Protein–RNA interactions for Protein: Q8N3V7

SYNPO, Synaptopodin, humanhuman

Predictions only

Length 929 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SYNPOQ8N3V7 TLR10-206ENST00000508334 2616 ntAPPRIS P1 TSL 1 (best) BASIC3.9□□□□□ -1.79
SYNPOQ8N3V7 GCSAML-203ENST00000366491 4130 ntAPPRIS ALT2 TSL 2 BASIC3.89□□□□□ -1.79
SYNPOQ8N3V7 PREPL-206ENST00000409936 5212 ntAPPRIS P1 TSL 1 (best) BASIC3.89□□□□□ -1.79
SYNPOQ8N3V7 BMP5-201ENST00000370830 3952 ntAPPRIS P1 TSL 1 (best) BASIC3.89□□□□□ -1.79
SYNPOQ8N3V7 MYOT-201ENST00000239926 2337 ntAPPRIS P1 TSL 1 (best) BASIC3.89□□□□□ -1.79
SYNPOQ8N3V7 DMD-201ENST00000288447 3856 ntTSL 1 (best) BASIC3.89□□□□□ -1.79
SYNPOQ8N3V7 CHM-205ENST00000615443 2821 ntTSL 1 (best) BASIC3.89□□□□□ -1.79
SYNPOQ8N3V7 AL079305.1-201ENST00000623159 3008 ntBASIC3.89□□□□□ -1.79
SYNPOQ8N3V7 CASP1-201ENST00000353247 423 ntTSL 1 (best) BASIC3.89□□□□□ -1.79
SYNPOQ8N3V7 SNORD56.1-201ENST00000362913 68 ntBASIC3.89□□□□□ -1.79
SYNPOQ8N3V7 RNU6-310P-201ENST00000384655 107 ntBASIC3.89□□□□□ -1.79
SYNPOQ8N3V7 TRAJ34-201ENST00000390503 58 ntAPPRIS P1 BASIC3.89□□□□□ -1.79
SYNPOQ8N3V7 Y_RNA.646-201ENST00000410980 101 ntBASIC3.89□□□□□ -1.79
SYNPOQ8N3V7 AC023141.4-201ENST00000412031 328 ntBASIC3.89□□□□□ -1.79
SYNPOQ8N3V7 SETP5-201ENST00000437270 562 ntBASIC3.89□□□□□ -1.79
SYNPOQ8N3V7 HMGB1P37-201ENST00000439613 609 ntBASIC3.89□□□□□ -1.79
SYNPOQ8N3V7 CYCSP35-201ENST00000451978 304 ntBASIC3.89□□□□□ -1.79
SYNPOQ8N3V7 AC133134.1-201ENST00000466800 359 ntBASIC3.89□□□□□ -1.79
SYNPOQ8N3V7 SNRPGP7-201ENST00000469016 106 ntBASIC3.89□□□□□ -1.79
SYNPOQ8N3V7 AKIRIN2P1-201ENST00000505898 352 ntBASIC3.89□□□□□ -1.79
SYNPOQ8N3V7 AC005476.1-201ENST00000554427 397 ntBASIC3.89□□□□□ -1.79
SYNPOQ8N3V7 AL355877.2-201ENST00000603670 358 ntBASIC3.89□□□□□ -1.79
SYNPOQ8N3V7 AL773545.4-201ENST00000637262 310 ntBASIC3.89□□□□□ -1.79
SYNPOQ8N3V7 AL513478.4-201ENST00000641636 310 ntBASIC3.89□□□□□ -1.79
SYNPOQ8N3V7 GABRG2-215ENST00000639213 9960 ntTSL 1 (best) BASIC3.89□□□□□ -1.79
SYNPOQ8N3V7 PLAG1-201ENST00000316981 7322 ntAPPRIS P1 TSL 1 (best) BASIC3.89□□□□□ -1.79
SYNPOQ8N3V7 AC108750.1-201ENST00000637986 2706 ntAPPRIS P1 TSL 4 BASIC3.89□□□□□ -1.79
SYNPOQ8N3V7 CDC27P3-201ENST00000635418 1910 ntBASIC3.89□□□□□ -1.79
SYNPOQ8N3V7 EMSY-210ENST00000529032 6848 ntAPPRIS P3 TSL 1 (best) BASIC3.89□□□□□ -1.79
SYNPOQ8N3V7 FBXL13-204ENST00000436908 2577 ntTSL 5 BASIC3.89□□□□□ -1.79
SYNPOQ8N3V7 PTPN22-207ENST00000528414 3424 ntTSL 1 (best) BASIC3.89□□□□□ -1.79
SYNPOQ8N3V7 XIRP2-204ENST00000409273 12269 ntTSL 1 (best) BASIC3.89□□□□□ -1.79
