| FOXC1 | Q12948 | CR383656.8-201 | ENST00000549046 | 145 nt | BASIC | 4.76 | □□□□□ -1.65 | | |
| FOXC1 | Q12948 | CYP4A27P-201 | ENST00000567218 | 190 nt | BASIC | 4.76 | □□□□□ -1.65 | | |
| FOXC1 | Q12948 | AC025946.2-201 | ENST00000603398 | 234 nt | BASIC | 4.76 | □□□□□ -1.65 | | |
| FOXC1 | Q12948 | ARF4P1-201 | ENST00000605447 | 541 nt | BASIC | 4.76 | □□□□□ -1.65 | | |
| FOXC1 | Q12948 | XPNPEP3-201 | ENST00000357137 | 7988 nt | APPRIS P1 TSL 1 (best) BASIC | 4.76 | □□□□□ -1.65 | | |
| FOXC1 | Q12948 | MYBPC1-221 | ENST00000551300 | 3934 nt | APPRIS ALT2 TSL 1 (best) BASIC | 4.76 | □□□□□ -1.65 | | |
| FOXC1 | Q12948 | MRPL50-201 | ENST00000374865 | 3332 nt | APPRIS P1 TSL 1 (best) BASIC | 4.76 | □□□□□ -1.65 | | |
| FOXC1 | Q12948 | ZNF611-201 | ENST00000319783 | 3153 nt | APPRIS P1 TSL 2 BASIC | 4.76 | □□□□□ -1.65 | | |
| FOXC1 | Q12948 | ZNF83-202 | ENST00000536937 | 2726 nt | APPRIS P1 TSL 2 BASIC | 4.76 | □□□□□ -1.65 | | |
| FOXC1 | Q12948 | INO80D-201 | ENST00000403263 | 14136 nt | APPRIS P1 TSL 5 BASIC | 4.76 | □□□□□ -1.65 | | |
| FOXC1 | Q12948 | AL121839.2-201 | ENST00000565058 | 6943 nt | BASIC | 4.76 | □□□□□ -1.65 | | |
| FOXC1 | Q12948 | FANCI-201 | ENST00000300027 | 4713 nt | APPRIS P3 TSL 5 BASIC | 4.76 | □□□□□ -1.65 | | |
| FOXC1 | Q12948 | USP26-203 | ENST00000511190 | 3665 nt | APPRIS P1 TSL 2 BASIC | 4.76 | □□□□□ -1.65 | | |
| FOXC1 | Q12948 | NBPF26-201 | ENST00000609741 | 3671 nt | TSL 5 BASIC | 4.76 | □□□□□ -1.65 | | |
| FOXC1 | Q12948 | PROM1-220 | ENST00000540805 | 3908 nt | APPRIS ALT2 TSL 5 BASIC | 4.76 | □□□□□ -1.65 | | |
| FOXC1 | Q12948 | MPDZ-212 | ENST00000538841 | 3186 nt | TSL 2 BASIC | 4.75 | □□□□□ -1.65 | | |
| FOXC1 | Q12948 | NRDC-213 | ENST00000539524 | 3417 nt | APPRIS ALT2 TSL 1 (best) BASIC | 4.75 | □□□□□ -1.65 | | |
| FOXC1 | Q12948 | PDE4B-201 | ENST00000329654 | 3998 nt | TSL 1 (best) BASIC | 4.75 | □□□□□ -1.65 | | |
| FOXC1 | Q12948 | ENPP2-208 | ENST00000522826 | 2667 nt | APPRIS ALT1 TSL 1 (best) BASIC | 4.75 | □□□□□ -1.65 | | |
| FOXC1 | Q12948 | AL161457.2-203 | ENST00000590767 | 2663 nt | TSL 5 BASIC | 4.75 | □□□□□ -1.65 | | |
| FOXC1 | Q12948 | ENPP2-201 | ENST00000075322 | 2651 nt | APPRIS ALT1 TSL 1 (best) BASIC | 4.75 | □□□□□ -1.65 | | |
| FOXC1 | Q12948 | RNF213-204 | ENST00000508628 | 17730 nt | APPRIS ALT2 TSL 5 BASIC | 4.75 | □□□□□ -1.65 | | |
| FOXC1 | Q12948 | TECRL-201 | ENST00000381210 | 3573 nt | APPRIS P1 TSL 1 (best) BASIC | 4.75 | □□□□□ -1.65 | | |
| FOXC1 | Q12948 | Y_RNA.415-201 | ENST00000384012 | 112 nt | BASIC | 4.75 | □□□□□ -1.65 | | |
| FOXC1 | Q12948 | SNORA18.3-201 | ENST00000384122 | 132 nt | BASIC | 4.75 | □□□□□ -1.65 | | |
