Protein–RNA interactions for Protein: Q9BYR3

KRTAP4-4, Keratin-associated protein 4-4, humanhuman

Predictions only

Length 166 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
KRTAP4-4Q9BYR3 SNORA68.1-201ENST00000364537 132 ntBASIC1.34□□□□□ -2.19
KRTAP4-4Q9BYR3 Y_RNA.258-201ENST00000364613 105 ntBASIC1.34□□□□□ -2.19
KRTAP4-4Q9BYR3 RNU1-74P-201ENST00000384108 171 ntBASIC1.34□□□□□ -2.19
KRTAP4-4Q9BYR3 RNU6-342P-201ENST00000384521 104 ntBASIC1.34□□□□□ -2.19
KRTAP4-4Q9BYR3 SNORD116-16-201ENST00000384533 92 ntBASIC1.34□□□□□ -2.19
KRTAP4-4Q9BYR3 MIR555-201ENST00000384987 96 ntBASIC1.34□□□□□ -2.19
KRTAP4-4Q9BYR3 U3.18-201ENST00000390880 216 ntBASIC1.34□□□□□ -2.19
KRTAP4-4Q9BYR3 SNORA68.2-201ENST00000391263 128 ntBASIC1.34□□□□□ -2.19
KRTAP4-4Q9BYR3 SDHCP2-201ENST00000398565 501 ntBASIC1.34□□□□□ -2.19
KRTAP4-4Q9BYR3 AC113608.1-201ENST00000398740 305 ntBASIC1.34□□□□□ -2.19
KRTAP4-4Q9BYR3 SNORA11.3-201ENST00000408471 128 ntBASIC1.34□□□□□ -2.19
KRTAP4-4Q9BYR3 RNA5SP177-201ENST00000410122 107 ntBASIC1.34□□□□□ -2.19
KRTAP4-4Q9BYR3 RNA5SP201-201ENST00000410316 124 ntBASIC1.34□□□□□ -2.19
KRTAP4-4Q9BYR3 Y_RNA.621-201ENST00000411065 96 ntBASIC1.34□□□□□ -2.19
KRTAP4-4Q9BYR3 RPL31P2-201ENST00000413849 377 ntBASIC1.34□□□□□ -2.19
KRTAP4-4Q9BYR3 AL139254.1-201ENST00000421114 376 ntTSL 3 BASIC1.34□□□□□ -2.19
KRTAP4-4Q9BYR3 AC134879.1-201ENST00000426062 394 ntBASIC1.34□□□□□ -2.19
KRTAP4-4Q9BYR3 TRIAP1P1-201ENST00000427062 225 ntBASIC1.34□□□□□ -2.19
KRTAP4-4Q9BYR3 LINC01805-201ENST00000436433 572 ntTSL 5 BASIC1.34□□□□□ -2.19
KRTAP4-4Q9BYR3 RPS12P17-201ENST00000438591 377 ntBASIC1.34□□□□□ -2.19
KRTAP4-4Q9BYR3 AC006026.3-201ENST00000454029 143 ntTSL 3 BASIC1.34□□□□□ -2.19
KRTAP4-4Q9BYR3 AC104849.1-201ENST00000462623 405 ntBASIC1.34□□□□□ -2.19
KRTAP4-4Q9BYR3 RN7SL145P-201ENST00000469955 296 ntBASIC1.34□□□□□ -2.19
KRTAP4-4Q9BYR3 HMGN2P9-201ENST00000476875 229 ntBASIC1.34□□□□□ -2.19
KRTAP4-4Q9BYR3 AC087385.2-201ENST00000477729 498 ntBASIC1.34□□□□□ -2.19
KRTAP4-4Q9BYR3 RN7SL654P-201ENST00000479178 292 ntBASIC1.34□□□□□ -2.19
KRTAP4-4Q9BYR3 AL035690.1-201ENST00000490892 383 ntBASIC1.34□□□□□ -2.19
KRTAP4-4Q9BYR3 RN7SL518P-201ENST00000491887 280 ntBASIC1.34□□□□□ -2.19
KRTAP4-4Q9BYR3 AC091167.1-201ENST00000492017 396 ntBASIC1.34□□□□□ -2.19
KRTAP4-4Q9BYR3 RPS29P21-201ENST00000496272 170 ntBASIC1.34□□□□□ -2.19
KRTAP4-4Q9BYR3 MRPS5P3-201ENST00000515577 166 ntBASIC1.34□□□□□ -2.19
KRTAP4-4Q9BYR3 RNU7-174P-201ENST00000516248 59 ntBASIC1.34□□□□□ -2.19
KRTAP4-4Q9BYR3 SCARNA11.1-201ENST00000516918 132 ntBASIC1.34□□□□□ -2.19
KRTAP4-4Q9BYR3 AC107952.1-201ENST00000524200 376 ntBASIC1.34□□□□□ -2.19
