Protein–RNA interactions for Protein: Q9UJU5

FOXD3, Forkhead box protein D3, humanhuman

Predicted RBP Predictions only

Length 478 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
FOXD3Q9UJU5 PRG4-203ENST00000367485 4765 ntAPPRIS ALT2 TSL 5 BASIC4.26□□□□□ -1.73
FOXD3Q9UJU5 MYOT-201ENST00000239926 2337 ntAPPRIS P1 TSL 1 (best) BASIC4.26□□□□□ -1.73
FOXD3Q9UJU5 PTPN22-201ENST00000359785 3654 ntAPPRIS P2 TSL 1 (best) BASIC4.26□□□□□ -1.73
FOXD3Q9UJU5 GAGE12B-201ENST00000361446 117 ntAPPRIS P1 BASIC4.26□□□□□ -1.73
FOXD3Q9UJU5 RNU6-1285P-201ENST00000363480 105 ntBASIC4.26□□□□□ -1.73
FOXD3Q9UJU5 RNU6-1020P-201ENST00000363684 107 ntBASIC4.26□□□□□ -1.73
FOXD3Q9UJU5 RNU6-622P-201ENST00000384272 103 ntBASIC4.26□□□□□ -1.73
FOXD3Q9UJU5 Y_RNA.590-201ENST00000410140 107 ntBASIC4.26□□□□□ -1.73
FOXD3Q9UJU5 Y_RNA.595-201ENST00000410403 105 ntBASIC4.26□□□□□ -1.73
FOXD3Q9UJU5 RNU2-61P-201ENST00000411069 191 ntBASIC4.26□□□□□ -1.73
FOXD3Q9UJU5 AC012306.1-201ENST00000423267 114 ntBASIC4.26□□□□□ -1.73
FOXD3Q9UJU5 AL160411.1-201ENST00000429853 400 ntTSL 2 BASIC4.26□□□□□ -1.73
FOXD3Q9UJU5 AC112220.1-201ENST00000434628 355 ntBASIC4.26□□□□□ -1.73
FOXD3Q9UJU5 RPL39P29-201ENST00000447779 157 ntBASIC4.26□□□□□ -1.73
FOXD3Q9UJU5 MIR1302-2HG-201ENST00000469289 535 ntTSL 5 BASIC4.26□□□□□ -1.73
FOXD3Q9UJU5 APOA2-207ENST00000470459 416 ntTSL 5 BASIC4.26□□□□□ -1.73
FOXD3Q9UJU5 AKIRIN2P1-201ENST00000505898 352 ntBASIC4.26□□□□□ -1.73
FOXD3Q9UJU5 RNU1-61P-201ENST00000516107 151 ntBASIC4.26□□□□□ -1.73
FOXD3Q9UJU5 RNU6-581P-201ENST00000516214 105 ntBASIC4.26□□□□□ -1.73
FOXD3Q9UJU5 Y_RNA.703-201ENST00000516846 111 ntBASIC4.26□□□□□ -1.73
FOXD3Q9UJU5 RNU6-928P-201ENST00000516876 104 ntBASIC4.26□□□□□ -1.73
FOXD3Q9UJU5 TOMM20P2-201ENST00000540082 421 ntBASIC4.26□□□□□ -1.73
FOXD3Q9UJU5 AC006199.1-201ENST00000548728 219 ntBASIC4.26□□□□□ -1.73
FOXD3Q9UJU5 AC136624.4-201ENST00000573044 370 ntBASIC4.26□□□□□ -1.73
FOXD3Q9UJU5 MIR5699-201ENST00000578903 90 ntBASIC4.26□□□□□ -1.73
FOXD3Q9UJU5 AC022726.1-201ENST00000587475 207 ntBASIC4.26□□□□□ -1.73
FOXD3Q9UJU5 AC010999.1-201ENST00000611856 324 ntBASIC4.26□□□□□ -1.73
FOXD3Q9UJU5 AC073308.1-201ENST00000623696 305 ntBASIC4.26□□□□□ -1.73
FOXD3Q9UJU5 LINC01002-215ENST00000632203 314 ntTSL 5 BASIC4.26□□□□□ -1.73
FOXD3Q9UJU5 IGHVIII-44-202ENST00000636235 289 ntBASIC4.26□□□□□ -1.73
FOXD3Q9UJU5 ZNF28-203ENST00000438150 5171 ntTSL 2 BASIC4.26□□□□□ -1.73
FOXD3Q9UJU5 FGF13-202ENST00000315930 19519 ntAPPRIS P1 TSL 1 (best) BASIC4.26□□□□□ -1.73
