Protein–RNA interactions for Protein: Q99453

PHOX2B, Paired mesoderm homeobox protein 2B, humanhuman

Predictions only

Length 314 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PHOX2BQ99453 RNU6-80P-201ENST00000384195 107 ntBASIC5.16□□□□□ -1.58
PHOX2BQ99453 AL355497.1-201ENST00000406262 551 ntBASIC5.16□□□□□ -1.58
PHOX2BQ99453 RN7SL244P-201ENST00000493405 297 ntBASIC5.16□□□□□ -1.58
PHOX2BQ99453 AIG1P1-201ENST00000503376 148 ntBASIC5.16□□□□□ -1.58
PHOX2BQ99453 SNORA31.16-201ENST00000516773 139 ntBASIC5.16□□□□□ -1.58
PHOX2BQ99453 ACA59.2-201ENST00000517061 156 ntBASIC5.16□□□□□ -1.58
PHOX2BQ99453 AC091163.1-201ENST00000524012 605 ntTSL 4 BASIC5.16□□□□□ -1.58
PHOX2BQ99453 AP001880.2-201ENST00000538233 448 ntBASIC5.16□□□□□ -1.58
PHOX2BQ99453 AC105137.2-201ENST00000569073 466 ntBASIC5.16□□□□□ -1.58
PHOX2BQ99453 AC090616.3-201ENST00000582184 217 ntBASIC5.16□□□□□ -1.58
PHOX2BQ99453 RN7SL356P-201ENST00000582228 248 ntBASIC5.16□□□□□ -1.58
PHOX2BQ99453 AC025946.2-201ENST00000603398 234 ntBASIC5.16□□□□□ -1.58
PHOX2BQ99453 RDM1-226ENST00000619828 687 ntTSL 1 (best) BASIC5.16□□□□□ -1.58
PHOX2BQ99453 KDM3B-209ENST00000542866 3634 ntTSL 2 BASIC5.16□□□□□ -1.58
PHOX2BQ99453 SGIP1-203ENST00000371037 7768 ntAPPRIS P3 TSL 1 (best) BASIC5.16□□□□□ -1.58
PHOX2BQ99453 PIAS2-204ENST00000585916 11075 ntAPPRIS P1 TSL 1 (best) BASIC5.16□□□□□ -1.58
PHOX2BQ99453 KBTBD8-201ENST00000417314 4680 ntAPPRIS P1 TSL 2 BASIC5.16□□□□□ -1.58
PHOX2BQ99453 GPX8-201ENST00000296734 3245 ntTSL 1 (best) BASIC5.16□□□□□ -1.58
PHOX2BQ99453 DCLK1-204ENST00000379893 4612 ntTSL 2 BASIC5.16□□□□□ -1.58
PHOX2BQ99453 AC007656.2-201ENST00000624902 4547 ntBASIC5.15□□□□□ -1.58
PHOX2BQ99453 PDE4D-205ENST00000360047 3122 ntTSL 1 (best) BASIC5.15□□□□□ -1.58
PHOX2BQ99453 NLRC4-203ENST00000402280 3355 ntAPPRIS P1 TSL 1 (best) BASIC5.15□□□□□ -1.58
PHOX2BQ99453 GABRG2-224ENST00000640574 3150 ntTSL 5 BASIC5.15□□□□□ -1.58
PHOX2BQ99453 NSD1-202ENST00000354179 12195 ntTSL 5 BASIC5.15□□□□□ -1.58
PHOX2BQ99453 PEAK1-204ENST00000560626 19217 ntAPPRIS P1 TSL 5 BASIC5.15□□□□□ -1.58
PHOX2BQ99453 RNU1-136P-201ENST00000384181 164 ntBASIC5.15□□□□□ -1.59
PHOX2BQ99453 TRAJ38-201ENST00000390499 62 ntAPPRIS P1 BASIC5.15□□□□□ -1.59
PHOX2BQ99453 AL357515.1-201ENST00000402967 542 ntBASIC5.15□□□□□ -1.59
PHOX2BQ99453 AC090617.2-201ENST00000433167 404 ntTSL 3 BASIC5.15□□□□□ -1.59
PHOX2BQ99453 VDAC1P3-201ENST00000434069 851 ntBASIC5.15□□□□□ -1.59
PHOX2BQ99453 U8.19-201ENST00000459095 133 ntBASIC5.15□□□□□ -1.59
PHOX2BQ99453 AC011276.1-201ENST00000469688 323 ntBASIC5.15□□□□□ -1.59
PHOX2BQ99453 AC078817.1-201ENST00000492623 435 ntBASIC5.15□□□□□ -1.59
