Protein–RNA interactions for Protein: Q8TAP4

LMO3, LIM domain only protein 3, humanhuman

Predictions only

Length 145 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LMO3Q8TAP4 uc_338.22-201ENST00000622722 187 ntBASIC3.02□□□□□ -1.93
LMO3Q8TAP4 AC092442.1-201ENST00000636216 138 ntAPPRIS P1 TSL 5 BASIC3.02□□□□□ -1.93
LMO3Q8TAP4 MIR4275-201ENST00000636486 87 ntBASIC3.02□□□□□ -1.93
LMO3Q8TAP4 LRRC39-201ENST00000342895 1881 ntAPPRIS P1 TSL 5 BASIC3.02□□□□□ -1.93
LMO3Q8TAP4 AL136964.1-201ENST00000622038 2990 ntBASIC3.02□□□□□ -1.93
LMO3Q8TAP4 RGS21-201ENST00000417209 1794 ntAPPRIS P1 TSL 1 (best) BASIC3.02□□□□□ -1.93
LMO3Q8TAP4 CBLL1-201ENST00000222597 2003 ntAPPRIS ALT1 TSL 1 (best) BASIC3.02□□□□□ -1.93
LMO3Q8TAP4 CREBRF-201ENST00000296953 7778 ntAPPRIS P1 TSL 1 (best) BASIC3.02□□□□□ -1.93
LMO3Q8TAP4 AC005183.1-201ENST00000603687 1979 ntBASIC3.01□□□□□ -1.93
LMO3Q8TAP4 MCF2-208ENST00000519895 3346 ntAPPRIS ALT2 TSL 2 BASIC3.01□□□□□ -1.93
LMO3Q8TAP4 MINDY3-202ENST00000378036 2452 ntTSL 2 BASIC3.01□□□□□ -1.93
LMO3Q8TAP4 AC010733.2-201ENST00000589496 5702 ntBASIC3.01□□□□□ -1.93
LMO3Q8TAP4 OXR1-205ENST00000442977 2956 ntTSL 2 BASIC3.01□□□□□ -1.93
LMO3Q8TAP4 Y_RNA.146-201ENST00000363549 102 ntBASIC3.01□□□□□ -1.93
LMO3Q8TAP4 RNU6-1188P-201ENST00000363795 107 ntBASIC3.01□□□□□ -1.93
LMO3Q8TAP4 RNU1-140P-201ENST00000365040 165 ntBASIC3.01□□□□□ -1.93
LMO3Q8TAP4 RNU6-76P-201ENST00000384060 104 ntBASIC3.01□□□□□ -1.93
LMO3Q8TAP4 RNA5SP219-201ENST00000390940 113 ntBASIC3.01□□□□□ -1.93
LMO3Q8TAP4 MIR450B-201ENST00000401182 78 ntBASIC3.01□□□□□ -1.93
LMO3Q8TAP4 EIF4EBP2P3-201ENST00000403144 334 ntBASIC3.01□□□□□ -1.93
LMO3Q8TAP4 AC093911.1-201ENST00000419129 552 ntTSL 4 BASIC3.01□□□□□ -1.93
LMO3Q8TAP4 PMCHL1-202ENST00000423102 261 ntBASIC3.01□□□□□ -1.93
LMO3Q8TAP4 RPL21P40-201ENST00000428586 483 ntBASIC3.01□□□□□ -1.93
LMO3Q8TAP4 AL591704.1-201ENST00000432574 275 ntBASIC3.01□□□□□ -1.93
LMO3Q8TAP4 AL135938.1-201ENST00000443141 297 ntBASIC3.01□□□□□ -1.93
LMO3Q8TAP4 NEFMP1-201ENST00000443423 1006 ntBASIC3.01□□□□□ -1.93
LMO3Q8TAP4 AL353780.1-201ENST00000455583 458 ntTSL 2 BASIC3.01□□□□□ -1.93
LMO3Q8TAP4 RNU7-167P-201ENST00000459160 62 ntBASIC3.01□□□□□ -1.93
LMO3Q8TAP4 AC103975.1-201ENST00000482506 483 ntBASIC3.01□□□□□ -1.93
LMO3Q8TAP4 UBE2Q2P9-201ENST00000490086 202 ntBASIC3.01□□□□□ -1.93
LMO3Q8TAP4 RPS27P27-201ENST00000498779 255 ntBASIC3.01□□□□□ -1.93
