Protein–RNA interactions for Protein: Q68DV7

RNF43, E3 ubiquitin-protein ligase RNF43, humanhuman

Predictions only

Length 783 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RNF43Q68DV7 AL450326.2-201ENST00000421913 1962 ntBASIC4.45□□□□□ -1.7
RNF43Q68DV7 AC018555.1-201ENST00000567548 1980 ntBASIC4.45□□□□□ -1.7
RNF43Q68DV7 SENP7-202ENST00000348610 3272 ntAPPRIS ALT2 TSL 1 (best) BASIC4.45□□□□□ -1.7
RNF43Q68DV7 FEZ2-201ENST00000305852 1782 ntTSL 5 BASIC4.45□□□□□ -1.7
RNF43Q68DV7 SLC25A17-202ENST00000402844 2405 ntTSL 2 BASIC4.45□□□□□ -1.7
RNF43Q68DV7 SPAM1-202ENST00000340011 2349 ntAPPRIS P4 TSL 1 (best) BASIC4.45□□□□□ -1.7
RNF43Q68DV7 OR8D1-203ENST00000641897 8285 ntAPPRIS P1 BASIC4.45□□□□□ -1.7
RNF43Q68DV7 LINC02458-201ENST00000500381 2941 ntTSL 2 BASIC4.45□□□□□ -1.7
RNF43Q68DV7 Y_RNA.275-201ENST00000364726 110 ntBASIC4.45□□□□□ -1.7
RNF43Q68DV7 Y_RNA.343-201ENST00000365354 112 ntBASIC4.45□□□□□ -1.7
RNF43Q68DV7 SNORD116-18-201ENST00000383961 92 ntBASIC4.45□□□□□ -1.7
RNF43Q68DV7 RNU6-131P-201ENST00000391144 107 ntBASIC4.45□□□□□ -1.7
RNF43Q68DV7 SNORA68.2-201ENST00000391263 128 ntBASIC4.45□□□□□ -1.7
RNF43Q68DV7 AC051618.1-201ENST00000414295 207 ntTSL 3 BASIC4.45□□□□□ -1.7
RNF43Q68DV7 RPL21P40-201ENST00000428586 483 ntBASIC4.45□□□□□ -1.7
RNF43Q68DV7 AL117339.2-201ENST00000430475 180 ntBASIC4.45□□□□□ -1.7
RNF43Q68DV7 IGKV1OR9-2-201ENST00000431378 277 ntBASIC4.45□□□□□ -1.7
RNF43Q68DV7 LINC01206-205ENST00000490001 949 ntTSL 5 BASIC4.45□□□□□ -1.7
RNF43Q68DV7 RNA5SP73-201ENST00000516744 108 ntBASIC4.45□□□□□ -1.7
RNF43Q68DV7 RNU6-612P-201ENST00000516909 102 ntBASIC4.45□□□□□ -1.7
RNF43Q68DV7 AC090510.1-201ENST00000567456 425 ntTSL 3 BASIC4.45□□□□□ -1.7
RNF43Q68DV7 AC008739.3-201ENST00000603262 127 ntBASIC4.45□□□□□ -1.7
RNF43Q68DV7 RANBP2-201ENST00000283195 11711 ntAPPRIS P1 TSL 1 (best) BASIC4.45□□□□□ -1.7
RNF43Q68DV7 NCK1-204ENST00000469404 2403 ntTSL 2 BASIC4.45□□□□□ -1.7
RNF43Q68DV7 LRRC49-222ENST00000560158 1898 ntTSL 5 BASIC4.45□□□□□ -1.7
RNF43Q68DV7 EPC1-203ENST00000375110 3909 ntTSL 1 (best) BASIC4.45□□□□□ -1.7
RNF43Q68DV7 ADAM7-201ENST00000175238 3367 ntAPPRIS P2 TSL 1 (best) BASIC4.45□□□□□ -1.7
RNF43Q68DV7 SYNE2-204ENST00000358025 21842 ntAPPRIS P3 TSL 5 BASIC4.45□□□□□ -1.7
RNF43Q68DV7 FAM169A-201ENST00000389156 5990 ntAPPRIS P1 TSL 1 (best) BASIC4.44□□□□□ -1.7
RNF43Q68DV7 RMDN2-204ENST00000406384 1932 ntAPPRIS P1 TSL 1 (best) BASIC4.44□□□□□ -1.7
RNF43Q68DV7 YWHAZ-211ENST00000457309 3007 ntAPPRIS P1 TSL 2 BASIC4.44□□□□□ -1.7
