Protein–RNA interactions for Protein: Q01094

E2F1, Transcription factor E2F1, humanhuman

Predictions only

Length 437 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
E2F1Q01094 NEB-201ENST00000172853 20634 ntAPPRIS ALT2 TSL 1 (best) BASIC3.36□□□□□ -1.87
E2F1Q01094 KNTC1-204ENST00000436959 2412 ntTSL 2 BASIC3.36□□□□□ -1.87
E2F1Q01094 NEB-218ENST00000603639 25578 ntAPPRIS ALT2 TSL 5 BASIC3.36□□□□□ -1.87
E2F1Q01094 NEB-219ENST00000604864 25578 ntAPPRIS ALT2 TSL 5 BASIC3.36□□□□□ -1.87
E2F1Q01094 MME-211ENST00000492661 2854 ntAPPRIS P1 TSL 2 BASIC3.36□□□□□ -1.87
E2F1Q01094 ST7-AS2-206ENST00000456577 1351 ntTSL 1 (best) BASIC3.36□□□□□ -1.87
E2F1Q01094 PLPPR4-201ENST00000370184 4505 ntTSL 5 BASIC3.35□□□□□ -1.87
E2F1Q01094 PPIP5K2-203ENST00000414217 5842 ntAPPRIS P3 TSL 1 (best) BASIC3.35□□□□□ -1.87
E2F1Q01094 IQCG-205ENST00000455191 1981 ntAPPRIS P1 TSL 2 BASIC3.35□□□□□ -1.87
E2F1Q01094 USP33-201ENST00000357428 4155 ntTSL 5 BASIC3.35□□□□□ -1.87
E2F1Q01094 IL36B-202ENST00000327407 1052 ntAPPRIS P1 TSL 1 (best) BASIC3.35□□□□□ -1.87
E2F1Q01094 DEFB109C-201ENST00000382575 264 ntBASIC3.35□□□□□ -1.87
E2F1Q01094 DEFB109B-201ENST00000382656 264 ntBASIC3.35□□□□□ -1.87
E2F1Q01094 UBA52P6-201ENST00000399822 382 ntBASIC3.35□□□□□ -1.87
E2F1Q01094 AC062039.1-201ENST00000414394 565 ntTSL 2 BASIC3.35□□□□□ -1.87
E2F1Q01094 AL109914.1-201ENST00000414740 146 ntTSL 5 BASIC3.35□□□□□ -1.87
E2F1Q01094 AC245054.2-201ENST00000415639 319 ntBASIC3.35□□□□□ -1.87
E2F1Q01094 AC092047.1-201ENST00000424997 240 ntBASIC3.35□□□□□ -1.87
E2F1Q01094 NDUFB1P2-201ENST00000449477 176 ntBASIC3.35□□□□□ -1.87
E2F1Q01094 AL353148.1-201ENST00000449761 463 ntTSL 2 BASIC3.35□□□□□ -1.87
E2F1Q01094 AP001486.1-201ENST00000463339 476 ntBASIC3.35□□□□□ -1.87
E2F1Q01094 AC027575.1-201ENST00000481064 460 ntBASIC3.35□□□□□ -1.87
E2F1Q01094 RPL30P5-201ENST00000494923 336 ntBASIC3.35□□□□□ -1.87
E2F1Q01094 AC116337.1-201ENST00000509680 687 ntBASIC3.35□□□□□ -1.87
E2F1Q01094 AC096745.1-201ENST00000509945 370 ntBASIC3.35□□□□□ -1.87
E2F1Q01094 AC092436.3-201ENST00000511788 257 ntBASIC3.35□□□□□ -1.87
E2F1Q01094 AL359237.1-201ENST00000554305 826 ntTSL 5 BASIC3.35□□□□□ -1.87
E2F1Q01094 MIR4738-201ENST00000579134 87 ntBASIC3.35□□□□□ -1.87
E2F1Q01094 MIR5690-201ENST00000583739 73 ntBASIC3.35□□□□□ -1.87
E2F1Q01094 NUTF2P8-201ENST00000604593 363 ntBASIC3.35□□□□□ -1.87
E2F1Q01094 RNU6-85P-201ENST00000605989 107 ntBASIC3.35□□□□□ -1.87
E2F1Q01094 RMST_8.1-201ENST00000610287 165 ntBASIC3.35□□□□□ -1.87