SYNPOQ8N3V7 MCMDC2-201ENST00000313616 2043 ntTSL 2 BASIC3.88□□□□□ -1.79
SYNPOQ8N3V7 CUL4B-202ENST00000371322 4902 ntAPPRIS P1 TSL 1 (best) BASIC3.88□□□□□ -1.79
SYNPOQ8N3V7 MYSM1-203ENST00000472487 7785 ntAPPRIS P1 TSL 1 (best) BASIC3.88□□□□□ -1.79
SYNPOQ8N3V7 SPZ1-201ENST00000296739 1868 ntAPPRIS P2 BASIC3.88□□□□□ -1.79
SYNPOQ8N3V7 LINC01416-201ENST00000563553 2310 ntTSL 1 (best) BASIC3.88□□□□□ -1.79
SYNPOQ8N3V7 EVI5-208ENST00000540033 7436 ntAPPRIS ALT2 TSL 1 (best) BASIC3.88□□□□□ -1.79
SYNPOQ8N3V7 ERBB4-203ENST00000402597 11699 ntTSL 1 (best) BASIC3.88□□□□□ -1.79
SYNPOQ8N3V7 RNU6-942P-201ENST00000363002 107 ntBASIC3.88□□□□□ -1.79
SYNPOQ8N3V7 RNU6-43P-201ENST00000384302 107 ntBASIC3.88□□□□□ -1.79
SYNPOQ8N3V7 MIR767-201ENST00000390228 109 ntBASIC3.88□□□□□ -1.79
SYNPOQ8N3V7 IGLV5-37-201ENST00000390300 374 ntAPPRIS P1 BASIC3.88□□□□□ -1.79
SYNPOQ8N3V7 ATP5A1P2-201ENST00000412323 255 ntBASIC3.88□□□□□ -1.79
SYNPOQ8N3V7 UBE2Q2P12-201ENST00000414573 204 ntBASIC3.88□□□□□ -1.79
SYNPOQ8N3V7 AL445488.1-202ENST00000430623 545 ntTSL 3 BASIC3.88□□□□□ -1.79
SYNPOQ8N3V7 MTCYBP40-201ENST00000509390 1135 ntBASIC3.88□□□□□ -1.79
SYNPOQ8N3V7 AC008869.1-201ENST00000510938 442 ntTSL 2 BASIC3.88□□□□□ -1.79
SYNPOQ8N3V7 AC093303.1-201ENST00000514549 295 ntBASIC3.88□□□□□ -1.79
SYNPOQ8N3V7 AC112196.1-201ENST00000515092 832 ntTSL 3 BASIC3.88□□□□□ -1.79
SYNPOQ8N3V7 SCARNA15.1-201ENST00000516384 125 ntBASIC3.88□□□□□ -1.79
SYNPOQ8N3V7 RNU6-612P-201ENST00000516909 102 ntBASIC3.88□□□□□ -1.79
SYNPOQ8N3V7 ACA59.2-201ENST00000517061 156 ntBASIC3.88□□□□□ -1.79
SYNPOQ8N3V7 AC025871.1-202ENST00000518819 432 ntTSL 3 BASIC3.88□□□□□ -1.79
SYNPOQ8N3V7 AC007991.1-201ENST00000522680 631 ntBASIC3.88□□□□□ -1.79
SYNPOQ8N3V7 AL132780.1-202ENST00000548322 591 ntTSL 4 BASIC3.88□□□□□ -1.79
SYNPOQ8N3V7 AC093249.1-201ENST00000567049 203 ntBASIC3.88□□□□□ -1.79
SYNPOQ8N3V7 MIR3200-201ENST00000580767 85 ntBASIC3.88□□□□□ -1.79
SYNPOQ8N3V7 ZNF616-203ENST00000597013 577 ntTSL 4 BASIC3.88□□□□□ -1.79
SYNPOQ8N3V7 AC018889.1-201ENST00000605372 397 ntBASIC3.88□□□□□ -1.79
SYNPOQ8N3V7 RNU1-30P-201ENST00000606575 163 ntBASIC3.88□□□□□ -1.79
SYNPOQ8N3V7 DLEU2_5.1-201ENST00000615567 84 ntBASIC3.88□□□□□ -1.79
SYNPOQ8N3V7 VGLL4-219ENST00000638314 93 ntTSL 5 BASIC3.88□□□□□ -1.79
SYNPOQ8N3V7 IL33-203ENST00000456383 2501 ntTSL 5 BASIC3.88□□□□□ -1.79
SYNPOQ8N3V7 RAB3C-201ENST00000282878 8896 ntAPPRIS P1 TSL 1 (best) BASIC3.88□□□□□ -1.79
SYNPOQ8N3V7 CAPS2-206ENST00000409799 1859 ntTSL 1 (best) BASIC3.88□□□□□ -1.79
SYNPOQ8N3V7 PRB2-201ENST00000389362 1429 ntAPPRIS P2 TSL 5 BASIC3.87□□□□□ -1.79