FOXD3Q9UJU5 RDH10-AS1-201ENST00000514599 3261 ntTSL 2 BASIC4.26□□□□□ -1.73
FOXD3Q9UJU5 LINC01376-202ENST00000424895 1949 ntTSL 2 BASIC4.26□□□□□ -1.73
FOXD3Q9UJU5 ARHGEF12-202ENST00000397843 9660 ntAPPRIS P1 TSL 1 (best) BASIC4.26□□□□□ -1.73
FOXD3Q9UJU5 MTRR-202ENST00000440940 3215 ntAPPRIS P1 TSL 1 (best) BASIC4.26□□□□□ -1.73
FOXD3Q9UJU5 CEP192-203ENST00000506447 7960 ntAPPRIS P2 TSL 5 BASIC4.26□□□□□ -1.73
FOXD3Q9UJU5 ADGRL2-204ENST00000370715 5585 ntTSL 1 (best) BASIC4.26□□□□□ -1.73
FOXD3Q9UJU5 ABCA12-201ENST00000272895 9100 ntAPPRIS P1 TSL 1 (best) BASIC4.26□□□□□ -1.73
FOXD3Q9UJU5 AL109809.4-201ENST00000603520 2185 ntBASIC4.26□□□□□ -1.73
FOXD3Q9UJU5 MAPK10-286ENST00000641208 8747 ntBASIC4.26□□□□□ -1.73
FOXD3Q9UJU5 CDR1-201ENST00000370532 2467 ntAPPRIS P1 BASIC4.26□□□□□ -1.73
FOXD3Q9UJU5 AC027290.2-201ENST00000623210 18662 ntBASIC4.25□□□□□ -1.73
FOXD3Q9UJU5 ADGRL3-202ENST00000504896 4816 ntTSL 5 BASIC4.25□□□□□ -1.73
FOXD3Q9UJU5 MMRN1-204ENST00000508372 3234 ntTSL 2 BASIC4.25□□□□□ -1.73
FOXD3Q9UJU5 LINC00283-201ENST00000430111 1947 ntTSL 5 BASIC4.25□□□□□ -1.73
FOXD3Q9UJU5 CLHC1-201ENST00000401408 2248 ntAPPRIS P1 TSL 1 (best) BASIC4.25□□□□□ -1.73
FOXD3Q9UJU5 CNTRL-205ENST00000373850 5824 ntTSL 2 BASIC4.25□□□□□ -1.73
FOXD3Q9UJU5 AL157777.2-201ENST00000258070 137 ntBASIC4.25□□□□□ -1.73
FOXD3Q9UJU5 RNU6-682P-201ENST00000363843 106 ntBASIC4.25□□□□□ -1.73
FOXD3Q9UJU5 RNU6-961P-201ENST00000363893 105 ntBASIC4.25□□□□□ -1.73
FOXD3Q9UJU5 RNU6-270P-201ENST00000364131 105 ntBASIC4.25□□□□□ -1.73
FOXD3Q9UJU5 SNORA70F-201ENST00000384142 135 ntBASIC4.25□□□□□ -1.73
FOXD3Q9UJU5 SNORA36A-201ENST00000384221 132 ntBASIC4.25□□□□□ -1.73
FOXD3Q9UJU5 SNORA1.3-201ENST00000384676 136 ntBASIC4.25□□□□□ -1.73
FOXD3Q9UJU5 RNA5SP332-201ENST00000391063 115 ntBASIC4.25□□□□□ -1.73
FOXD3Q9UJU5 RN7SKP267-201ENST00000410381 285 ntBASIC4.25□□□□□ -1.73
FOXD3Q9UJU5 RPL18P10-201ENST00000425606 538 ntBASIC4.25□□□□□ -1.73
FOXD3Q9UJU5 AC091390.1-201ENST00000433904 331 ntBASIC4.25□□□□□ -1.73
FOXD3Q9UJU5 HMGB1P37-201ENST00000439613 609 ntBASIC4.25□□□□□ -1.73
FOXD3Q9UJU5 LINC01162-201ENST00000447262 447 ntTSL 5 BASIC4.25□□□□□ -1.73
FOXD3Q9UJU5 FO393401.1-201ENST00000453914 600 ntTSL 3 BASIC4.25□□□□□ -1.73
FOXD3Q9UJU5 AC012081.1-201ENST00000462382 477 ntTSL 3 BASIC4.25□□□□□ -1.73
FOXD3Q9UJU5 RPS29P20-201ENST00000489592 171 ntBASIC4.25□□□□□ -1.73
FOXD3Q9UJU5 AC008869.1-201ENST00000510938 442 ntTSL 2 BASIC4.25□□□□□ -1.73
FOXD3Q9UJU5 LINC02230-201ENST00000511174 301 ntTSL 5 BASIC4.25□□□□□ -1.73