RNF43Q68DV7 AL133243.3-201ENST00000617415 3004 ntBASIC4.44□□□□□ -1.7
RNF43Q68DV7 OR8J3-203ENST00000641913 3047 ntAPPRIS P1 BASIC4.44□□□□□ -1.7
RNF43Q68DV7 LRRC9-202ENST00000445360 4717 ntAPPRIS P1 TSL 5 BASIC4.44□□□□□ -1.7
RNF43Q68DV7 SCAI-201ENST00000336505 12079 ntAPPRIS P1 TSL 1 (best) BASIC4.44□□□□□ -1.7
RNF43Q68DV7 RNU6-1301P-201ENST00000362724 104 ntBASIC4.44□□□□□ -1.7
RNF43Q68DV7 RNU6-1155P-201ENST00000363554 107 ntBASIC4.44□□□□□ -1.7
RNF43Q68DV7 LINC00583-201ENST00000381010 387 ntTSL 2 BASIC4.44□□□□□ -1.7
RNF43Q68DV7 RNU6-926P-201ENST00000384075 107 ntBASIC4.44□□□□□ -1.7
RNF43Q68DV7 Y_RNA.441-201ENST00000384123 112 ntBASIC4.44□□□□□ -1.7
RNF43Q68DV7 RNU6-146P-201ENST00000384602 108 ntBASIC4.44□□□□□ -1.7
RNF43Q68DV7 Y_RNA.569-201ENST00000384749 103 ntBASIC4.44□□□□□ -1.7
RNF43Q68DV7 SF3B1-202ENST00000409915 600 ntTSL 2 BASIC4.44□□□□□ -1.7
RNF43Q68DV7 RNU4-30P-201ENST00000410245 143 ntBASIC4.44□□□□□ -1.7
RNF43Q68DV7 RNU2-43P-201ENST00000410306 190 ntBASIC4.44□□□□□ -1.7
RNF43Q68DV7 RNA5SP306-201ENST00000411087 107 ntBASIC4.44□□□□□ -1.7
RNF43Q68DV7 LINC01701-201ENST00000419614 451 ntTSL 2 BASIC4.44□□□□□ -1.7
RNF43Q68DV7 MTCO1P5-201ENST00000433573 344 ntBASIC4.44□□□□□ -1.7
RNF43Q68DV7 AL135923.2-201ENST00000435444 501 ntTSL 2 BASIC4.44□□□□□ -1.7
RNF43Q68DV7 AL121760.1-201ENST00000447206 346 ntTSL 2 BASIC4.44□□□□□ -1.7
RNF43Q68DV7 RPL37P6-202ENST00000464216 403 ntBASIC4.44□□□□□ -1.7
RNF43Q68DV7 AC092919.1-201ENST00000467896 229 ntTSL 2 BASIC4.44□□□□□ -1.7
RNF43Q68DV7 VWA8P1-201ENST00000510889 176 ntBASIC4.44□□□□□ -1.7
RNF43Q68DV7 RNU6-1095P-201ENST00000516148 108 ntBASIC4.44□□□□□ -1.7
RNF43Q68DV7 RNA5SP49-201ENST00000516450 115 ntBASIC4.44□□□□□ -1.7
RNF43Q68DV7 RNU4ATAC6P-201ENST00000516592 126 ntBASIC4.44□□□□□ -1.7
RNF43Q68DV7 NDST1-AS1-201ENST00000519040 368 ntTSL 2 BASIC4.44□□□□□ -1.7
RNF43Q68DV7 AC090281.1-201ENST00000523019 276 ntBASIC4.44□□□□□ -1.7
RNF43Q68DV7 AC136475.4-201ENST00000534271 280 ntTSL 5 BASIC4.44□□□□□ -1.7
RNF43Q68DV7 AC090617.3-201ENST00000573670 475 ntBASIC4.44□□□□□ -1.7
RNF43Q68DV7 MIR1273C-201ENST00000578669 77 ntBASIC4.44□□□□□ -1.7
RNF43Q68DV7 AP000787.2-201ENST00000604432 568 ntBASIC4.44□□□□□ -1.7
RNF43Q68DV7 SNORD113-5-201ENST00000607261 78 ntBASIC4.44□□□□□ -1.7
RNF43Q68DV7 MIR8059-201ENST00000620427 81 ntBASIC4.44□□□□□ -1.7
RNF43Q68DV7 AL589740.1-204ENST00000634677 630 ntTSL 4 BASIC4.44□□□□□ -1.7
RNF43Q68DV7 IMPG2-201ENST00000193391 8337 ntAPPRIS P1 TSL 1 (best) BASIC4.44□□□□□ -1.7
