Protein–RNA interactions for Protein: Q9BQ65

USB1, U6 snRNA phosphodiesterase, humanhuman

Known RBP Predictions only

Length 265 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
USB1Q9BQ65 ZNF347-202ENST00000452676 4553 ntAPPRIS ALT2 TSL 2 BASIC4.82□□□□□ -1.64
USB1Q9BQ65 GPATCH2L-214ENST00000621494 12396 ntAPPRIS P1 TSL 2 BASIC4.81□□□□□ -1.64
USB1Q9BQ65 ZNF181-203ENST00000459757 2265 ntAPPRIS ALT2 TSL 1 (best) BASIC4.81□□□□□ -1.64
USB1Q9BQ65 EIF2AK2-201ENST00000233057 10042 ntAPPRIS P1 TSL 2 BASIC4.81□□□□□ -1.64
USB1Q9BQ65 C12orf4-201ENST00000261250 3826 ntAPPRIS P1 TSL 1 (best) BASIC4.81□□□□□ -1.64
USB1Q9BQ65 MLF1-203ENST00000392822 2157 ntTSL 5 BASIC4.81□□□□□ -1.64
USB1Q9BQ65 LIX1-201ENST00000274382 4026 ntAPPRIS P1 TSL 1 (best) BASIC4.81□□□□□ -1.64
USB1Q9BQ65 PUS7L-201ENST00000344862 13593 ntAPPRIS P1 TSL 1 (best) BASIC4.81□□□□□ -1.64
USB1Q9BQ65 ARHGEF38-202ENST00000420470 5454 ntAPPRIS P1 TSL 5 BASIC4.81□□□□□ -1.64
USB1Q9BQ65 MAX-203ENST00000341653 330 ntTSL 2 BASIC4.81□□□□□ -1.64
USB1Q9BQ65 RNA5SP455-201ENST00000365190 119 ntBASIC4.81□□□□□ -1.64
USB1Q9BQ65 RNU6-144P-201ENST00000383951 107 ntBASIC4.81□□□□□ -1.64
USB1Q9BQ65 AC063976.4-201ENST00000421971 163 ntBASIC4.81□□□□□ -1.64
USB1Q9BQ65 GSTA9P-202ENST00000448991 521 ntTSL 3 BASIC4.81□□□□□ -1.64
USB1Q9BQ65 DCLRE1CP1-201ENST00000454630 470 ntBASIC4.81□□□□□ -1.64
USB1Q9BQ65 RN7SL172P-201ENST00000460535 303 ntBASIC4.81□□□□□ -1.64
USB1Q9BQ65 RNU6-772P-201ENST00000516042 105 ntBASIC4.81□□□□□ -1.64
USB1Q9BQ65 AC090142.3-201ENST00000519012 385 ntBASIC4.81□□□□□ -1.64
USB1Q9BQ65 HMGB1P40-201ENST00000525121 540 ntBASIC4.81□□□□□ -1.64
USB1Q9BQ65 AC006199.1-201ENST00000548728 219 ntBASIC4.81□□□□□ -1.64
USB1Q9BQ65 LINC01580-201ENST00000555255 561 ntTSL 4 BASIC4.81□□□□□ -1.64
USB1Q9BQ65 AL031600.2-201ENST00000563223 307 ntTSL 5 BASIC4.81□□□□□ -1.64
USB1Q9BQ65 AC010761.5-201ENST00000579468 287 ntTSL 3 BASIC4.81□□□□□ -1.64
USB1Q9BQ65 AC005702.2-201ENST00000591035 481 ntAPPRIS P1 TSL 3 BASIC4.81□□□□□ -1.64
USB1Q9BQ65 OR7E18P-201ENST00000592589 702 ntBASIC4.81□□□□□ -1.64
USB1Q9BQ65 AC011473.2-201ENST00000596286 240 ntTSL 3 BASIC4.81□□□□□ -1.64
USB1Q9BQ65 AC108081.1-201ENST00000604358 221 ntBASIC4.81□□□□□ -1.64
USB1Q9BQ65 SNORD11B-201ENST00000607707 90 ntBASIC4.81□□□□□ -1.64
USB1Q9BQ65 AC026523.1-201ENST00000617221 490 ntTSL 5 BASIC4.81□□□□□ -1.64
USB1Q9BQ65 RUVBL2-214ENST00000640699 153 ntTSL 5 BASIC4.81□□□□□ -1.64
USB1Q9BQ65 OBSCN-205ENST00000422127 24060 ntTSL 5 BASIC4.81□□□□□ -1.64
USB1Q9BQ65 KIAA1456-203ENST00000524591 9587 ntAPPRIS P1 TSL 5 BASIC4.81□□□□□ -1.64
