Protein–RNA interactions for Protein: Q9HCU0

CD248, Endosialin, humanhuman

Predictions only

Length 757 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CD248Q9HCU0 SNORA23-201ENST00000365128 182 ntBASIC3.97□□□□□ -1.77
CD248Q9HCU0 SNORD51-201ENST00000384320 80 ntBASIC3.97□□□□□ -1.77
CD248Q9HCU0 SNORA19-201ENST00000384737 128 ntBASIC3.97□□□□□ -1.77
CD248Q9HCU0 NPS-201ENST00000398023 270 ntAPPRIS P1 TSL 5 BASIC3.97□□□□□ -1.77
CD248Q9HCU0 MS4A4E-202ENST00000398986 522 ntAPPRIS P1 TSL 5 BASIC3.97□□□□□ -1.77
CD248Q9HCU0 AL139039.1-201ENST00000401900 692 ntBASIC3.97□□□□□ -1.77
CD248Q9HCU0 RPS4XP7-201ENST00000406274 780 ntBASIC3.97□□□□□ -1.77
CD248Q9HCU0 AL355989.1-202ENST00000419406 408 ntTSL 3 BASIC3.97□□□□□ -1.77
CD248Q9HCU0 AL078601.2-201ENST00000429444 474 ntTSL 2 BASIC3.97□□□□□ -1.77
CD248Q9HCU0 AC091286.1-201ENST00000431233 461 ntBASIC3.97□□□□□ -1.77
CD248Q9HCU0 AL645568.3-201ENST00000433683 316 ntBASIC3.97□□□□□ -1.77
CD248Q9HCU0 FTH1P25-201ENST00000447665 469 ntBASIC3.97□□□□□ -1.77
CD248Q9HCU0 MTND4LP30-201ENST00000454092 297 ntBASIC3.97□□□□□ -1.77
CD248Q9HCU0 PTP4A2-203ENST00000470404 575 ntTSL 3 BASIC3.97□□□□□ -1.77
CD248Q9HCU0 RNU6-138P-201ENST00000515952 107 ntBASIC3.97□□□□□ -1.77
CD248Q9HCU0 RNU6-182P-201ENST00000516970 105 ntBASIC3.97□□□□□ -1.77
CD248Q9HCU0 AC100807.1-201ENST00000517640 552 ntTSL 5 BASIC3.97□□□□□ -1.77
CD248Q9HCU0 AC087664.2-201ENST00000522898 551 ntTSL 4 BASIC3.97□□□□□ -1.77
CD248Q9HCU0 AP002833.1-201ENST00000530572 566 ntTSL 3 BASIC3.97□□□□□ -1.77
CD248Q9HCU0 AC112481.1-201ENST00000549669 901 ntTSL 2 BASIC3.97□□□□□ -1.77
CD248Q9HCU0 AC009145.1-201ENST00000563230 433 ntTSL 3 BASIC3.97□□□□□ -1.77
CD248Q9HCU0 AC109446.1-201ENST00000566172 220 ntBASIC3.97□□□□□ -1.77
CD248Q9HCU0 TMCO5A-203ENST00000558158 2894 ntAPPRIS ALT2 TSL 3 BASIC3.97□□□□□ -1.77
CD248Q9HCU0 UBE3AP2-201ENST00000429033 2259 ntBASIC3.97□□□□□ -1.77
CD248Q9HCU0 CBLL1-201ENST00000222597 2003 ntAPPRIS ALT1 TSL 1 (best) BASIC3.97□□□□□ -1.77
CD248Q9HCU0 CEP44-201ENST00000296519 4173 ntAPPRIS P1 TSL 1 (best) BASIC3.96□□□□□ -1.77
CD248Q9HCU0 LRRTM4-201ENST00000409088 3616 ntTSL 1 (best) BASIC3.96□□□□□ -1.77
CD248Q9HCU0 GABRG2-213ENST00000639046 3058 ntTSL 5 BASIC3.96□□□□□ -1.77
CD248Q9HCU0 SCN3A-201ENST00000283254 9091 ntAPPRIS P3 TSL 1 (best) BASIC3.96□□□□□ -1.77
CD248Q9HCU0 DTWD1-201ENST00000251250 13776 ntAPPRIS P1 TSL 1 (best) BASIC3.96□□□□□ -1.78
CD248Q9HCU0 AC110774.1-201ENST00000623567 2018 ntBASIC3.96□□□□□ -1.78