| FOXC1 | Q12948 | REREP2Y-201 | ENST00000439103 | 200 nt | BASIC | 4.75 | □□□□□ -1.65 | | |
| FOXC1 | Q12948 | RPS4XP2-201 | ENST00000458402 | 793 nt | BASIC | 4.75 | □□□□□ -1.65 | | |
| FOXC1 | Q12948 | RPL21P10-201 | ENST00000463521 | 490 nt | BASIC | 4.75 | □□□□□ -1.65 | | |
| FOXC1 | Q12948 | SNORA31.9-201 | ENST00000516429 | 84 nt | BASIC | 4.75 | □□□□□ -1.65 | | |
| FOXC1 | Q12948 | AC136601.2-201 | ENST00000604356 | 474 nt | BASIC | 4.75 | □□□□□ -1.65 | | |
| FOXC1 | Q12948 | OR4C16-201 | ENST00000623907 | 933 nt | APPRIS P1 BASIC | 4.75 | □□□□□ -1.65 | | |
| FOXC1 | Q12948 | UBA3-213 | ENST00000631029 | 123 nt | TSL 5 BASIC | 4.75 | □□□□□ -1.65 | | |
| FOXC1 | Q12948 | FRAS1-207 | ENST00000512123 | 15624 nt | APPRIS P1 TSL 5 BASIC | 4.75 | □□□□□ -1.65 | | |
| FOXC1 | Q12948 | WASHC4-214 | ENST00000620430 | 5807 nt | APPRIS ALT1 TSL 1 (best) BASIC | 4.75 | □□□□□ -1.65 | | |
| FOXC1 | Q12948 | RGSL1-201 | ENST00000294854 | 3696 nt | APPRIS P1 TSL 1 (best) BASIC | 4.75 | □□□□□ -1.65 | | |
| FOXC1 | Q12948 | ZNF845-201 | ENST00000458035 | 4311 nt | APPRIS P1 TSL 4 BASIC | 4.75 | □□□□□ -1.65 | | |
| FOXC1 | Q12948 | AC004656.1-201 | ENST00000568479 | 4951 nt | BASIC | 4.75 | □□□□□ -1.65 | | |
| FOXC1 | Q12948 | ZEB1-219 | ENST00000560721 | 3368 nt | APPRIS ALT2 TSL 2 BASIC | 4.75 | □□□□□ -1.65 | | |
| FOXC1 | Q12948 | AMY2B-201 | ENST00000361355 | 2181 nt | APPRIS P1 TSL 1 (best) BASIC | 4.75 | □□□□□ -1.65 | | |
| FOXC1 | Q12948 | NKAIN2-204 | ENST00000545433 | 3052 nt | TSL 5 BASIC | 4.75 | □□□□□ -1.65 | | |
| FOXC1 | Q12948 | AHCTF1-201 | ENST00000326225 | 8633 nt | APPRIS P2 TSL 1 (best) BASIC | 4.75 | □□□□□ -1.65 | | |
| FOXC1 | Q12948 | RGS5-201 | ENST00000313961 | 5862 nt | APPRIS P3 TSL 1 (best) BASIC | 4.75 | □□□□□ -1.65 | | |
| FOXC1 | Q12948 | ZMYND11-217 | ENST00000627286 | 3914 nt | TSL 5 BASIC | 4.75 | □□□□□ -1.65 | | |
| FOXC1 | Q12948 | PNLIPRP3-201 | ENST00000369230 | 2354 nt | APPRIS P1 TSL 1 (best) BASIC | 4.75 | □□□□□ -1.65 | | |
| FOXC1 | Q12948 | ATP13A4-203 | ENST00000392443 | 4016 nt | TSL 5 BASIC | 4.75 | □□□□□ -1.65 | | |
| FOXC1 | Q12948 | SPART-202 | ENST00000438666 | 4789 nt | APPRIS P1 TSL 1 (best) BASIC | 4.74 | □□□□□ -1.65 | | |
| FOXC1 | Q12948 | C1orf141-205 | ENST00000475209 | 2079 nt | APPRIS ALT2 TSL 5 BASIC | 4.74 | □□□□□ -1.65 | | |
| FOXC1 | Q12948 | CEP57L1-213 | ENST00000520883 | 2055 nt | TSL 5 BASIC | 4.74 | □□□□□ -1.65 | | |
| FOXC1 | Q12948 | FGF1-214 | ENST00000612258 | 3805 nt | APPRIS P1 TSL 1 (best) BASIC | 4.74 | □□□□□ -1.65 | | |
| FOXC1 | Q12948 | FGF1-215 | ENST00000619447 | 3818 nt | APPRIS P1 TSL 4 BASIC | 4.74 | □□□□□ -1.65 | | |