SYNPOQ8N3V7 NCAM2-201ENST00000284894 4699 ntAPPRIS ALT2 TSL 5 BASIC3.87□□□□□ -1.79
SYNPOQ8N3V7 PDE1A-205ENST00000435564 4885 ntAPPRIS P3 TSL 1 (best) BASIC3.87□□□□□ -1.79
SYNPOQ8N3V7 ZBTB8OSP1-201ENST00000342688 498 ntBASIC3.87□□□□□ -1.79
SYNPOQ8N3V7 MIR369-201ENST00000362155 70 ntBASIC3.87□□□□□ -1.79
SYNPOQ8N3V7 Y_RNA.404-201ENST00000383978 102 ntBASIC3.87□□□□□ -1.79
SYNPOQ8N3V7 RNU6-331P-201ENST00000384724 107 ntBASIC3.87□□□□□ -1.79
SYNPOQ8N3V7 RNU6-328P-201ENST00000390887 106 ntBASIC3.87□□□□□ -1.79
SYNPOQ8N3V7 RNA5SP354-201ENST00000391247 136 ntBASIC3.87□□□□□ -1.79
SYNPOQ8N3V7 DEFB110-202ENST00000393660 189 ntAPPRIS ALT2 TSL 1 (best) BASIC3.87□□□□□ -1.79
SYNPOQ8N3V7 ATG3P1-201ENST00000419507 911 ntBASIC3.87□□□□□ -1.79
SYNPOQ8N3V7 DAP3P1-201ENST00000441522 278 ntBASIC3.87□□□□□ -1.79
SYNPOQ8N3V7 AC095032.1-201ENST00000444810 527 ntTSL 3 BASIC3.87□□□□□ -1.79
SYNPOQ8N3V7 SNORD5.1-201ENST00000458800 75 ntBASIC3.87□□□□□ -1.79
SYNPOQ8N3V7 MIR2053-201ENST00000459295 91 ntBASIC3.87□□□□□ -1.79
SYNPOQ8N3V7 AC107626.1-201ENST00000471084 183 ntBASIC3.87□□□□□ -1.79
SYNPOQ8N3V7 AC005741.1-201ENST00000511094 432 ntBASIC3.87□□□□□ -1.79
SYNPOQ8N3V7 SMURF2P1-201ENST00000514992 481 ntBASIC3.87□□□□□ -1.79
SYNPOQ8N3V7 AC010420.1-201ENST00000515077 509 ntTSL 3 BASIC3.87□□□□□ -1.79
SYNPOQ8N3V7 SCARNA13-201ENST00000516672 275 ntBASIC3.87□□□□□ -1.79
SYNPOQ8N3V7 LINC02155-201ENST00000519215 407 ntTSL 5 BASIC3.87□□□□□ -1.79
SYNPOQ8N3V7 AC022634.1-201ENST00000520765 532 ntBASIC3.87□□□□□ -1.79
SYNPOQ8N3V7 AP005902.1-201ENST00000521358 186 ntBASIC3.87□□□□□ -1.79
SYNPOQ8N3V7 LINC01195-201ENST00000570118 451 ntTSL 3 BASIC3.87□□□□□ -1.79
SYNPOQ8N3V7 AC127024.3-201ENST00000582841 460 ntTSL 3 BASIC3.87□□□□□ -1.79
SYNPOQ8N3V7 AC011494.1-201ENST00000596454 237 ntBASIC3.87□□□□□ -1.79
SYNPOQ8N3V7 XIST_intron.1-201ENST00000619444 68 ntBASIC3.87□□□□□ -1.79
SYNPOQ8N3V7 ZNF266-203ENST00000588933 3293 ntAPPRIS P1 TSL 1 (best) BASIC3.87□□□□□ -1.79
SYNPOQ8N3V7 ZNF280D-201ENST00000267807 4328 ntAPPRIS P3 TSL 1 (best) BASIC3.87□□□□□ -1.79
SYNPOQ8N3V7 ADGRG2-205ENST00000357991 4661 ntAPPRIS P3 TSL 1 (best) BASIC3.87□□□□□ -1.79
SYNPOQ8N3V7 PLS1-201ENST00000337777 3755 ntAPPRIS P1 TSL 1 (best) BASIC3.87□□□□□ -1.79
SYNPOQ8N3V7 PPP1R9A-208ENST00000456331 10090 ntTSL 1 (best) BASIC3.87□□□□□ -1.79
SYNPOQ8N3V7 MACC1-201ENST00000332878 2994 ntAPPRIS P1 TSL 1 (best) BASIC3.87□□□□□ -1.79
SYNPOQ8N3V7 CFAP44-202ENST00000393845 7069 ntAPPRIS ALT2 TSL 5 BASIC3.87□□□□□ -1.79
Retrieved 100 of 98,524 protein–RNA pairs in 107.4 ms