LMO3Q8TAP4 AC096736.2-201ENST00000507972 175 ntTSL 3 BASIC3.01□□□□□ -1.93
LMO3Q8TAP4 AC093303.1-201ENST00000514549 295 ntBASIC3.01□□□□□ -1.93
LMO3Q8TAP4 RNU2-69P-201ENST00000516061 100 ntBASIC3.01□□□□□ -1.93
LMO3Q8TAP4 SNORA14.1-201ENST00000516113 141 ntBASIC3.01□□□□□ -1.93
LMO3Q8TAP4 RNU6-273P-201ENST00000516937 96 ntBASIC3.01□□□□□ -1.93
LMO3Q8TAP4 RN7SKP258-201ENST00000517151 304 ntBASIC3.01□□□□□ -1.93
LMO3Q8TAP4 LINC02055-204ENST00000521034 432 ntTSL 5 BASIC3.01□□□□□ -1.93
LMO3Q8TAP4 AC011611.2-201ENST00000549888 358 ntTSL 3 BASIC3.01□□□□□ -1.93
LMO3Q8TAP4 MIR3941-201ENST00000582572 103 ntBASIC3.01□□□□□ -1.93
LMO3Q8TAP4 MIR5690-201ENST00000583739 73 ntBASIC3.01□□□□□ -1.93
LMO3Q8TAP4 AL161756.2-201ENST00000604597 246 ntBASIC3.01□□□□□ -1.93
LMO3Q8TAP4 AP000942.4-201ENST00000604811 241 ntBASIC3.01□□□□□ -1.93
LMO3Q8TAP4 AC007619.2-201ENST00000605743 379 ntBASIC3.01□□□□□ -1.93
LMO3Q8TAP4 AC093732.2-201ENST00000607950 274 ntBASIC3.01□□□□□ -1.93
LMO3Q8TAP4 AC244093.3-201ENST00000615419 411 ntTSL 3 BASIC3.01□□□□□ -1.93
LMO3Q8TAP4 LINC01378-205ENST00000615833 158 ntTSL 5 BASIC3.01□□□□□ -1.93
LMO3Q8TAP4 U73479.1-201ENST00000618062 168 ntBASIC3.01□□□□□ -1.93
LMO3Q8TAP4 U6.98-201ENST00000637157 84 ntBASIC3.01□□□□□ -1.93
LMO3Q8TAP4 HSPA8P4-201ENST00000511877 1920 ntBASIC3.01□□□□□ -1.93
LMO3Q8TAP4 POLK-217ENST00000515295 1438 ntTSL 1 (best) BASIC3.01□□□□□ -1.93
LMO3Q8TAP4 ZNF519P1-201ENST00000449011 1626 ntBASIC3.01□□□□□ -1.93
LMO3Q8TAP4 IGSF11-AS1-201ENST00000477009 1604 ntTSL 2 BASIC3.01□□□□□ -1.93
LMO3Q8TAP4 CYLC2-204ENST00000612124 1817 ntAPPRIS P1 TSL 1 (best) BASIC3□□□□□ -1.93
LMO3Q8TAP4 XRCC4-202ENST00000338635 1579 ntAPPRIS P4 TSL 2 BASIC3□□□□□ -1.93
LMO3Q8TAP4 RNF128-202ENST00000324342 2654 ntTSL 1 (best) BASIC3□□□□□ -1.93
LMO3Q8TAP4 ARHGAP11A-207ENST00000565905 3318 ntTSL 2 BASIC3□□□□□ -1.93
LMO3Q8TAP4 CCDC168-201ENST00000322527 21466 ntAPPRIS P1 TSL 3 BASIC3□□□□□ -1.93
LMO3Q8TAP4 Y_RNA.31-201ENST00000362574 102 ntBASIC3□□□□□ -1.93
LMO3Q8TAP4 RNU6-356P-201ENST00000384140 107 ntBASIC3□□□□□ -1.93
LMO3Q8TAP4 RNU6-434P-201ENST00000384376 107 ntBASIC3□□□□□ -1.93
LMO3Q8TAP4 RNU6-882P-201ENST00000391025 103 ntBASIC3□□□□□ -1.93
LMO3Q8TAP4 RNU6-370P-201ENST00000411008 104 ntBASIC3□□□□□ -1.93
LMO3Q8TAP4 RNU6-1304P-201ENST00000411374 106 ntBASIC3□□□□□ -1.93
LMO3Q8TAP4 GPM6BP2-201ENST00000432046 144 ntBASIC3□□□□□ -1.93
LMO3Q8TAP4 AC004837.2-201ENST00000435766 731 ntTSL 3 BASIC3□□□□□ -1.93