| FOXC1 | Q12948 | NPSR1-AS1-202 | ENST00000419766 | 4821 nt | TSL 1 (best) BASIC | 4.74 | □□□□□ -1.65 | | |
| FOXC1 | Q12948 | MFAP1-201 | ENST00000267812 | 2155 nt | APPRIS P1 TSL 1 (best) BASIC | 4.74 | □□□□□ -1.65 | | |
| FOXC1 | Q12948 | KIF3A-203 | ENST00000403231 | 2181 nt | TSL 2 BASIC | 4.74 | □□□□□ -1.65 | | |
| FOXC1 | Q12948 | C6orf10-210 | ENST00000617061 | 1904 nt | APPRIS ALT2 TSL 5 BASIC | 4.74 | □□□□□ -1.65 | | |
| FOXC1 | Q12948 | XIRP2-207 | ENST00000628543 | 12182 nt | TSL 5 BASIC | 4.74 | □□□□□ -1.65 | | |
| FOXC1 | Q12948 | ERVH48-1-201 | ENST00000447535 | 2790 nt | TSL 1 (best) BASIC | 4.74 | □□□□□ -1.65 | | |
| FOXC1 | Q12948 | LINC02355-201 | ENST00000503100 | 2520 nt | TSL 1 (best) BASIC | 4.74 | □□□□□ -1.65 | | |
| FOXC1 | Q12948 | FCER1G-201 | ENST00000289902 | 591 nt | APPRIS P1 TSL 1 (best) BASIC | 4.74 | □□□□□ -1.65 | | |
| FOXC1 | Q12948 | RN7SKP186-201 | ENST00000365371 | 303 nt | BASIC | 4.74 | □□□□□ -1.65 | | |
| FOXC1 | Q12948 | BANF2-202 | ENST00000377805 | 444 nt | APPRIS P1 TSL 1 (best) BASIC | 4.74 | □□□□□ -1.65 | | |
| FOXC1 | Q12948 | SNORA72-201 | ENST00000384339 | 132 nt | BASIC | 4.74 | □□□□□ -1.65 | | |
| FOXC1 | Q12948 | SNORA70C-201 | ENST00000384538 | 135 nt | BASIC | 4.74 | □□□□□ -1.65 | | |
| FOXC1 | Q12948 | RNY1P7-201 | ENST00000384743 | 110 nt | BASIC | 4.74 | □□□□□ -1.65 | | |
| FOXC1 | Q12948 | RNU6-440P-201 | ENST00000390882 | 105 nt | BASIC | 4.74 | □□□□□ -1.65 | | |
| FOXC1 | Q12948 | AL357500.1-201 | ENST00000413004 | 279 nt | TSL 3 BASIC | 4.74 | □□□□□ -1.65 | | |
| FOXC1 | Q12948 | LINC00375-201 | ENST00000433074 | 601 nt | TSL 5 BASIC | 4.74 | □□□□□ -1.65 | | |
| FOXC1 | Q12948 | SNRPEP9-201 | ENST00000436794 | 238 nt | BASIC | 4.74 | □□□□□ -1.65 | | |
| FOXC1 | Q12948 | AC244670.1-201 | ENST00000436879 | 112 nt | BASIC | 4.74 | □□□□□ -1.65 | | |
| FOXC1 | Q12948 | RPL39P40-201 | ENST00000445481 | 146 nt | BASIC | 4.74 | □□□□□ -1.65 | | |
| FOXC1 | Q12948 | SNORD125-201 | ENST00000459538 | 96 nt | BASIC | 4.74 | □□□□□ -1.65 | | |
| FOXC1 | Q12948 | SNRPCP3-201 | ENST00000474888 | 476 nt | BASIC | 4.74 | □□□□□ -1.65 | | |
| FOXC1 | Q12948 | RPL31P41-201 | ENST00000477967 | 372 nt | BASIC | 4.74 | □□□□□ -1.65 | | |
| FOXC1 | Q12948 | RNU6-197P-201 | ENST00000516680 | 100 nt | BASIC | 4.74 | □□□□□ -1.65 | | |
| FOXC1 | Q12948 | SCARNA20.4-201 | ENST00000516969 | 131 nt | BASIC | 4.74 | □□□□□ -1.65 | | |
| FOXC1 | Q12948 | AC068992.1-201 | ENST00000521411 | 543 nt | TSL 5 BASIC | 4.74 | □□□□□ -1.65 | | |
| FOXC1 | Q12948 | AC022790.1-201 | ENST00000522872 | 204 nt | BASIC | 4.74 | □□□□□ -1.65 | | |