KRTAP4-4Q9BYR3 HMGN2P36-201ENST00000529541 409 ntBASIC1.34□□□□□ -2.19
KRTAP4-4Q9BYR3 MYL6-211ENST00000548580 528 ntTSL 2 BASIC1.34□□□□□ -2.19
KRTAP4-4Q9BYR3 CR383656.8-201ENST00000549046 145 ntBASIC1.34□□□□□ -2.19
KRTAP4-4Q9BYR3 FAM30C-201ENST00000561158 410 ntBASIC1.34□□□□□ -2.19
KRTAP4-4Q9BYR3 MIR4504-201ENST00000577413 92 ntBASIC1.34□□□□□ -2.19
KRTAP4-4Q9BYR3 MIR378H-201ENST00000579966 83 ntBASIC1.34□□□□□ -2.19
KRTAP4-4Q9BYR3 MIR4286-201ENST00000580651 93 ntBASIC1.34□□□□□ -2.19
KRTAP4-4Q9BYR3 MIR4491-201ENST00000581087 68 ntBASIC1.34□□□□□ -2.19
KRTAP4-4Q9BYR3 RN7SL52P-201ENST00000584271 284 ntBASIC1.34□□□□□ -2.19
KRTAP4-4Q9BYR3 AC018761.4-201ENST00000585742 272 ntTSL 3 BASIC1.34□□□□□ -2.19
KRTAP4-4Q9BYR3 CERS6-AS1-202ENST00000594898 499 ntTSL 5 BASIC1.34□□□□□ -2.19
KRTAP4-4Q9BYR3 MIR7162-201ENST00000611134 69 ntBASIC1.34□□□□□ -2.19
KRTAP4-4Q9BYR3 MIR8082-201ENST00000612488 81 ntBASIC1.34□□□□□ -2.19
KRTAP4-4Q9BYR3 RDM1-215ENST00000612980 501 ntTSL 1 (best) BASIC1.34□□□□□ -2.19
KRTAP4-4Q9BYR3 AC006335.3-201ENST00000613408 292 ntBASIC1.34□□□□□ -2.19
KRTAP4-4Q9BYR3 XPNPEP3-206ENST00000614001 230 ntTSL 5 BASIC1.34□□□□□ -2.19
KRTAP4-4Q9BYR3 SNX18P1Y-201ENST00000616231 511 ntBASIC1.34□□□□□ -2.19
KRTAP4-4Q9BYR3 SNORA11.6-201ENST00000619030 128 ntBASIC1.34□□□□□ -2.19
KRTAP4-4Q9BYR3 DLEU2_3.1-201ENST00000620005 73 ntBASIC1.34□□□□□ -2.19
KRTAP4-4Q9BYR3 uc_338.37-201ENST00000620113 186 ntBASIC1.34□□□□□ -2.19
KRTAP4-4Q9BYR3 GS1-279B7.1-204ENST00000641809 378 ntBASIC1.34□□□□□ -2.19
KRTAP4-4Q9BYR3 EDIL3-202ENST00000380138 4244 ntTSL 1 (best) BASIC1.34□□□□□ -2.19
KRTAP4-4Q9BYR3 MCFD2-202ENST00000409105 4210 ntAPPRIS P1 TSL 5 BASIC1.34□□□□□ -2.19
KRTAP4-4Q9BYR3 PSMB2-202ENST00000621781 4217 ntTSL 1 (best) BASIC1.34□□□□□ -2.19
KRTAP4-4Q9BYR3 ECT2-216ENST00000540509 4406 ntAPPRIS P2 TSL 5 BASIC1.34□□□□□ -2.19
KRTAP4-4Q9BYR3 KCNJ15-201ENST00000328656 8399 ntAPPRIS P1 TSL 1 (best) BASIC1.34□□□□□ -2.19
KRTAP4-4Q9BYR3 FTO-204ENST00000463855 3056 ntTSL 1 (best) BASIC1.34□□□□□ -2.2
KRTAP4-4Q9BYR3 KIAA0753-207ENST00000572370 3263 ntAPPRIS ALT2 TSL 2 BASIC1.34□□□□□ -2.2
KRTAP4-4Q9BYR3 CNTN5-202ENST00000418526 3679 ntAPPRIS ALT2 TSL 1 (best) BASIC1.34□□□□□ -2.2
KRTAP4-4Q9BYR3 CRB1-202ENST00000367399 3885 ntTSL 1 (best) BASIC1.34□□□□□ -2.2
KRTAP4-4Q9BYR3 PLEKHA1-201ENST00000368988 3872 ntTSL 5 BASIC1.34□□□□□ -2.2
KRTAP4-4Q9BYR3 AC130466.1-201ENST00000636354 4683 ntTSL 5 BASIC1.34□□□□□ -2.2
KRTAP4-4Q9BYR3 CCNT1-205ENST00000618666 6915 ntTSL 2 BASIC1.34□□□□□ -2.2
KRTAP4-4Q9BYR3 PLCE1-201ENST00000371375 6514 ntAPPRIS ALT2 TSL 1 (best) BASIC1.34□□□□□ -2.2
KRTAP4-4Q9BYR3 AL137782.1-201ENST00000563635 4128 ntTSL 5 BASIC1.34□□□□□ -2.2