PHOX2BQ99453 ARHGEF3-AS1-202ENST00000495939 336 ntTSL 3 BASIC5.15□□□□□ -1.59
PHOX2BQ99453 ENPP7P11-201ENST00000505915 627 ntBASIC5.15□□□□□ -1.59
PHOX2BQ99453 RNA5SP272-201ENST00000516095 111 ntBASIC5.15□□□□□ -1.59
PHOX2BQ99453 RNU6-581P-201ENST00000516214 105 ntBASIC5.15□□□□□ -1.59
PHOX2BQ99453 TBCA-207ENST00000520039 157 ntTSL 3 BASIC5.15□□□□□ -1.59
PHOX2BQ99453 AC011602.1-201ENST00000546484 331 ntBASIC5.15□□□□□ -1.59
PHOX2BQ99453 AC007493.1-202ENST00000567899 517 ntTSL 2 BASIC5.15□□□□□ -1.59
PHOX2BQ99453 AC007922.3-201ENST00000581648 543 ntTSL 3 BASIC5.15□□□□□ -1.59
PHOX2BQ99453 LINC01533-202ENST00000588694 632 ntTSL 2 BASIC5.15□□□□□ -1.59
PHOX2BQ99453 AC006272.2-201ENST00000594725 163 ntBASIC5.15□□□□□ -1.59
PHOX2BQ99453 LINC00993-204ENST00000606476 500 ntTSL 5 BASIC5.15□□□□□ -1.59
PHOX2BQ99453 Y_RNA.802-201ENST00000614892 130 ntBASIC5.15□□□□□ -1.59
PHOX2BQ99453 LINC01232-203ENST00000625369 576 ntTSL 4 BASIC5.15□□□□□ -1.59
PHOX2BQ99453 DTHD1-202ENST00000456874 3365 ntAPPRIS P1 TSL 1 (best) BASIC5.15□□□□□ -1.59
PHOX2BQ99453 PRTG-201ENST00000389286 11967 ntAPPRIS P1 TSL 1 (best) BASIC5.15□□□□□ -1.59
PHOX2BQ99453 NLRP11-202ENST00000589824 3231 ntAPPRIS ALT2 TSL 5 BASIC5.15□□□□□ -1.59
PHOX2BQ99453 AC010329.5-201ENST00000623497 2174 ntBASIC5.15□□□□□ -1.59
PHOX2BQ99453 FAT3-201ENST00000409404 19030 ntAPPRIS P1 TSL 5 BASIC5.15□□□□□ -1.59
PHOX2BQ99453 LINS1-201ENST00000314742 4821 ntAPPRIS P1 TSL 5 BASIC5.14□□□□□ -1.59
PHOX2BQ99453 GHR-210ENST00000615111 4814 ntAPPRIS P1 TSL 5 BASIC5.14□□□□□ -1.59
PHOX2BQ99453 DYNC1I2-201ENST00000340296 2589 ntAPPRIS P4 TSL 1 (best) BASIC5.14□□□□□ -1.59
PHOX2BQ99453 MUC15-201ENST00000281268 2968 ntTSL 5 BASIC5.14□□□□□ -1.59
PHOX2BQ99453 MAP3K19-203ENST00000375845 4369 ntAPPRIS P3 TSL 1 (best) BASIC5.14□□□□□ -1.59
PHOX2BQ99453 SFT2D2-201ENST00000271375 11040 ntAPPRIS P1 TSL 1 (best) BASIC5.14□□□□□ -1.59
PHOX2BQ99453 SCN1A-201ENST00000303395 8533 ntAPPRIS ALT1 TSL 5 BASIC5.14□□□□□ -1.59
PHOX2BQ99453 UBE2D3-233ENST00000618836 3472 ntAPPRIS ALT1 TSL 5 BASIC5.14□□□□□ -1.59
PHOX2BQ99453 ZNF678-201ENST00000343776 8556 ntAPPRIS P1 TSL 1 (best) BASIC5.14□□□□□ -1.59
PHOX2BQ99453 MT-ATP8-201ENST00000361851 207 ntAPPRIS P1 BASIC5.14□□□□□ -1.59
PHOX2BQ99453 RNU6-727P-201ENST00000363592 107 ntBASIC5.14□□□□□ -1.59
PHOX2BQ99453 Y_RNA.293-201ENST00000364908 93 ntBASIC5.14□□□□□ -1.59
PHOX2BQ99453 RNU6-44P-201ENST00000384045 107 ntBASIC5.14□□□□□ -1.59
PHOX2BQ99453 MIR1182-201ENST00000408363 97 ntBASIC5.14□□□□□ -1.59
PHOX2BQ99453 IGKV3D-7-201ENST00000443397 384 ntAPPRIS P1 BASIC5.14□□□□□ -1.59