CD248Q9HCU0 SNORA5A-201ENST00000384111 134 ntBASIC3.96□□□□□ -1.78
CD248Q9HCU0 Y_RNA.562-201ENST00000384695 113 ntBASIC3.96□□□□□ -1.78
CD248Q9HCU0 HSPE1P8-201ENST00000406997 288 ntBASIC3.96□□□□□ -1.78
CD248Q9HCU0 SNORA3.3-201ENST00000408712 125 ntBASIC3.96□□□□□ -1.78
CD248Q9HCU0 ELOCP20-201ENST00000422460 345 ntBASIC3.96□□□□□ -1.78
CD248Q9HCU0 AL356010.2-201ENST00000422844 197 ntTSL 3 BASIC3.96□□□□□ -1.78
CD248Q9HCU0 AC139712.2-201ENST00000424302 339 ntBASIC3.96□□□□□ -1.78
CD248Q9HCU0 AC069257.1-202ENST00000425275 422 ntTSL 3 BASIC3.96□□□□□ -1.78
CD248Q9HCU0 RPS3AP12-201ENST00000443616 753 ntBASIC3.96□□□□□ -1.78
CD248Q9HCU0 MTCO3P8-201ENST00000453691 755 ntBASIC3.96□□□□□ -1.78
CD248Q9HCU0 AC011005.2-201ENST00000487324 359 ntBASIC3.96□□□□□ -1.78
CD248Q9HCU0 HMGB1P35-201ENST00000503360 598 ntBASIC3.96□□□□□ -1.78
CD248Q9HCU0 AC093852.1-201ENST00000503587 266 ntBASIC3.96□□□□□ -1.78
CD248Q9HCU0 AC022447.4-201ENST00000504053 364 ntBASIC3.96□□□□□ -1.78
CD248Q9HCU0 AC004052.1-202ENST00000505680 516 ntTSL 3 BASIC3.96□□□□□ -1.78
CD248Q9HCU0 AC092436.3-201ENST00000511788 257 ntBASIC3.96□□□□□ -1.78
CD248Q9HCU0 LEF1-218ENST00000512172 598 ntTSL 2 BASIC3.96□□□□□ -1.78
CD248Q9HCU0 Y_RNA.673-201ENST00000516306 88 ntBASIC3.96□□□□□ -1.78
CD248Q9HCU0 AP002768.1-201ENST00000526741 320 ntTSL 3 BASIC3.96□□□□□ -1.78
CD248Q9HCU0 SETP7-201ENST00000552169 453 ntBASIC3.96□□□□□ -1.78
CD248Q9HCU0 MIR5188-201ENST00000583467 113 ntBASIC3.96□□□□□ -1.78
CD248Q9HCU0 BRDTP1-201ENST00000605735 677 ntBASIC3.96□□□□□ -1.78
CD248Q9HCU0 GEN1-201ENST00000317402 9854 ntAPPRIS P1 TSL 2 BASIC3.96□□□□□ -1.78
CD248Q9HCU0 NDST3-201ENST00000296499 5961 ntAPPRIS P1 TSL 1 (best) BASIC3.96□□□□□ -1.78
CD248Q9HCU0 BRCA2-206ENST00000544455 10984 ntAPPRIS P1 TSL 1 (best) BASIC3.96□□□□□ -1.78
CD248Q9HCU0 LRRN3-203ENST00000422987 3513 ntAPPRIS P1 TSL 1 (best) BASIC3.96□□□□□ -1.78
CD248Q9HCU0 AC008669.1-201ENST00000565823 2178 ntBASIC3.96□□□□□ -1.78
CD248Q9HCU0 LINC01733-201ENST00000449316 4604 ntTSL 1 (best) BASIC3.96□□□□□ -1.78
CD248Q9HCU0 SYNE1-212ENST00000423061 27436 ntAPPRIS ALT2 TSL 1 (best) BASIC3.96□□□□□ -1.78
CD248Q9HCU0 MAPK10-362ENST00000641864 4484 ntBASIC3.95□□□□□ -1.78
CD248Q9HCU0 ZNF72P-201ENST00000425869 1908 ntBASIC3.95□□□□□ -1.78
CD248Q9HCU0 TUSC7-203ENST00000477539 2415 ntTSL 1 (best) BASIC3.95□□□□□ -1.78
CD248Q9HCU0 LYST-201ENST00000389793 13480 ntAPPRIS P1 TSL 5 BASIC3.95□□□□□ -1.78
CD248Q9HCU0 PPP1R12A-204ENST00000546369 2977 ntTSL 2 BASIC3.95□□□□□ -1.78