KRTAP4-4Q9BYR3 CASP10-204ENST00000346817 3926 ntAPPRIS ALT2 TSL 5 BASIC1.34□□□□□ -2.2
KRTAP4-4Q9BYR3 TXNRD1-205ENST00000503506 3930 ntAPPRIS P2 TSL 1 (best) BASIC1.34□□□□□ -2.2
KRTAP4-4Q9BYR3 NUMB-201ENST00000355058 3342 ntAPPRIS ALT1 TSL 5 BASIC1.34□□□□□ -2.2
KRTAP4-4Q9BYR3 SIRT1-202ENST00000403579 3333 ntTSL 1 (best) BASIC1.34□□□□□ -2.2
KRTAP4-4Q9BYR3 PARP4P2-201ENST00000446672 3326 ntBASIC1.34□□□□□ -2.2
KRTAP4-4Q9BYR3 ESRG-201ENST00000583516 3140 ntTSL 1 (best) BASIC1.34□□□□□ -2.2
KRTAP4-4Q9BYR3 LINC02159-202ENST00000518580 2323 ntTSL 2 BASIC1.34□□□□□ -2.2
KRTAP4-4Q9BYR3 MPHOSPH9-220ENST00000606320 6351 ntAPPRIS P2 TSL 5 BASIC1.34□□□□□ -2.2
KRTAP4-4Q9BYR3 ST18-201ENST00000276480 6187 ntAPPRIS P1 TSL 1 (best) BASIC1.34□□□□□ -2.2
KRTAP4-4Q9BYR3 RBPJ-202ENST00000342320 5761 ntAPPRIS P3 TSL 1 (best) BASIC1.34□□□□□ -2.2
KRTAP4-4Q9BYR3 MRO-201ENST00000256425 5166 ntAPPRIS P1 TSL 1 (best) BASIC1.34□□□□□ -2.2
KRTAP4-4Q9BYR3 TRDN-201ENST00000334268 4770 ntAPPRIS P3 TSL 1 (best) BASIC1.34□□□□□ -2.2
KRTAP4-4Q9BYR3 FSTL5-202ENST00000379164 4757 ntAPPRIS ALT1 TSL 1 (best) BASIC1.34□□□□□ -2.2
KRTAP4-4Q9BYR3 PHLDB2-214ENST00000495180 4159 ntTSL 2 BASIC1.34□□□□□ -2.2
KRTAP4-4Q9BYR3 LINC01422-201ENST00000434868 6043 ntTSL 1 (best) BASIC1.34□□□□□ -2.2
KRTAP4-4Q9BYR3 IBTK-206ENST00000503631 3560 ntTSL 1 (best) BASIC1.34□□□□□ -2.2
KRTAP4-4Q9BYR3 STON2-209ENST00000614646 2964 ntAPPRIS ALT2 TSL 5 BASIC1.34□□□□□ -2.2
KRTAP4-4Q9BYR3 OR2T35-202ENST00000641268 2957 ntAPPRIS P1 BASIC1.34□□□□□ -2.2
KRTAP4-4Q9BYR3 SGMS1-AS1-201ENST00000443374 12400 ntTSL 4 BASIC1.34□□□□□ -2.2
KRTAP4-4Q9BYR3 AP4E1-203ENST00000560508 6653 ntTSL 1 (best) BASIC1.34□□□□□ -2.2
KRTAP4-4Q9BYR3 MCCC1-210ENST00000492597 2774 ntTSL 1 (best) BASIC1.34□□□□□ -2.2
KRTAP4-4Q9BYR3 AL731532.1-201ENST00000623972 4236 ntBASIC1.34□□□□□ -2.2
KRTAP4-4Q9BYR3 MFSD8-216ENST00000641147 4009 ntBASIC1.34□□□□□ -2.2
KRTAP4-4Q9BYR3 C9orf84-205ENST00000394779 5060 ntAPPRIS ALT2 TSL 2 BASIC1.34□□□□□ -2.2
KRTAP4-4Q9BYR3 CEP152-203ENST00000399334 5097 ntAPPRIS P3 TSL 1 (best) BASIC1.34□□□□□ -2.2
KRTAP4-4Q9BYR3 KAT14-202ENST00000435364 3618 ntAPPRIS P2 TSL 1 (best) BASIC1.34□□□□□ -2.2
KRTAP4-4Q9BYR3 PCDH15-226ENST00000613657 6329 ntAPPRIS ALT2 TSL 5 BASIC1.34□□□□□ -2.2
KRTAP4-4Q9BYR3 MED12L-206ENST00000474524 10744 ntAPPRIS P2 TSL 1 (best) BASIC1.34□□□□□ -2.2
KRTAP4-4Q9BYR3 SENP8-201ENST00000340912 4281 ntAPPRIS P1 TSL 1 (best) BASIC1.34□□□□□ -2.2
KRTAP4-4Q9BYR3 STK4-207ENST00000499879 6161 ntTSL 1 (best) BASIC1.34□□□□□ -2.2
KRTAP4-4Q9BYR3 CDON-202ENST00000392693 9138 ntAPPRIS ALT2 TSL 1 (best) BASIC1.34□□□□□ -2.2
Retrieved 100 of 98,524 protein–RNA pairs in 125.1 ms