Protein–RNA interactions for Protein: Q8IUM7

NPAS4, Neuronal PAS domain-containing protein 4, humanhuman

Predictions only

Length 802 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NPAS4Q8IUM7 LINC02110-201ENST00000503870 546 ntTSL 3 BASIC4.55□□□□□ -1.68
NPAS4Q8IUM7 AC004052.1-202ENST00000505680 516 ntTSL 3 BASIC4.55□□□□□ -1.68
NPAS4Q8IUM7 RNU6-789P-201ENST00000517105 102 ntBASIC4.55□□□□□ -1.68
NPAS4Q8IUM7 AC022039.1-201ENST00000527110 488 ntTSL 2 BASIC4.55□□□□□ -1.68
NPAS4Q8IUM7 LINC01479-202ENST00000546170 444 ntTSL 2 BASIC4.55□□□□□ -1.68
NPAS4Q8IUM7 MIR5696-201ENST00000578474 85 ntBASIC4.55□□□□□ -1.68
NPAS4Q8IUM7 MIR663AHG-231ENST00000609044 590 ntTSL 5 BASIC4.55□□□□□ -1.68
NPAS4Q8IUM7 AC009318.2-201ENST00000610917 651 ntBASIC4.55□□□□□ -1.68
NPAS4Q8IUM7 RDM1-221ENST00000617591 432 ntTSL 1 (best) BASIC4.55□□□□□ -1.68
NPAS4Q8IUM7 SDR42E1P4-201ENST00000620894 481 ntBASIC4.55□□□□□ -1.68
NPAS4Q8IUM7 DLEU2_6.2-201ENST00000620994 136 ntBASIC4.55□□□□□ -1.68
NPAS4Q8IUM7 MIR3529-201ENST00000637713 78 ntBASIC4.55□□□□□ -1.68
NPAS4Q8IUM7 CSMD3-203ENST00000343508 13018 ntTSL 1 (best) BASIC4.55□□□□□ -1.68
NPAS4Q8IUM7 EIF2AK2-201ENST00000233057 10042 ntAPPRIS P1 TSL 2 BASIC4.55□□□□□ -1.68
NPAS4Q8IUM7 DCUN1D1-208ENST00000632685 3147 ntTSL 1 (best) BASIC4.55□□□□□ -1.68
NPAS4Q8IUM7 MAPK10-372ENST00000641954 3413 ntBASIC4.55□□□□□ -1.68
NPAS4Q8IUM7 TMEM38B-201ENST00000374688 3956 ntTSL 2 BASIC4.55□□□□□ -1.68
NPAS4Q8IUM7 CTNNA3-203ENST00000433211 10675 ntAPPRIS P1 TSL 1 (best) BASIC4.55□□□□□ -1.68
NPAS4Q8IUM7 SYT16-205ENST00000568344 13978 ntAPPRIS P1 TSL 1 (best) BASIC4.55□□□□□ -1.68
NPAS4Q8IUM7 EIF2S1-202ENST00000466499 2390 ntAPPRIS P1 TSL 1 (best) BASIC4.55□□□□□ -1.68
NPAS4Q8IUM7 ADGRL2-204ENST00000370715 5585 ntTSL 1 (best) BASIC4.55□□□□□ -1.68
NPAS4Q8IUM7 GPAM-201ENST00000348367 6371 ntAPPRIS P1 TSL 1 (best) BASIC4.55□□□□□ -1.68
NPAS4Q8IUM7 AC007256.1-201ENST00000392253 2765 ntBASIC4.54□□□□□ -1.68
NPAS4Q8IUM7 FMO2-201ENST00000209929 3851 ntAPPRIS P1 TSL 1 (best) BASIC4.54□□□□□ -1.68
NPAS4Q8IUM7 KIAA0586-202ENST00000354386 5226 ntAPPRIS ALT2 TSL 2 BASIC4.54□□□□□ -1.68
NPAS4Q8IUM7 CCDC102B-201ENST00000360242 2711 ntAPPRIS P1 TSL 1 (best) BASIC4.54□□□□□ -1.68
NPAS4Q8IUM7 SCN1A-202ENST00000375405 8097 ntAPPRIS P3 TSL 5 BASIC4.54□□□□□ -1.68
NPAS4Q8IUM7 CAPS2-206ENST00000409799 1859 ntTSL 1 (best) BASIC4.54□□□□□ -1.68
NPAS4Q8IUM7 TECRL-202ENST00000507440 2876 ntTSL 5 BASIC4.54□□□□□ -1.68
NPAS4Q8IUM7 RIMS2-201ENST00000262231 3854 ntTSL 1 (best) BASIC4.54□□□□□ -1.68
NPAS4Q8IUM7 RNU6-942P-201ENST00000363002 107 ntBASIC4.54□□□□□ -1.68