| FOXC1 | Q12948 | RGS5-208 | ENST00000530507 | 851 nt | APPRIS ALT1 TSL 3 BASIC | 4.74 | □□□□□ -1.65 | | |
| FOXC1 | Q12948 | CYCSP29-201 | ENST00000533731 | 318 nt | BASIC | 4.74 | □□□□□ -1.65 | | |
| FOXC1 | Q12948 | MIR3921-201 | ENST00000577308 | 85 nt | BASIC | 4.74 | □□□□□ -1.65 | | |
| FOXC1 | Q12948 | AC020895.1-201 | ENST00000595362 | 272 nt | BASIC | 4.74 | □□□□□ -1.65 | | |
| FOXC1 | Q12948 | LINC01068-202 | ENST00000620874 | 626 nt | TSL 3 BASIC | 4.74 | □□□□□ -1.65 | | |
| FOXC1 | Q12948 | AP003481.1-201 | ENST00000637808 | 351 nt | TSL 5 BASIC | 4.74 | □□□□□ -1.65 | | |
| FOXC1 | Q12948 | OR52E5-201 | ENST00000610445 | 2244 nt | APPRIS P1 BASIC | 4.74 | □□□□□ -1.65 | | |
| FOXC1 | Q12948 | AIMP1-202 | ENST00000394701 | 2586 nt | APPRIS ALT2 TSL 1 (best) BASIC | 4.74 | □□□□□ -1.65 | | |
| FOXC1 | Q12948 | LRRC49-223 | ENST00000560369 | 2586 nt | APPRIS ALT1 TSL 2 BASIC | 4.74 | □□□□□ -1.65 | | |
| FOXC1 | Q12948 | SLMAP-206 | ENST00000428312 | 4132 nt | TSL 1 (best) BASIC | 4.74 | □□□□□ -1.65 | | |
| FOXC1 | Q12948 | MCMDC2-204 | ENST00000422365 | 5096 nt | APPRIS P1 TSL 2 BASIC | 4.74 | □□□□□ -1.65 | | |
| FOXC1 | Q12948 | TLR6-201 | ENST00000381950 | 2938 nt | APPRIS P1 BASIC | 4.74 | □□□□□ -1.65 | | |
| FOXC1 | Q12948 | IREB2-201 | ENST00000258886 | 6354 nt | APPRIS P1 TSL 1 (best) BASIC | 4.74 | □□□□□ -1.65 | | |
| FOXC1 | Q12948 | ZNF28-204 | ENST00000457749 | 4556 nt | APPRIS P1 TSL 1 (best) BASIC | 4.74 | □□□□□ -1.65 | | |
| FOXC1 | Q12948 | EFCAB5-201 | ENST00000394835 | 5132 nt | APPRIS P2 TSL 1 (best) BASIC | 4.74 | □□□□□ -1.65 | | |
| FOXC1 | Q12948 | RPGRIP1L-201 | ENST00000262135 | 8195 nt | APPRIS P3 TSL 5 BASIC | 4.74 | □□□□□ -1.65 | | |
| FOXC1 | Q12948 | ZCCHC10-201 | ENST00000324170 | 2178 nt | APPRIS P3 TSL 1 (best) BASIC | 4.74 | □□□□□ -1.65 | | |
| FOXC1 | Q12948 | C6orf10-207 | ENST00000533191 | 2170 nt | APPRIS ALT2 TSL 1 (best) BASIC | 4.74 | □□□□□ -1.65 | | |
| FOXC1 | Q12948 | MYBPC1-207 | ENST00000545503 | 3569 nt | APPRIS ALT2 TSL 1 (best) BASIC | 4.74 | □□□□□ -1.65 | | |
| FOXC1 | Q12948 | CAST-201 | ENST00000309190 | 4282 nt | APPRIS P3 TSL 1 (best) BASIC | 4.74 | □□□□□ -1.65 | | |
| FOXC1 | Q12948 | RNF19A-205 | ENST00000519449 | 4330 nt | APPRIS P1 TSL 1 (best) BASIC | 4.73 | □□□□□ -1.65 | | |
| FOXC1 | Q12948 | SCRG1-201 | ENST00000296506 | 4420 nt | APPRIS P1 TSL 1 (best) BASIC | 4.73 | □□□□□ -1.65 | | |
| FOXC1 | Q12948 | PSMA4-201 | ENST00000044462 | 4411 nt | APPRIS P1 TSL 1 (best) BASIC | 4.73 | □□□□□ -1.65 | | |
| FOXC1 | Q12948 | USF3-202 | ENST00000478658 | 8461 nt | APPRIS P2 TSL 5 BASIC | 4.73 | □□□□□ -1.65 | | |