E2F1Q01094 ATP5A1P2-202ENST00000616464 443 ntBASIC3.35□□□□□ -1.87
E2F1Q01094 SYCP2-201ENST00000357552 5567 ntAPPRIS P2 TSL 1 (best) BASIC3.35□□□□□ -1.87
E2F1Q01094 ZNF266-204ENST00000590306 3317 ntAPPRIS P1 TSL 1 (best) BASIC3.35□□□□□ -1.87
E2F1Q01094 RAD17-206ENST00000358030 2648 ntTSL 1 (best) BASIC3.35□□□□□ -1.87
E2F1Q01094 TMPRSS11A-202ENST00000508048 3247 ntAPPRIS ALT2 TSL 1 (best) BASIC3.34□□□□□ -1.87
E2F1Q01094 ZNF483-201ENST00000309235 3655 ntAPPRIS P1 TSL 1 (best) BASIC3.34□□□□□ -1.87
E2F1Q01094 EPS15-202ENST00000371730 4736 ntAPPRIS ALT2 TSL 1 (best) BASIC3.34□□□□□ -1.87
E2F1Q01094 FBXL13-204ENST00000436908 2577 ntTSL 5 BASIC3.34□□□□□ -1.87
E2F1Q01094 TEX30-201ENST00000376019 1689 ntTSL 2 BASIC3.34□□□□□ -1.87
E2F1Q01094 SLC5A3-201ENST00000381151 11576 ntAPPRIS P1 TSL 1 (best) BASIC3.34□□□□□ -1.87
E2F1Q01094 Y_RNA.187-201ENST00000363918 113 ntBASIC3.34□□□□□ -1.87
E2F1Q01094 RNU6-384P-201ENST00000364900 104 ntBASIC3.34□□□□□ -1.87
E2F1Q01094 RNU6-1329P-201ENST00000365664 107 ntBASIC3.34□□□□□ -1.87
E2F1Q01094 CCDC126-203ENST00000410069 890 ntAPPRIS P1 TSL 1 (best) BASIC3.34□□□□□ -1.87
E2F1Q01094 AL592148.1-201ENST00000413568 445 ntBASIC3.34□□□□□ -1.87
E2F1Q01094 UBE2V1P4-201ENST00000425374 344 ntBASIC3.34□□□□□ -1.87
E2F1Q01094 NDUFB1P1-201ENST00000435191 180 ntBASIC3.34□□□□□ -1.87
E2F1Q01094 BRK1P2-201ENST00000442875 223 ntBASIC3.34□□□□□ -1.87
E2F1Q01094 MRPS31P2-201ENST00000451581 518 ntBASIC3.34□□□□□ -1.87
E2F1Q01094 AL109763.1-201ENST00000455391 461 ntTSL 2 BASIC3.34□□□□□ -1.87
E2F1Q01094 ELOCP24-201ENST00000456370 334 ntBASIC3.34□□□□□ -1.87
E2F1Q01094 Y_RNA.653-201ENST00000459091 95 ntBASIC3.34□□□□□ -1.87
E2F1Q01094 RPL21P13-201ENST00000488305 481 ntBASIC3.34□□□□□ -1.87
E2F1Q01094 PHBP14-201ENST00000512887 367 ntBASIC3.34□□□□□ -1.87
E2F1Q01094 RNA5SP165-201ENST00000517142 115 ntBASIC3.34□□□□□ -1.87
E2F1Q01094 LINC02155-201ENST00000519215 407 ntTSL 5 BASIC3.34□□□□□ -1.87
E2F1Q01094 AC025871.1-201ENST00000523935 443 ntTSL 2 BASIC3.34□□□□□ -1.87
E2F1Q01094 AC087463.1-201ENST00000568541 556 ntTSL 2 BASIC3.34□□□□□ -1.87
E2F1Q01094 MIR5004-201ENST00000579078 107 ntBASIC3.34□□□□□ -1.87
E2F1Q01094 MIR4298-201ENST00000584380 73 ntBASIC3.34□□□□□ -1.87
E2F1Q01094 ELOCP5-201ENST00000604924 333 ntBASIC3.34□□□□□ -1.87
E2F1Q01094 AC007938.3-201ENST00000604965 623 ntBASIC3.34□□□□□ -1.87
E2F1Q01094 AL080274.1-201ENST00000605565 220 ntBASIC3.34□□□□□ -1.87
E2F1Q01094 MIR6128-201ENST00000615528 109 ntBASIC3.34□□□□□ -1.87