NPAS4Q8IUM7 Y_RNA.123-201ENST00000363338 102 ntBASIC4.54□□□□□ -1.68
NPAS4Q8IUM7 RNU6-595P-201ENST00000363944 107 ntBASIC4.54□□□□□ -1.68
NPAS4Q8IUM7 SNORD6-201ENST00000365444 73 ntBASIC4.54□□□□□ -1.68
NPAS4Q8IUM7 PTMAP2-201ENST00000397627 327 ntBASIC4.54□□□□□ -1.68
NPAS4Q8IUM7 RNU6ATAC-201ENST00000408749 126 ntBASIC4.54□□□□□ -1.68
NPAS4Q8IUM7 EIF1AXP1-201ENST00000419267 435 ntBASIC4.54□□□□□ -1.68
NPAS4Q8IUM7 AC012506.4-201ENST00000421563 541 ntTSL 4 BASIC4.54□□□□□ -1.68
NPAS4Q8IUM7 PIGPP3-201ENST00000425307 415 ntBASIC4.54□□□□□ -1.68
NPAS4Q8IUM7 TAB3-AS1-201ENST00000428263 245 ntTSL 5 BASIC4.54□□□□□ -1.68
NPAS4Q8IUM7 AL138900.1-201ENST00000449345 399 ntTSL 3 BASIC4.54□□□□□ -1.68
NPAS4Q8IUM7 SSXP4-201ENST00000451349 245 ntBASIC4.54□□□□□ -1.68
NPAS4Q8IUM7 RN7SKP210-201ENST00000459176 261 ntBASIC4.54□□□□□ -1.68
NPAS4Q8IUM7 AC108751.2-201ENST00000469993 231 ntBASIC4.54□□□□□ -1.68
NPAS4Q8IUM7 AC108022.1-201ENST00000493466 478 ntBASIC4.54□□□□□ -1.68
NPAS4Q8IUM7 AC093852.1-201ENST00000503587 266 ntBASIC4.54□□□□□ -1.68
NPAS4Q8IUM7 SNORA40.15-201ENST00000516884 107 ntBASIC4.54□□□□□ -1.68
NPAS4Q8IUM7 RNU6-897P-201ENST00000517135 105 ntBASIC4.54□□□□□ -1.68
NPAS4Q8IUM7 AP000867.2-201ENST00000532468 320 ntBASIC4.54□□□□□ -1.68
NPAS4Q8IUM7 CR383656.8-201ENST00000549046 145 ntBASIC4.54□□□□□ -1.68
NPAS4Q8IUM7 AC021739.1-201ENST00000559631 174 ntBASIC4.54□□□□□ -1.68
NPAS4Q8IUM7 AC013565.1-201ENST00000565938 597 ntTSL 2 BASIC4.54□□□□□ -1.68
NPAS4Q8IUM7 AC022655.2-201ENST00000577280 318 ntBASIC4.54□□□□□ -1.68
NPAS4Q8IUM7 MIR4472-2-201ENST00000582069 67 ntBASIC4.54□□□□□ -1.68
NPAS4Q8IUM7 AC012433.1-201ENST00000588916 398 ntBASIC4.54□□□□□ -1.68
NPAS4Q8IUM7 AL606490.9-201ENST00000603331 271 ntBASIC4.54□□□□□ -1.68
NPAS4Q8IUM7 AC019159.1-201ENST00000605094 187 ntBASIC4.54□□□□□ -1.68
NPAS4Q8IUM7 AC090617.7-201ENST00000623952 126 ntBASIC4.54□□□□□ -1.68
NPAS4Q8IUM7 U6.104-201ENST00000637979 90 ntBASIC4.54□□□□□ -1.68
NPAS4Q8IUM7 C6orf10-209ENST00000612031 2179 ntAPPRIS ALT2 TSL 5 BASIC4.54□□□□□ -1.68
NPAS4Q8IUM7 OXR1-206ENST00000449762 2621 ntTSL 1 (best) BASIC4.54□□□□□ -1.68
NPAS4Q8IUM7 ABI3BP-201ENST00000284322 4498 ntAPPRIS P2 TSL 1 (best) BASIC4.54□□□□□ -1.68
NPAS4Q8IUM7 MYNN-202ENST00000356716 2833 ntAPPRIS P1 TSL 1 (best) BASIC4.54□□□□□ -1.68
NPAS4Q8IUM7 KIFAP3-202ENST00000367765 4111 ntTSL 2 BASIC4.53□□□□□ -1.68
NPAS4Q8IUM7 AC128685.1-201ENST00000490357 1834 ntTSL 5 BASIC4.53□□□□□ -1.68
NPAS4Q8IUM7 ZNF415-207ENST00000595193 2479 ntTSL 1 (best) BASIC4.53□□□□□ -1.68