USB1Q9BQ65 FAM197Y9-201ENST00000451062 2332 ntTSL 5 BASIC4.81□□□□□ -1.64
USB1Q9BQ65 ZNF560-201ENST00000301480 2654 ntAPPRIS P1 TSL 1 (best) BASIC4.81□□□□□ -1.64
USB1Q9BQ65 CENPCP1-201ENST00000533085 2578 ntBASIC4.81□□□□□ -1.64
USB1Q9BQ65 CACNB4-221ENST00000636130 7748 ntTSL 5 BASIC4.81□□□□□ -1.64
USB1Q9BQ65 MTUS1-201ENST00000262102 6160 ntTSL 1 (best) BASIC4.81□□□□□ -1.64
USB1Q9BQ65 ANKRD30A-202ENST00000374660 4762 ntAPPRIS ALT2 TSL 5 BASIC4.81□□□□□ -1.64
USB1Q9BQ65 BMPR2-201ENST00000374574 9683 ntTSL 2 BASIC4.8□□□□□ -1.64
USB1Q9BQ65 ZEB1-208ENST00000542815 3217 ntAPPRIS ALT2 TSL 2 BASIC4.8□□□□□ -1.64
USB1Q9BQ65 SLC44A5-201ENST00000370855 4406 ntAPPRIS P3 TSL 1 (best) BASIC4.8□□□□□ -1.64
USB1Q9BQ65 EPHA4-202ENST00000409854 3454 ntTSL 1 (best) BASIC4.8□□□□□ -1.64
USB1Q9BQ65 AC118758.3-201ENST00000624628 24137 ntTSL 5 BASIC4.8□□□□□ -1.64
USB1Q9BQ65 RASA1-203ENST00000506290 3009 ntAPPRIS ALT2 TSL 2 BASIC4.8□□□□□ -1.64
USB1Q9BQ65 SMC2-AS1-201ENST00000603487 7020 ntTSL 2 BASIC4.8□□□□□ -1.64
USB1Q9BQ65 PTK2-212ENST00000519419 4439 ntTSL 5 BASIC4.8□□□□□ -1.64
USB1Q9BQ65 AP003170.3-201ENST00000399123 158 ntTSL 5 BASIC4.8□□□□□ -1.64
USB1Q9BQ65 AL592291.1-201ENST00000403830 352 ntBASIC4.8□□□□□ -1.64
USB1Q9BQ65 SPATA13-AS1-201ENST00000430733 433 ntTSL 3 BASIC4.8□□□□□ -1.64
USB1Q9BQ65 HMGN2P10-201ENST00000448085 265 ntBASIC4.8□□□□□ -1.64
USB1Q9BQ65 LINC01198-202ENST00000458282 558 ntTSL 5 BASIC4.8□□□□□ -1.64
USB1Q9BQ65 RNA5SP464-201ENST00000516251 108 ntBASIC4.8□□□□□ -1.64
USB1Q9BQ65 RNU6-344P-201ENST00000516635 111 ntBASIC4.8□□□□□ -1.64
USB1Q9BQ65 AC087362.2-201ENST00000529325 256 ntTSL 3 BASIC4.8□□□□□ -1.64
USB1Q9BQ65 POC1B-211ENST00000549504 581 ntTSL 5 BASIC4.8□□□□□ -1.64
USB1Q9BQ65 AC012409.1-201ENST00000560176 358 ntTSL 3 BASIC4.8□□□□□ -1.64
USB1Q9BQ65 MIR4489-201ENST00000578869 62 ntBASIC4.8□□□□□ -1.64
USB1Q9BQ65 MIR3121-201ENST00000579680 77 ntBASIC4.8□□□□□ -1.64
USB1Q9BQ65 AC000068.2-201ENST00000608816 460 ntBASIC4.8□□□□□ -1.64
USB1Q9BQ65 AC018793.1-201ENST00000638166 585 ntAPPRIS P1 BASIC4.8□□□□□ -1.64
USB1Q9BQ65 ZNF92-203ENST00000431504 2947 ntTSL 1 (best) BASIC4.8□□□□□ -1.64
USB1Q9BQ65 ITCH-207ENST00000535650 2940 ntTSL 2 BASIC4.8□□□□□ -1.64
USB1Q9BQ65 A1CF-205ENST00000374001 9221 ntAPPRIS ALT1 TSL 5 BASIC4.8□□□□□ -1.64
USB1Q9BQ65 ABCA13-204ENST00000435803 17184 ntAPPRIS P2 TSL 1 (best) BASIC4.8□□□□□ -1.64
USB1Q9BQ65 ABI1-210ENST00000376170 3362 ntTSL 1 (best) BASIC4.8□□□□□ -1.64
USB1Q9BQ65 ACSM3-201ENST00000289416 2845 ntAPPRIS P1 TSL 1 (best) BASIC4.8□□□□□ -1.64
