Protein–RNA interactions for Protein: Q8TAU0

NKX2-3, Homeobox protein Nkx-2.3, humanhuman

Predictions only

Length 364 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NKX2-3Q8TAU0 MIR34A-201ENST00000385130 110 ntBASIC5.44□□□□□ -1.54
NKX2-3Q8TAU0 RNA5SP171-201ENST00000391071 115 ntBASIC5.44□□□□□ -1.54
NKX2-3Q8TAU0 MAP2-205ENST00000392194 5303 ntTSL 1 (best) BASIC5.44□□□□□ -1.54
NKX2-3Q8TAU0 AL078601.2-201ENST00000429444 474 ntTSL 2 BASIC5.44□□□□□ -1.54
NKX2-3Q8TAU0 ZNF28-204ENST00000457749 4556 ntAPPRIS P1 TSL 1 (best) BASIC5.44□□□□□ -1.54
NKX2-3Q8TAU0 SMILR-201ENST00000533992 553 ntTSL 4 BASIC5.44□□□□□ -1.54
NKX2-3Q8TAU0 AC116096.1-201ENST00000566804 2314 ntBASIC5.44□□□□□ -1.54
NKX2-3Q8TAU0 MIR3936-201ENST00000584304 110 ntBASIC5.44□□□□□ -1.54
NKX2-3Q8TAU0 AF127577.6-201ENST00000623352 2191 ntBASIC5.44□□□□□ -1.54
NKX2-3Q8TAU0 AC093535.2-201ENST00000624769 2326 ntBASIC5.44□□□□□ -1.54
NKX2-3Q8TAU0 ERMN-201ENST00000397283 3760 ntTSL 2 BASIC5.44□□□□□ -1.54
NKX2-3Q8TAU0 DEPDC1-202ENST00000456315 5331 ntTSL 1 (best) BASIC5.44□□□□□ -1.54
NKX2-3Q8TAU0 FAP-214ENST00000627638 2569 ntAPPRIS ALT1 TSL 5 BASIC5.44□□□□□ -1.54
NKX2-3Q8TAU0 DSG2-AS1-202ENST00000583706 2024 ntTSL 5 BASIC5.43□□□□□ -1.54
NKX2-3Q8TAU0 NLRC4-203ENST00000402280 3355 ntAPPRIS P1 TSL 1 (best) BASIC5.43□□□□□ -1.54
NKX2-3Q8TAU0 DSE-204ENST00000452085 10586 ntAPPRIS P1 TSL 1 (best) BASIC5.43□□□□□ -1.54
NKX2-3Q8TAU0 ARHGAP42-201ENST00000298815 4752 ntAPPRIS P1 TSL 5 BASIC5.43□□□□□ -1.54
NKX2-3Q8TAU0 RNU6-1167P-201ENST00000363227 94 ntBASIC5.43□□□□□ -1.54
NKX2-3Q8TAU0 SNORA36C-201ENST00000384289 132 ntBASIC5.43□□□□□ -1.54
NKX2-3Q8TAU0 SNORA70E-201ENST00000384492 135 ntBASIC5.43□□□□□ -1.54
NKX2-3Q8TAU0 SNORA40.5-201ENST00000391061 128 ntBASIC5.43□□□□□ -1.54
NKX2-3Q8TAU0 TRAPPC2P9-201ENST00000434556 343 ntBASIC5.43□□□□□ -1.54
NKX2-3Q8TAU0 AL139383.1-203ENST00000445227 420 ntTSL 3 BASIC5.43□□□□□ -1.54
NKX2-3Q8TAU0 BTF3L4P4-201ENST00000506381 449 ntBASIC5.43□□□□□ -1.54
NKX2-3Q8TAU0 Y_RNA.677-201ENST00000516401 85 ntBASIC5.43□□□□□ -1.54
NKX2-3Q8TAU0 SNORA31.9-201ENST00000516429 84 ntBASIC5.43□□□□□ -1.54
NKX2-3Q8TAU0 RNU6-966P-201ENST00000516479 104 ntBASIC5.43□□□□□ -1.54
NKX2-3Q8TAU0 RNU6-1198P-201ENST00000516904 67 ntBASIC5.43□□□□□ -1.54
NKX2-3Q8TAU0 IGKV3OR22-2-201ENST00000517943 313 ntBASIC5.43□□□□□ -1.54
NKX2-3Q8TAU0 UTP23-205ENST00000520733 369 ntTSL 3 BASIC5.43□□□□□ -1.54
NKX2-3Q8TAU0 AP003327.1-201ENST00000529684 127 ntBASIC5.43□□□□□ -1.54
NKX2-3Q8TAU0 AL161713.1-201ENST00000555538 145 ntBASIC5.43□□□□□ -1.54
NKX2-3Q8TAU0 LINC01570-201ENST00000561572 434 ntTSL 3 BASIC5.43□□□□□ -1.54