PHOX2BQ99453 RPS27P26-201ENST00000494583 239 ntBASIC5.14□□□□□ -1.59
PHOX2BQ99453 RNU6-344P-201ENST00000516635 111 ntBASIC5.14□□□□□ -1.59
PHOX2BQ99453 RNU6-107P-201ENST00000516643 102 ntBASIC5.14□□□□□ -1.59
PHOX2BQ99453 MAPK1-204ENST00000544786 951 ntTSL 1 (best) BASIC5.14□□□□□ -1.59
PHOX2BQ99453 POC1B-211ENST00000549504 581 ntTSL 5 BASIC5.14□□□□□ -1.59
PHOX2BQ99453 MIR3124-201ENST00000582636 67 ntBASIC5.14□□□□□ -1.59
PHOX2BQ99453 AL161756.2-201ENST00000604597 246 ntBASIC5.14□□□□□ -1.59
PHOX2BQ99453 AC243585.1-201ENST00000617867 607 ntTSL 3 BASIC5.14□□□□□ -1.59
PHOX2BQ99453 MIR3199-2-201ENST00000636243 86 ntBASIC5.14□□□□□ -1.59
PHOX2BQ99453 CFL2-201ENST00000298159 6747 ntAPPRIS P1 TSL 1 (best) BASIC5.14□□□□□ -1.59
PHOX2BQ99453 CACNB4-221ENST00000636130 7748 ntTSL 5 BASIC5.14□□□□□ -1.59
PHOX2BQ99453 EDIL3-202ENST00000380138 4244 ntTSL 1 (best) BASIC5.14□□□□□ -1.59
PHOX2BQ99453 HERC4-205ENST00000412272 4211 ntTSL 1 (best) BASIC5.14□□□□□ -1.59
PHOX2BQ99453 BCHE-201ENST00000264381 2454 ntAPPRIS P1 TSL 1 (best) BASIC5.14□□□□□ -1.59
PHOX2BQ99453 MYBPC1-202ENST00000361685 3871 ntAPPRIS ALT2 TSL 1 (best) BASIC5.13□□□□□ -1.59
PHOX2BQ99453 AP002512.4-201ENST00000641310 4672 ntAPPRIS P1 BASIC5.13□□□□□ -1.59
PHOX2BQ99453 LINC02389-201ENST00000535058 3546 ntTSL 2 BASIC5.13□□□□□ -1.59
PHOX2BQ99453 CALCRL-203ENST00000410068 1984 ntAPPRIS P1 TSL 2 BASIC5.13□□□□□ -1.59
PHOX2BQ99453 CSPP1-201ENST00000262210 4367 ntAPPRIS P3 TSL 1 (best) BASIC5.13□□□□□ -1.59
PHOX2BQ99453 AC104793.1-201ENST00000508189 2840 ntTSL 2 BASIC5.13□□□□□ -1.59
PHOX2BQ99453 RN7SKP280-201ENST00000364196 304 ntBASIC5.13□□□□□ -1.59
PHOX2BQ99453 Y_RNA.218-201ENST00000364218 104 ntBASIC5.13□□□□□ -1.59
PHOX2BQ99453 RNU6-1325P-201ENST00000364905 105 ntBASIC5.13□□□□□ -1.59
PHOX2BQ99453 RNA5SP189-201ENST00000364920 115 ntBASIC5.13□□□□□ -1.59
PHOX2BQ99453 RPL21P17-201ENST00000397467 475 ntBASIC5.13□□□□□ -1.59
PHOX2BQ99453 AL354726.1-201ENST00000411981 402 ntTSL 2 BASIC5.13□□□□□ -1.59
PHOX2BQ99453 AL358234.1-201ENST00000421132 273 ntTSL 5 BASIC5.13□□□□□ -1.59
PHOX2BQ99453 YWHAEP4-201ENST00000505390 198 ntBASIC5.13□□□□□ -1.59
PHOX2BQ99453 Vault.1-201ENST00000516474 102 ntBASIC5.13□□□□□ -1.59
PHOX2BQ99453 RNA5SP43-201ENST00000516559 110 ntBASIC5.13□□□□□ -1.59
PHOX2BQ99453 AP002001.1-203ENST00000534002 267 ntBASIC5.13□□□□□ -1.59
PHOX2BQ99453 AC109810.1-201ENST00000534066 224 ntBASIC5.13□□□□□ -1.59
PHOX2BQ99453 MIR4472-2-201ENST00000582069 67 ntBASIC5.13□□□□□ -1.59
PHOX2BQ99453 SASS6-201ENST00000287482 3880 ntAPPRIS P1 TSL 1 (best) BASIC5.13□□□□□ -1.59
Retrieved 100 of 98,524 protein–RNA pairs in 10.9 ms