FOXD3Q9UJU5 RNU2-58P-201ENST00000516403 183 ntBASIC4.25□□□□□ -1.73
FOXD3Q9UJU5 Y_RNA.679-201ENST00000516416 91 ntBASIC4.25□□□□□ -1.73
FOXD3Q9UJU5 ACA59.2-201ENST00000517061 156 ntBASIC4.25□□□□□ -1.73
FOXD3Q9UJU5 RPL21P7-201ENST00000557463 483 ntBASIC4.25□□□□□ -1.73
FOXD3Q9UJU5 AC005176.2-201ENST00000596933 147 ntBASIC4.25□□□□□ -1.73
FOXD3Q9UJU5 AC008749.1-201ENST00000597650 306 ntBASIC4.25□□□□□ -1.73
FOXD3Q9UJU5 AL590240.4-201ENST00000616908 390 ntBASIC4.25□□□□□ -1.73
FOXD3Q9UJU5 ZZZ3-202ENST00000370801 4328 ntAPPRIS P1 TSL 1 (best) BASIC4.25□□□□□ -1.73
FOXD3Q9UJU5 OR56A1-202ENST00000641423 6096 ntAPPRIS P1 BASIC4.25□□□□□ -1.73
FOXD3Q9UJU5 MAP3K19-201ENST00000358371 3719 ntTSL 1 (best) BASIC4.25□□□□□ -1.73
FOXD3Q9UJU5 KMO-204ENST00000366559 5261 ntAPPRIS P2 TSL 1 (best) BASIC4.25□□□□□ -1.73
FOXD3Q9UJU5 EEF1A1-211ENST00000615060 3508 ntTSL 5 BASIC4.25□□□□□ -1.73
FOXD3Q9UJU5 PTPN22-202ENST00000420377 2726 ntAPPRIS ALT2 TSL 1 (best) BASIC4.24□□□□□ -1.73
FOXD3Q9UJU5 MAP2-202ENST00000360351 9711 ntAPPRIS P2 TSL 5 BASIC4.24□□□□□ -1.73
FOXD3Q9UJU5 OR9H1P-201ENST00000446393 4888 ntAPPRIS P1 BASIC4.24□□□□□ -1.73
FOXD3Q9UJU5 SLC26A7-209ENST00000617078 5094 ntTSL 5 BASIC4.24□□□□□ -1.73
FOXD3Q9UJU5 PPP1R9A-201ENST00000289495 3983 ntTSL 1 (best) BASIC4.24□□□□□ -1.73
FOXD3Q9UJU5 RNU6-873P-201ENST00000363833 107 ntBASIC4.24□□□□□ -1.73
FOXD3Q9UJU5 PTMAP5-201ENST00000393073 333 ntBASIC4.24□□□□□ -1.73
FOXD3Q9UJU5 RN7SKP53-201ENST00000411337 315 ntBASIC4.24□□□□□ -1.73
FOXD3Q9UJU5 POLR2KP2-201ENST00000438155 177 ntBASIC4.24□□□□□ -1.73
FOXD3Q9UJU5 AL162386.2-201ENST00000442428 457 ntTSL 3 BASIC4.24□□□□□ -1.73
FOXD3Q9UJU5 AL392046.1-203ENST00000450106 651 ntTSL 2 BASIC4.24□□□□□ -1.73
FOXD3Q9UJU5 RPS4XP13-201ENST00000483219 789 ntBASIC4.24□□□□□ -1.73
FOXD3Q9UJU5 AC091959.1-201ENST00000495857 238 ntBASIC4.24□□□□□ -1.73
FOXD3Q9UJU5 RPL7P47-201ENST00000497299 556 ntBASIC4.24□□□□□ -1.73
FOXD3Q9UJU5 AC020593.1-201ENST00000507399 299 ntBASIC4.24□□□□□ -1.73
FOXD3Q9UJU5 AC006445.2-201ENST00000510061 472 ntBASIC4.24□□□□□ -1.73
FOXD3Q9UJU5 AC034223.1-201ENST00000511054 599 ntTSL 3 BASIC4.24□□□□□ -1.73
FOXD3Q9UJU5 AC074133.1-201ENST00000515696 183 ntBASIC4.24□□□□□ -1.73
FOXD3Q9UJU5 SNORA27.4-201ENST00000516650 95 ntBASIC4.24□□□□□ -1.73
FOXD3Q9UJU5 AP000873.2-206ENST00000529811 429 ntTSL 2 BASIC4.24□□□□□ -1.73
FOXD3Q9UJU5 AC133555.2-201ENST00000550213 292 ntBASIC4.24□□□□□ -1.73
FOXD3Q9UJU5 AL110118.1-201ENST00000553543 400 ntBASIC4.24□□□□□ -1.73
Retrieved 100 of 98,524 protein–RNA pairs in 149.2 ms