NKX2-3Q8TAU0 AK9-203ENST00000368948 2478 ntTSL 5 BASIC5.43□□□□□ -1.54
NKX2-3Q8TAU0 MBNL1-203ENST00000324196 5225 ntTSL 5 BASIC5.43□□□□□ -1.54
NKX2-3Q8TAU0 OR5AN1-203ENST00000641998 7647 ntAPPRIS P1 BASIC5.43□□□□□ -1.54
NKX2-3Q8TAU0 SRP72P2-201ENST00000344851 1979 ntBASIC5.43□□□□□ -1.54
NKX2-3Q8TAU0 MYBPC1-204ENST00000452455 3861 ntAPPRIS ALT2 TSL 2 BASIC5.43□□□□□ -1.54
NKX2-3Q8TAU0 ZBTB38-220ENST00000514251 7683 ntAPPRIS P1 TSL 2 BASIC5.43□□□□□ -1.54
NKX2-3Q8TAU0 FYB1-201ENST00000351578 4750 ntAPPRIS P3 TSL 1 (best) BASIC5.43□□□□□ -1.54
NKX2-3Q8TAU0 RAB23-201ENST00000317483 2546 ntAPPRIS P1 TSL 1 (best) BASIC5.43□□□□□ -1.54
NKX2-3Q8TAU0 SEMG2-201ENST00000372769 2051 ntAPPRIS P1 TSL 1 (best) BASIC5.43□□□□□ -1.54
NKX2-3Q8TAU0 ARHGAP42P3-201ENST00000443989 2508 ntBASIC5.42□□□□□ -1.54
NKX2-3Q8TAU0 AL360270.1-201ENST00000440689 2359 ntTSL 2 BASIC5.42□□□□□ -1.54
NKX2-3Q8TAU0 PWRN2-202ENST00000567246 4295 ntTSL 1 (best) BASIC5.42□□□□□ -1.54
NKX2-3Q8TAU0 PCAT14-202ENST00000627127 3935 ntBASIC5.42□□□□□ -1.54
NKX2-3Q8TAU0 ING3-201ENST00000315870 3777 ntAPPRIS P1 TSL 1 (best) BASIC5.42□□□□□ -1.54
NKX2-3Q8TAU0 GYPA-201ENST00000324022 751 ntAPPRIS ALT2 TSL 1 (best) BASIC5.42□□□□□ -1.54
NKX2-3Q8TAU0 SNORA26.2-201ENST00000390922 122 ntBASIC5.42□□□□□ -1.54
NKX2-3Q8TAU0 RNA5SP44-201ENST00000410446 133 ntBASIC5.42□□□□□ -1.54
NKX2-3Q8TAU0 RNY4P29-201ENST00000410801 97 ntBASIC5.42□□□□□ -1.54
NKX2-3Q8TAU0 AC006461.1-201ENST00000412637 326 ntBASIC5.42□□□□□ -1.54
NKX2-3Q8TAU0 AC084149.1-201ENST00000437233 284 ntTSL 5 BASIC5.42□□□□□ -1.54
NKX2-3Q8TAU0 H2AFZP5-201ENST00000446960 382 ntBASIC5.42□□□□□ -1.54
NKX2-3Q8TAU0 AC012158.1-204ENST00000483430 465 ntBASIC5.42□□□□□ -1.54
NKX2-3Q8TAU0 PPP2R2B-IT1-201ENST00000505921 447 ntTSL 3 BASIC5.42□□□□□ -1.54
NKX2-3Q8TAU0 CYCSP23-201ENST00000519781 313 ntBASIC5.42□□□□□ -1.54
NKX2-3Q8TAU0 AC108081.1-201ENST00000604358 221 ntBASIC5.42□□□□□ -1.54
NKX2-3Q8TAU0 AL161798.1-201ENST00000604630 131 ntBASIC5.42□□□□□ -1.54
NKX2-3Q8TAU0 MIR6844-201ENST00000637122 62 ntBASIC5.42□□□□□ -1.54
NKX2-3Q8TAU0 MYBPC1-202ENST00000361685 3871 ntAPPRIS ALT2 TSL 1 (best) BASIC5.42□□□□□ -1.54
NKX2-3Q8TAU0 A1CF-205ENST00000374001 9221 ntAPPRIS ALT1 TSL 5 BASIC5.42□□□□□ -1.54
NKX2-3Q8TAU0 U2SURP-208ENST00000473835 7276 ntAPPRIS P1 TSL 1 (best) BASIC5.42□□□□□ -1.54
NKX2-3Q8TAU0 ZFRP1-201ENST00000457579 2970 ntBASIC5.42□□□□□ -1.54
NKX2-3Q8TAU0 PRKACB-208ENST00000394839 4200 ntTSL 2 BASIC5.42□□□□□ -1.54
NKX2-3Q8TAU0 DNAH8-201ENST00000327475 14360 ntAPPRIS P2 TSL 5 BASIC5.42□□□□□ -1.54