NPAS4Q8IUM7 AC009541.1-201ENST00000438279 2662 ntBASIC4.53□□□□□ -1.68
NPAS4Q8IUM7 BBX-203ENST00000402543 3980 ntTSL 5 BASIC4.53□□□□□ -1.68
NPAS4Q8IUM7 RIF1-203ENST00000428287 7722 ntAPPRIS ALT2 TSL 1 (best) BASIC4.53□□□□□ -1.68
NPAS4Q8IUM7 EEF1A1-211ENST00000615060 3508 ntTSL 5 BASIC4.53□□□□□ -1.68
NPAS4Q8IUM7 U3.6-201ENST00000363622 211 ntBASIC4.53□□□□□ -1.68
NPAS4Q8IUM7 SNORA51.11-201ENST00000384442 131 ntBASIC4.53□□□□□ -1.68
NPAS4Q8IUM7 LINC01162-201ENST00000447262 447 ntTSL 5 BASIC4.53□□□□□ -1.68
NPAS4Q8IUM7 MRPL42P6-201ENST00000486397 371 ntBASIC4.53□□□□□ -1.68
NPAS4Q8IUM7 RPL30P10-201ENST00000488148 337 ntBASIC4.53□□□□□ -1.68
NPAS4Q8IUM7 RPS29P20-201ENST00000489592 171 ntBASIC4.53□□□□□ -1.68
NPAS4Q8IUM7 AC090124.1-201ENST00000525097 448 ntTSL 3 BASIC4.53□□□□□ -1.68
NPAS4Q8IUM7 AL590705.4-201ENST00000532209 134 ntBASIC4.53□□□□□ -1.68
NPAS4Q8IUM7 AC113146.1-202ENST00000560259 433 ntTSL 5 BASIC4.53□□□□□ -1.68
NPAS4Q8IUM7 LINC01919-202ENST00000579506 384 ntTSL 3 BASIC4.53□□□□□ -1.68
NPAS4Q8IUM7 ZRANB2-AS2-213ENST00000591654 719 ntTSL 5 BASIC4.53□□□□□ -1.68
NPAS4Q8IUM7 AL158827.2-201ENST00000602494 330 ntBASIC4.53□□□□□ -1.68
NPAS4Q8IUM7 AL356157.2-201ENST00000605122 111 ntBASIC4.53□□□□□ -1.68
NPAS4Q8IUM7 AC016747.2-202ENST00000607743 332 ntTSL 5 BASIC4.53□□□□□ -1.68
NPAS4Q8IUM7 MIR7151-201ENST00000617477 60 ntBASIC4.53□□□□□ -1.68
NPAS4Q8IUM7 AL691447.3-201ENST00000635020 330 ntBASIC4.53□□□□□ -1.68
NPAS4Q8IUM7 MYOT-201ENST00000239926 2337 ntAPPRIS P1 TSL 1 (best) BASIC4.53□□□□□ -1.68
NPAS4Q8IUM7 ZNF404-202ENST00000587539 1851 ntAPPRIS P2 TSL 5 BASIC4.53□□□□□ -1.68
NPAS4Q8IUM7 GRIK2-201ENST00000318991 4317 ntTSL 5 BASIC4.53□□□□□ -1.68
NPAS4Q8IUM7 NEAT1-202ENST00000501122 22743 ntBASIC4.53□□□□□ -1.68
NPAS4Q8IUM7 RAD17-208ENST00000380774 2117 ntAPPRIS P1 TSL 1 (best) BASIC4.52□□□□□ -1.69
NPAS4Q8IUM7 SLC17A1-204ENST00000476801 1704 ntAPPRIS P1 TSL 2 BASIC4.52□□□□□ -1.69
NPAS4Q8IUM7 AL161912.2-201ENST00000565707 3007 ntBASIC4.52□□□□□ -1.69
NPAS4Q8IUM7 DOCK7-218ENST00000635123 6297 ntAPPRIS ALT2 TSL 5 BASIC4.52□□□□□ -1.69
NPAS4Q8IUM7 AC106871.1-201ENST00000568324 3102 ntBASIC4.52□□□□□ -1.69
NPAS4Q8IUM7 HERC1-201ENST00000443617 15137 ntAPPRIS P1 TSL 1 (best) BASIC4.52□□□□□ -1.69
NPAS4Q8IUM7 DPRX-201ENST00000376650 648 ntAPPRIS P1 TSL 3 BASIC4.52□□□□□ -1.69
NPAS4Q8IUM7 Y_RNA.526-201ENST00000384572 110 ntBASIC4.52□□□□□ -1.69
NPAS4Q8IUM7 DEFB116-201ENST00000400549 309 ntAPPRIS P1 TSL 1 (best) BASIC4.52□□□□□ -1.69
NPAS4Q8IUM7 MIR1179-201ENST00000408703 91 ntBASIC4.52□□□□□ -1.69
Retrieved 100 of 98,524 protein–RNA pairs in 114.3 ms