E2F1Q01094 USP12-203ENST00000620323 349 ntTSL 3 BASIC3.34□□□□□ -1.87
E2F1Q01094 AC244517.5-202ENST00000623741 500 ntTSL 3 BASIC3.34□□□□□ -1.87
E2F1Q01094 AC048347.1-201ENST00000624621 427 ntBASIC3.34□□□□□ -1.87
E2F1Q01094 TCF12-203ENST00000343827 3956 ntTSL 1 (best) BASIC3.34□□□□□ -1.87
E2F1Q01094 WDR49-201ENST00000308378 2594 ntAPPRIS P2 TSL 1 (best) BASIC3.34□□□□□ -1.88
E2F1Q01094 LRRTM2-201ENST00000274711 6017 ntAPPRIS P1 TSL 1 (best) BASIC3.34□□□□□ -1.88
E2F1Q01094 ARID2-206ENST00000457135 4356 ntTSL 1 (best) BASIC3.34□□□□□ -1.88
E2F1Q01094 ZNF804B-202ENST00000611114 3968 ntTSL 5 BASIC3.34□□□□□ -1.88
E2F1Q01094 PWAR6-201ENST00000552334 4618 ntBASIC3.34□□□□□ -1.88
E2F1Q01094 KPNA2P1-201ENST00000458289 1591 ntBASIC3.34□□□□□ -1.88
E2F1Q01094 PKHD1L1-201ENST00000378402 13076 ntAPPRIS P1 TSL 1 (best) BASIC3.33□□□□□ -1.88
E2F1Q01094 AL353743.1-202ENST00000431724 1695 ntBASIC3.33□□□□□ -1.88
E2F1Q01094 SNX10-209ENST00000619420 2361 ntAPPRIS ALT1 TSL 5 BASIC3.33□□□□□ -1.88
E2F1Q01094 CCSER2-201ENST00000224756 7664 ntAPPRIS P1 TSL 5 BASIC3.33□□□□□ -1.88
E2F1Q01094 DPP10-205ENST00000410059 6278 ntAPPRIS ALT2 TSL 1 (best) BASIC3.33□□□□□ -1.88
E2F1Q01094 AL049641.1-201ENST00000441055 1948 ntBASIC3.33□□□□□ -1.88
E2F1Q01094 ZNF826P-207ENST00000622273 1910 ntBASIC3.33□□□□□ -1.88
E2F1Q01094 MIR369-201ENST00000362155 70 ntBASIC3.33□□□□□ -1.88
E2F1Q01094 Y_RNA.128-201ENST00000363391 112 ntBASIC3.33□□□□□ -1.88
E2F1Q01094 Y_RNA.132-201ENST00000363421 102 ntBASIC3.33□□□□□ -1.88
E2F1Q01094 SNORD14B-201ENST00000364533 90 ntBASIC3.33□□□□□ -1.88
E2F1Q01094 RNU6-474P-201ENST00000384243 107 ntBASIC3.33□□□□□ -1.88
E2F1Q01094 SNORA40C-201ENST00000391285 128 ntBASIC3.33□□□□□ -1.88
E2F1Q01094 MIR548P-201ENST00000408336 84 ntBASIC3.33□□□□□ -1.88
E2F1Q01094 U3.39-201ENST00000408569 239 ntBASIC3.33□□□□□ -1.88
E2F1Q01094 RNU4-47P-201ENST00000410876 114 ntBASIC3.33□□□□□ -1.88
E2F1Q01094 RN7SKP53-201ENST00000411337 315 ntBASIC3.33□□□□□ -1.88
E2F1Q01094 AL645568.3-201ENST00000433683 316 ntBASIC3.33□□□□□ -1.88
E2F1Q01094 AL157937.1-201ENST00000435092 443 ntTSL 3 BASIC3.33□□□□□ -1.88
E2F1Q01094 HIGD1AP11-201ENST00000438361 280 ntBASIC3.33□□□□□ -1.88
E2F1Q01094 AC012081.1-201ENST00000462382 477 ntTSL 3 BASIC3.33□□□□□ -1.88
E2F1Q01094 RPL21P104-201ENST00000464143 478 ntBASIC3.33□□□□□ -1.88
E2F1Q01094 RPL27AP5-201ENST00000469428 449 ntBASIC3.33□□□□□ -1.88
E2F1Q01094 RN7SL594P-201ENST00000470590 287 ntBASIC3.33□□□□□ -1.88
Retrieved 100 of 98,524 protein–RNA pairs in 131.8 ms