NKX2-3Q8TAU0 AC006971.1-201ENST00000407916 4486 ntBASIC5.42□□□□□ -1.54
NKX2-3Q8TAU0 LINC02532-209ENST00000602934 2464 ntTSL 2 BASIC5.41□□□□□ -1.54
NKX2-3Q8TAU0 PIGN-245ENST00000640252 7924 ntAPPRIS P1 TSL 1 (best) BASIC5.41□□□□□ -1.54
NKX2-3Q8TAU0 PLEKHG7-203ENST00000638590 3267 ntAPPRIS P1 TSL 2 BASIC5.41□□□□□ -1.54
NKX2-3Q8TAU0 ANKRD30BP1-201ENST00000451052 2186 ntBASIC5.41□□□□□ -1.54
NKX2-3Q8TAU0 MATR3-228ENST00000620916 3134 ntTSL 5 BASIC5.41□□□□□ -1.54
NKX2-3Q8TAU0 MT-ATP8-201ENST00000361851 207 ntAPPRIS P1 BASIC5.41□□□□□ -1.54
NKX2-3Q8TAU0 snoU2_19.4-201ENST00000364329 80 ntBASIC5.41□□□□□ -1.54
NKX2-3Q8TAU0 Y_RNA.251-201ENST00000364551 99 ntBASIC5.41□□□□□ -1.54
NKX2-3Q8TAU0 MIR626-201ENST00000385032 94 ntBASIC5.41□□□□□ -1.54
NKX2-3Q8TAU0 RN7SKP267-201ENST00000410381 285 ntBASIC5.41□□□□□ -1.54
NKX2-3Q8TAU0 Y_RNA.595-201ENST00000410403 105 ntBASIC5.41□□□□□ -1.54
NKX2-3Q8TAU0 RNA5SP446-201ENST00000515955 82 ntBASIC5.41□□□□□ -1.54
NKX2-3Q8TAU0 MRPL49P2-201ENST00000521066 465 ntBASIC5.41□□□□□ -1.54
NKX2-3Q8TAU0 CYCSP29-201ENST00000533731 318 ntBASIC5.41□□□□□ -1.54
NKX2-3Q8TAU0 ZNF192P1-203ENST00000565888 810 ntBASIC5.41□□□□□ -1.54
NKX2-3Q8TAU0 AC006130.2-201ENST00000586202 326 ntBASIC5.41□□□□□ -1.54
NKX2-3Q8TAU0 IPO5P1-202ENST00000600039 287 ntBASIC5.41□□□□□ -1.54
NKX2-3Q8TAU0 AC091979.2-201ENST00000607514 214 ntBASIC5.41□□□□□ -1.54
NKX2-3Q8TAU0 AC114781.5-201ENST00000615297 108 ntBASIC5.41□□□□□ -1.54
NKX2-3Q8TAU0 AC092628.2-201ENST00000622492 339 ntBASIC5.41□□□□□ -1.54
NKX2-3Q8TAU0 AL773545.4-201ENST00000637262 310 ntBASIC5.41□□□□□ -1.54
NKX2-3Q8TAU0 AL513478.4-201ENST00000641636 310 ntBASIC5.41□□□□□ -1.54
NKX2-3Q8TAU0 AL022311.1-201ENST00000623726 19416 ntBASIC5.41□□□□□ -1.54
NKX2-3Q8TAU0 OR2L3-201ENST00000359959 2792 ntAPPRIS P1 BASIC5.41□□□□□ -1.54
NKX2-3Q8TAU0 USP29-202ENST00000598197 3284 ntAPPRIS P1 BASIC5.41□□□□□ -1.54
NKX2-3Q8TAU0 CYSLTR1-203ENST00000614798 2681 ntAPPRIS P1 TSL 1 (best) BASIC5.41□□□□□ -1.54
NKX2-3Q8TAU0 AL592437.2-201ENST00000421655 2434 ntBASIC5.4□□□□□ -1.54
NKX2-3Q8TAU0 LINC01376-202ENST00000424895 1949 ntTSL 2 BASIC5.4□□□□□ -1.54
NKX2-3Q8TAU0 EIF2AK2-201ENST00000233057 10042 ntAPPRIS P1 TSL 2 BASIC5.4□□□□□ -1.54
NKX2-3Q8TAU0 SLFN13-201ENST00000285013 8469 ntAPPRIS P1 TSL 1 (best) BASIC5.4□□□□□ -1.54
NKX2-3Q8TAU0 C8orf34-202ENST00000337103 3652 ntAPPRIS ALT2 TSL 1 (best) BASIC5.4□□□□□ -1.54
NKX2-3Q8TAU0 CPNE8-202ENST00000360449 1757 ntAPPRIS ALT2 TSL 2 BASIC5.4□□□□□ -1.54
NKX2-3Q8TAU0 FAR2-203ENST00000547116 1787 ntTSL 2 BASIC5.4□□□□□ -1.54
Retrieved 100 of 98,524 protein–RNA pairs in 103.1 ms