CD248Q9HCU0 SPZ1-201ENST00000296739 1868 ntAPPRIS P2 BASIC3.95□□□□□ -1.78
CD248Q9HCU0 MTND5P6-201ENST00000422338 1798 ntBASIC3.95□□□□□ -1.78
CD248Q9HCU0 DEFB108B-201ENST00000328698 222 ntAPPRIS P1 TSL 1 (best) BASIC3.95□□□□□ -1.78
CD248Q9HCU0 RFX3-203ENST00000381984 364 ntTSL 3 BASIC3.95□□□□□ -1.78
CD248Q9HCU0 RNU6-701P-201ENST00000384059 107 ntBASIC3.95□□□□□ -1.78
CD248Q9HCU0 Y_RNA.478-201ENST00000384358 107 ntBASIC3.95□□□□□ -1.78
CD248Q9HCU0 MIR517A-201ENST00000385001 87 ntBASIC3.95□□□□□ -1.78
CD248Q9HCU0 TRAV24-201ENST00000390453 343 ntAPPRIS P1 BASIC3.95□□□□□ -1.78
CD248Q9HCU0 RNU6-1093P-201ENST00000391194 107 ntBASIC3.95□□□□□ -1.78
CD248Q9HCU0 RPL21P17-201ENST00000397467 475 ntBASIC3.95□□□□□ -1.78
CD248Q9HCU0 AL591034.1-201ENST00000407447 340 ntBASIC3.95□□□□□ -1.78
CD248Q9HCU0 AC099677.1-201ENST00000420575 175 ntBASIC3.95□□□□□ -1.78
CD248Q9HCU0 PIGPP3-201ENST00000425307 415 ntBASIC3.95□□□□□ -1.78
CD248Q9HCU0 UBE2V1P4-201ENST00000425374 344 ntBASIC3.95□□□□□ -1.78
CD248Q9HCU0 AC241644.2-201ENST00000426504 480 ntTSL 3 BASIC3.95□□□□□ -1.78
CD248Q9HCU0 YME1L1P1-201ENST00000429435 297 ntBASIC3.95□□□□□ -1.78
CD248Q9HCU0 AL591704.1-201ENST00000432574 275 ntBASIC3.95□□□□□ -1.78
CD248Q9HCU0 AC010655.1-201ENST00000449336 292 ntBASIC3.95□□□□□ -1.78
CD248Q9HCU0 CHEK2P4-201ENST00000450340 246 ntBASIC3.95□□□□□ -1.78
CD248Q9HCU0 AC092162.2-204ENST00000451851 566 ntTSL 4 BASIC3.95□□□□□ -1.78
CD248Q9HCU0 LINC01510-203ENST00000458082 626 ntTSL 3 BASIC3.95□□□□□ -1.78
CD248Q9HCU0 U3.44-201ENST00000458938 192 ntBASIC3.95□□□□□ -1.78
CD248Q9HCU0 RNU7-187P-201ENST00000458985 68 ntBASIC3.95□□□□□ -1.78
CD248Q9HCU0 AL133162.1-201ENST00000463228 453 ntBASIC3.95□□□□□ -1.78
CD248Q9HCU0 AC008481.1-201ENST00000463278 396 ntBASIC3.95□□□□□ -1.78
CD248Q9HCU0 FO393415.2-201ENST00000480085 343 ntBASIC3.95□□□□□ -1.78
CD248Q9HCU0 RN7SL271P-201ENST00000487601 295 ntBASIC3.95□□□□□ -1.78
CD248Q9HCU0 RPL17P19-201ENST00000489069 552 ntBASIC3.95□□□□□ -1.78
CD248Q9HCU0 AC093534.2-201ENST00000511418 420 ntTSL 3 BASIC3.95□□□□□ -1.78
CD248Q9HCU0 SNORA25.11-201ENST00000515935 105 ntBASIC3.95□□□□□ -1.78
CD248Q9HCU0 PWRN1-209ENST00000568019 359 ntTSL 3 BASIC3.95□□□□□ -1.78
CD248Q9HCU0 AC011461.1-201ENST00000592671 357 ntTSL 3 BASIC3.95□□□□□ -1.78
CD248Q9HCU0 AC007998.5-201ENST00000622938 237 ntBASIC3.95□□□□□ -1.78
CD248Q9HCU0 AC110801.1-201ENST00000623590 212 ntBASIC3.95□□□□□ -1.78
CD248Q9HCU0 AC009093.8-201ENST00000641769 292 ntBASIC3.95□□□□□ -1.78
Retrieved 100 of 98,524 protein–RNA pairs in 175 ms