST00000614165 542 ntBASIC1.13□□□□□ -2.23
HHLA3Q9XRX5 MIR7974-201ENST00000615835 79 ntBASIC1.13□□□□□ -2.23
HHLA3Q9XRX5 AL589994.2-201ENST00000621124 579 ntBASIC1.13□□□□□ -2.23
HHLA3Q9XRX5 AP000648.3-201ENST00000623539 4507 ntBASIC1.13□□□□□ -2.23
HHLA3Q9XRX5 CUL2-206ENST00000421317 2376 ntTSL 2 BASIC1.13□□□□□ -2.23
HHLA3Q9XRX5 AC099786.3-201ENST00000565735 1410 ntBASIC1.13□□□□□ -2.23
HHLA3Q9XRX5 GABRA2-209ENST00000510861 3411 ntAPPRIS P1 TSL 5 BASIC1.12□□□□□ -2.23
HHLA3Q9XRX5 RNU1-42P-201ENST00000364033 160 ntBASIC1.12□□□□□ -2.23
HHLA3Q9XRX5 MIR186-201ENST00000384988 86 ntBASIC1.12□□□□□ -2.23
HHLA3Q9XRX5 RNA5SP212-201ENST00000391223 107 ntBASIC1.12□□□□□ -2.23
HHLA3Q9XRX5 SNORA11.2-201ENST00000408318 127 ntBASIC1.12□□□□□ -2.23
HHLA3Q9XRX5 AC092809.3-201ENST00000415453 231 ntBASIC1.12□□□□□ -2.23
HHLA3Q9XRX5 FO680682.1-201ENST00000421261 345 ntTSL 3 BASIC1.12□□□□□ -2.23
Retrieved 100 of 98,524 protein–RNA pairs in 111.8 ms