RNF43Q68DV7 ZNF645-201ENST00000323684 1519 ntAPPRIS P1 BASIC4.44□□□□□ -1.7
RNF43Q68DV7 ASAH1-265ENST00000637922 2297 ntTSL 5 BASIC4.44□□□□□ -1.7
RNF43Q68DV7 MEI4-201ENST00000602452 4800 ntAPPRIS P1 TSL 5 BASIC4.44□□□□□ -1.7
RNF43Q68DV7 CYSLTR1-201ENST00000373304 2576 ntAPPRIS P1 TSL 1 (best) BASIC4.44□□□□□ -1.7
RNF43Q68DV7 MCMDC2-207ENST00000492775 1831 ntTSL 1 (best) BASIC4.44□□□□□ -1.7
RNF43Q68DV7 ZNF28-203ENST00000438150 5171 ntTSL 2 BASIC4.43□□□□□ -1.7
RNF43Q68DV7 PATJ-202ENST00000316485 3657 ntTSL 5 BASIC4.43□□□□□ -1.7
RNF43Q68DV7 SOS1-202ENST00000402219 8314 ntAPPRIS P2 TSL 1 (best) BASIC4.43□□□□□ -1.7
RNF43Q68DV7 FLJ46284-201ENST00000504861 3421 ntTSL 2 BASIC4.43□□□□□ -1.7
RNF43Q68DV7 LINC01902-202ENST00000636983 4607 ntTSL 5 BASIC4.43□□□□□ -1.7
RNF43Q68DV7 SCEL-205ENST00000535157 3096 ntAPPRIS ALT2 TSL 2 BASIC4.43□□□□□ -1.7
RNF43Q68DV7 WDR72-204ENST00000559418 3602 ntTSL 5 BASIC4.43□□□□□ -1.7
RNF43Q68DV7 XRCC4-203ENST00000396027 1530 ntAPPRIS ALT1 TSL 5 BASIC4.43□□□□□ -1.7
RNF43Q68DV7 CDK14-201ENST00000265741 4953 ntTSL 1 (best) BASIC4.43□□□□□ -1.7
RNF43Q68DV7 DDX4-204ENST00000505374 2884 ntAPPRIS P1 TSL 1 (best) BASIC4.43□□□□□ -1.7
RNF43Q68DV7 RNU1-14P-201ENST00000362759 152 ntBASIC4.43□□□□□ -1.7
RNF43Q68DV7 Y_RNA.82-201ENST00000363000 102 ntBASIC4.43□□□□□ -1.7
RNF43Q68DV7 Y_RNA.92-201ENST00000363043 102 ntBASIC4.43□□□□□ -1.7
RNF43Q68DV7 RNU6-263P-201ENST00000363811 107 ntBASIC4.43□□□□□ -1.7
RNF43Q68DV7 Y_RNA.235-201ENST00000364412 102 ntBASIC4.43□□□□□ -1.7
RNF43Q68DV7 RNU6-384P-201ENST00000364900 104 ntBASIC4.43□□□□□ -1.7
RNF43Q68DV7 Y_RNA.306-201ENST00000365015 102 ntBASIC4.43□□□□□ -1.7
RNF43Q68DV7 Y_RNA.312-201ENST00000365089 102 ntBASIC4.43□□□□□ -1.7
RNF43Q68DV7 Y_RNA.322-201ENST00000365151 102 ntBASIC4.43□□□□□ -1.7
RNF43Q68DV7 MIR200C-201ENST00000384980 68 ntBASIC4.43□□□□□ -1.7
RNF43Q68DV7 TRAV9-2-201ENST00000390441 394 ntAPPRIS P1 BASIC4.43□□□□□ -1.7
RNF43Q68DV7 RNA5SP56-201ENST00000410277 118 ntBASIC4.43□□□□□ -1.7
RNF43Q68DV7 Y_RNA.623-201ENST00000411128 95 ntBASIC4.43□□□□□ -1.7
RNF43Q68DV7 MTCO1P39-201ENST00000426148 480 ntBASIC4.43□□□□□ -1.7
RNF43Q68DV7 RPS20P1-201ENST00000434853 354 ntBASIC4.43□□□□□ -1.7
RNF43Q68DV7 RPL12P46-201ENST00000436610 195 ntBASIC4.43□□□□□ -1.7
RNF43Q68DV7 AC005002.2-201ENST00000438228 269 ntBASIC4.43□□□□□ -1.7
RNF43Q68DV7 ABCF2P2-201ENST00000450549 296 ntBASIC4.43□□□□□ -1.7
RNF43Q68DV7 Y_RNA.650-201ENST00000459002 102 ntBASIC4.43□□□□□ -1.7
Retrieved 100 of 98,524 protein–RNA pairs in 153 ms