Protein–RNA interactions for Protein: P62857

RPS28, 40S ribosomal protein S28, humanhuman

Known RBP Predictions only

Length 69 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RPS28P62857 MTND5P6-201ENST00000422338 1798 ntBASIC0.57□□□□□ -2.32
RPS28P62857 HIF1A-204ENST00000539097 3956 ntTSL 1 (best) BASIC0.57□□□□□ -2.32
RPS28P62857 CDR1-202ENST00000625883 1485 ntBASIC0.57□□□□□ -2.32
RPS28P62857 PMCH-201ENST00000329406 766 ntAPPRIS P1 TSL 1 (best) BASIC0.57□□□□□ -2.32
RPS28P62857 TRAJ47-201ENST00000390490 57 ntAPPRIS P1 BASIC0.57□□□□□ -2.32
RPS28P62857 RNU6-952P-201ENST00000391164 108 ntBASIC0.57□□□□□ -2.32
RPS28P62857 AL159990.1-201ENST00000415119 337 ntTSL 3 BASIC0.57□□□□□ -2.32
RPS28P62857 CLYBL-AS1-201ENST00000416009 621 ntTSL 3 BASIC0.57□□□□□ -2.32
RPS28P62857 LINC01427-201ENST00000420928 504 ntTSL 3 BASIC0.57□□□□□ -2.32
RPS28P62857 NLGN1-AS1-201ENST00000423873 815 ntTSL 3 BASIC0.57□□□□□ -2.32
RPS28P62857 AC007285.2-201ENST00000433088 518 ntTSL 3 BASIC0.57□□□□□ -2.32
RPS28P62857 AL159990.2-201ENST00000436491 337 ntTSL 3 BASIC0.57□□□□□ -2.32
RPS28P62857 AC003991.1-202ENST00000447058 777 ntTSL 3 BASIC0.57□□□□□ -2.32
RPS28P62857 ELOCP30-201ENST00000447108 299 ntBASIC0.57□□□□□ -2.32
RPS28P62857 RPL31P50-201ENST00000471002 296 ntBASIC0.57□□□□□ -2.32
RPS28P62857 AC079943.2-201ENST00000488999 716 ntTSL 3 BASIC0.57□□□□□ -2.32
RPS28P62857 AC134050.1-201ENST00000495088 933 ntBASIC0.57□□□□□ -2.32
RPS28P62857 MTCYBP18-201ENST00000501056 747 ntBASIC0.57□□□□□ -2.32
RPS28P62857 RPL38P4-201ENST00000502376 214 ntBASIC0.57□□□□□ -2.32
RPS28P62857 AC091917.2-201ENST00000505002 744 ntBASIC0.57□□□□□ -2.32
RPS28P62857 AC097473.1-201ENST00000508142 408 ntBASIC0.57□□□□□ -2.32
RPS28P62857 AC111194.2-201ENST00000511222 455 ntTSL 5 BASIC0.57□□□□□ -2.32
RPS28P62857 RNU5A-4P-201ENST00000516588 111 ntBASIC0.57□□□□□ -2.32
RPS28P62857 AC018541.1-202ENST00000518687 584 ntTSL 4 BASIC0.57□□□□□ -2.32
RPS28P62857 AC009902.1-201ENST00000519351 183 ntBASIC0.57□□□□□ -2.32
RPS28P62857 AC136628.3-201ENST00000521868 290 ntBASIC0.57□□□□□ -2.32
RPS28P62857 AF233439.1-201ENST00000526235 401 ntTSL 3 BASIC0.57□□□□□ -2.32
RPS28P62857 SLC2A13P1-201ENST00000531560 322 ntBASIC0.57□□□□□ -2.32
RPS28P62857 AP003498.1-201ENST00000532530 347 ntTSL 3 BASIC0.57□□□□□ -2.32
RPS28P62857 AK6P1-201ENST00000540219 478 ntBASIC0.57□□□□□ -2.32
RPS28P62857 AC010183.2-202ENST00000546791 382 ntTSL 3 BASIC0.57□□□□□ -2.32
RPS28P62857 MIR4255-201ENST00000579351 72 ntBASIC0.57□□□□□ -2.32
RPS28P62857 AC127540.1-201ENST00000580311 689 ntTSL 5 BASIC0.57□□□□□ -2.32
RPS28P62857 LINC01905-206ENST00000593180 524 ntTSL 2 BASIC0.57□□□□□ -2.32
RPS28P62857 AC013244.2-201ENST00000603396 103 ntBASIC0.57□□□□□ -2.32
RPS28P62857 KATNBL1P5-201ENST00000605015 517 ntBASIC0.57□□□□□ -2.32
RPS28P62857 AL365434.2-201ENST00000607979 234 ntBASIC0.57□□□□□ -2.32
RPS28P62857 AL512625.3-207ENST00000609749 477 ntTSL 3 BASIC0.57□□□□□ -2.32
RPS28P62857 AC013412.1-201ENST00000610687 192 ntBASIC0.57□□□□□ -2.32