USB1Q9BQ65 PCDH15-209ENST00000395433 6942 ntTSL 5 BASIC4.8□□□□□ -1.64
USB1Q9BQ65 PLD1-203ENST00000356327 5855 ntAPPRIS P1 TSL 1 (best) BASIC4.8□□□□□ -1.64
USB1Q9BQ65 LDHAL6CP-202ENST00000550738 3224 ntBASIC4.8□□□□□ -1.64
USB1Q9BQ65 ERCC6L-201ENST00000334463 4243 ntAPPRIS P2 TSL 1 (best) BASIC4.8□□□□□ -1.64
USB1Q9BQ65 C4BPAP1-201ENST00000415474 1893 ntBASIC4.79□□□□□ -1.64
USB1Q9BQ65 TOPORSLP1-203ENST00000493279 2871 ntTSL 4 BASIC4.79□□□□□ -1.64
USB1Q9BQ65 SDAD1-203ENST00000395711 2513 ntTSL 2 BASIC4.79□□□□□ -1.64
USB1Q9BQ65 UGT2A1-205ENST00000512704 2519 ntTSL 1 (best) BASIC4.79□□□□□ -1.64
USB1Q9BQ65 PNISR-201ENST00000369239 5112 ntAPPRIS P1 TSL 1 (best) BASIC4.79□□□□□ -1.64
USB1Q9BQ65 ZBTB38-202ENST00000441582 3662 ntAPPRIS P1 TSL 2 BASIC4.79□□□□□ -1.64
USB1Q9BQ65 RNA5SP335-201ENST00000363817 110 ntBASIC4.79□□□□□ -1.64
USB1Q9BQ65 U3.9-201ENST00000363823 204 ntBASIC4.79□□□□□ -1.64
USB1Q9BQ65 SNORA67-201ENST00000384423 137 ntBASIC4.79□□□□□ -1.64
USB1Q9BQ65 SNORA40.5-201ENST00000391061 128 ntBASIC4.79□□□□□ -1.64
USB1Q9BQ65 Y_RNA.584-201ENST00000391090 114 ntBASIC4.79□□□□□ -1.64
USB1Q9BQ65 AL158837.1-201ENST00000417644 452 ntTSL 2 BASIC4.79□□□□□ -1.64
USB1Q9BQ65 CYCSP49-201ENST00000420810 319 ntBASIC4.79□□□□□ -1.64
USB1Q9BQ65 AC108488.2-201ENST00000438485 421 ntAPPRIS P1 TSL 3 BASIC4.79□□□□□ -1.64
USB1Q9BQ65 AP000844.1-201ENST00000446631 577 ntTSL 3 BASIC4.79□□□□□ -1.64
USB1Q9BQ65 RPS26P39-201ENST00000469206 341 ntBASIC4.79□□□□□ -1.64
USB1Q9BQ65 AC108022.1-201ENST00000493466 478 ntBASIC4.79□□□□□ -1.64
USB1Q9BQ65 LINC02230-201ENST00000511174 301 ntTSL 5 BASIC4.79□□□□□ -1.64
USB1Q9BQ65 ACA59.2-201ENST00000517061 156 ntBASIC4.79□□□□□ -1.64
USB1Q9BQ65 AC022081.1-201ENST00000537327 433 ntTSL 2 BASIC4.79□□□□□ -1.64
USB1Q9BQ65 AL139193.1-201ENST00000554967 539 ntTSL 4 BASIC4.79□□□□□ -1.64
USB1Q9BQ65 AC018692.3-201ENST00000623929 123 ntBASIC4.79□□□□□ -1.64
USB1Q9BQ65 AC068205.3-201ENST00000636385 468 ntBASIC4.79□□□□□ -1.64
USB1Q9BQ65 USP15-201ENST00000280377 4748 ntAPPRIS ALT1 TSL 1 (best) BASIC4.79□□□□□ -1.64
USB1Q9BQ65 AC104964.3-201ENST00000606115 2860 ntBASIC4.79□□□□□ -1.64
USB1Q9BQ65 PMS1-215ENST00000447232 2576 ntTSL 2 BASIC4.79□□□□□ -1.64
USB1Q9BQ65 DNAH6-202ENST00000389394 12795 ntAPPRIS P1 TSL 5 BASIC4.79□□□□□ -1.64
USB1Q9BQ65 ATF7IP-209ENST00000536444 8774 ntAPPRIS ALT2 TSL 1 (best) BASIC4.79□□□□□ -1.64
USB1Q9BQ65 NEAT1-202ENST00000501122 22743 ntBASIC4.79□□□□□ -1.64
USB1Q9BQ65 HDX-202ENST00000373177 2924 ntAPPRIS P1 TSL 1 (best) BASIC4.79□□□□□ -1.64
Retrieved 100 of 98,524 protein–RNA pairs in 93.5 ms