LMO3Q8TAP4 AC020743.3-201ENST00000440351 360 ntTSL 3 BASIC3□□□□□ -1.93
LMO3Q8TAP4 U91324.1-201ENST00000442864 447 ntTSL 5 BASIC3□□□□□ -1.93
LMO3Q8TAP4 LINC01683-201ENST00000443479 412 ntTSL 3 BASIC3□□□□□ -1.93
LMO3Q8TAP4 AL137792.2-201ENST00000443484 235 ntBASIC3□□□□□ -1.93
LMO3Q8TAP4 LINC01710-201ENST00000446002 390 ntTSL 5 BASIC3□□□□□ -1.93
LMO3Q8TAP4 GPM6BP1-201ENST00000446387 144 ntBASIC3□□□□□ -1.93
LMO3Q8TAP4 AC104058.1-201ENST00000448028 297 ntBASIC3□□□□□ -1.93
LMO3Q8TAP4 AC008526.1-201ENST00000509149 338 ntBASIC3□□□□□ -1.93
LMO3Q8TAP4 RPL39P5-202ENST00000512505 151 ntBASIC3□□□□□ -1.93
LMO3Q8TAP4 AC104136.1-201ENST00000512969 394 ntBASIC3□□□□□ -1.93
LMO3Q8TAP4 RNU6-390P-201ENST00000516259 103 ntBASIC3□□□□□ -1.93
LMO3Q8TAP4 SNORA70.24-201ENST00000517233 118 ntBASIC3□□□□□ -1.93
LMO3Q8TAP4 AC096558.2-201ENST00000546678 506 ntTSL 3 BASIC3□□□□□ -1.93
LMO3Q8TAP4 APAF1-207ENST00000547743 651 ntTSL 3 BASIC3□□□□□ -1.93
LMO3Q8TAP4 AC079600.2-201ENST00000550076 130 ntBASIC3□□□□□ -1.93
LMO3Q8TAP4 AC012182.1-201ENST00000570133 895 ntBASIC3□□□□□ -1.93
LMO3Q8TAP4 AC138761.3-201ENST00000579993 334 ntBASIC3□□□□□ -1.93
LMO3Q8TAP4 MIR3200-201ENST00000580767 85 ntBASIC3□□□□□ -1.93
LMO3Q8TAP4 MIR3605-201ENST00000583214 100 ntBASIC3□□□□□ -1.93
LMO3Q8TAP4 MIR5692C1-201ENST00000585309 91 ntBASIC3□□□□□ -1.93
LMO3Q8TAP4 XIAPP1-201ENST00000603162 600 ntBASIC3□□□□□ -1.93
LMO3Q8TAP4 MIR4458HG-202ENST00000605918 1057 ntTSL 1 (best) BASIC3□□□□□ -1.93
LMO3Q8TAP4 AL589935.1-202ENST00000612512 393 ntTSL 5 BASIC3□□□□□ -1.93
LMO3Q8TAP4 AC040896.1-201ENST00000613819 479 ntBASIC3□□□□□ -1.93
LMO3Q8TAP4 AL359547.2-201ENST00000615810 418 ntBASIC3□□□□□ -1.93
LMO3Q8TAP4 MTND5P42-201ENST00000637720 498 ntBASIC3□□□□□ -1.93
LMO3Q8TAP4 TMEM68-218ENST00000617782 2477 ntAPPRIS P1 TSL 5 BASIC3□□□□□ -1.93
LMO3Q8TAP4 CLOCK-201ENST00000309964 10304 ntAPPRIS P1 TSL 1 (best) BASIC3□□□□□ -1.93
LMO3Q8TAP4 EVI5-201ENST00000370331 7403 ntAPPRIS P3 TSL 1 (best) BASIC3□□□□□ -1.93
LMO3Q8TAP4 C1orf141-203ENST00000371007 2153 ntAPPRIS P3 TSL 5 BASIC3□□□□□ -1.93
LMO3Q8TAP4 AC108750.1-201ENST00000637986 2706 ntAPPRIS P1 TSL 4 BASIC2.99□□□□□ -1.93
LMO3Q8TAP4 ATP2B1-201ENST00000261173 6777 ntAPPRIS P1 TSL 1 (best) BASIC2.99□□□□□ -1.93
LMO3Q8TAP4 CCDC82-202ENST00000423339 1878 ntAPPRIS P2 TSL 1 (best) BASIC2.99□□□□□ -1.93
LMO3Q8TAP4 BIRC3-206ENST00000532808 4238 ntAPPRIS P1 TSL 5 BASIC2.99□□□□□ -1.93
Retrieved 100 of 98,524 protein–RNA pairs in 137.2 ms