RPS28P62857 AC092656.1-203ENST00000624134 423 ntBASIC0.57□□□□□ -2.32
RPS28P62857 AC022513.1-201ENST00000624512 117 ntBASIC0.57□□□□□ -2.32
RPS28P62857 AC068724.3-201ENST00000625906 87 ntBASIC0.57□□□□□ -2.32
RPS28P62857 C8orf59-201ENST00000321777 325 ntTSL 1 (best) BASIC0.56□□□□□ -2.32
RPS28P62857 snoU2_19.1-201ENST00000362361 80 ntBASIC0.56□□□□□ -2.32
RPS28P62857 RNA5SP387-201ENST00000364226 106 ntBASIC0.56□□□□□ -2.32
RPS28P62857 SNORD114-6-201ENST00000364393 72 ntBASIC0.56□□□□□ -2.32
RPS28P62857 RNU6-883P-201ENST00000384597 107 ntBASIC0.56□□□□□ -2.32
RPS28P62857 MIR34B-201ENST00000385076 84 ntBASIC0.56□□□□□ -2.32
RPS28P62857 MDM2-208ENST00000393410 732 ntTSL 1 (best) BASIC0.56□□□□□ -2.32
RPS28P62857 MDM2-210ENST00000393413 657 ntTSL 1 (best) BASIC0.56□□□□□ -2.32
RPS28P62857 AL359634.1-202ENST00000404721 284 ntBASIC0.56□□□□□ -2.32
RPS28P62857 Y_RNA.597-201ENST00000410463 100 ntBASIC0.56□□□□□ -2.32
RPS28P62857 RN7SKP61-201ENST00000410642 295 ntBASIC0.56□□□□□ -2.32
RPS28P62857 RNU4-53P-201ENST00000410828 140 ntBASIC0.56□□□□□ -2.32
RPS28P62857 AC051618.1-201ENST00000414295 207 ntTSL 3 BASIC0.56□□□□□ -2.32
RPS28P62857 LINC01817-201ENST00000429317 564 ntTSL 4 BASIC0.56□□□□□ -2.32
RPS28P62857 INTS6L-AS1-201ENST00000430820 398 ntTSL 3 BASIC0.56□□□□□ -2.32
RPS28P62857 RPL7P54-201ENST00000438336 674 ntBASIC0.56□□□□□ -2.32
RPS28P62857 GHRL-208ENST00000439975 326 ntTSL 1 (best) BASIC0.56□□□□□ -2.32
RPS28P62857 FAM103A2P-201ENST00000444122 354 ntBASIC0.56□□□□□ -2.32
RPS28P62857 RPS27AP8-201ENST00000452665 445 ntBASIC0.56□□□□□ -2.32
RPS28P62857 AC131571.1-202ENST00000454509 598 ntTSL 4 BASIC0.56□□□□□ -2.32
RPS28P62857 RNA5SP182-201ENST00000516064 82 ntBASIC0.56□□□□□ -2.32
RPS28P62857 RNU6-197P-201ENST00000516680 100 ntBASIC0.56□□□□□ -2.32
RPS28P62857 snoZ278.1-201ENST00000517059 112 ntBASIC0.56□□□□□ -2.32
RPS28P62857 SNORA31.24-201ENST00000517232 57 ntBASIC0.56□□□□□ -2.32
RPS28P62857 AC113145.1-201ENST00000522408 412 ntTSL 5 BASIC0.56□□□□□ -2.32
RPS28P62857 AC234778.2-201ENST00000566241 354 ntBASIC0.56□□□□□ -2.32
RPS28P62857 CR936218.1-201ENST00000570454 304 ntTSL 2 BASIC0.56□□□□□ -2.32
RPS28P62857 MIR3160-1-201ENST00000577972 85 ntBASIC0.56□□□□□ -2.32
RPS28P62857 AL590229.1-201ENST00000603497 542 ntBASIC0.56□□□□□ -2.32
RPS28P62857 AP000654.2-201ENST00000605633 586 ntBASIC0.56□□□□□ -2.32
RPS28P62857 MIR8057-201ENST00000620957 69 ntBASIC0.56□□□□□ -2.32
RPS28P62857 SLC25A46-204ENST00000504098 2345 ntTSL 5 BASIC0.56□□□□□ -2.32
RPS28P62857 AC002543.1-201ENST00000299783 1954 ntBASIC0.56□□□□□ -2.32
RPS28P62857 HSBP1P2-201ENST00000299671 229 ntBASIC0.55□□□□□ -2.32
RPS28P62857 SNORA58B-201ENST00000364259 136 ntBASIC0.55□□□□□ -2.32
RPS28P62857 AL357139.1-201ENST00000407792 426 ntBASIC0.55□□□□□ -2.32
RPS28P62857 AL590084.1-201ENST00000407885 387 ntBASIC0.55□□□□□ -2.32
RPS28P62857 RNU6-733P-201ENST00000410759 104 ntBASIC0.55□□□□□ -2.32
RPS28P62857 AC027644.1-201ENST00000419595 298 ntBASIC0.55□□□□□ -2.32
RPS28P62857 LINC02238-201ENST00000424953 557 ntTSL 5 BASIC0.55□□□□□ -2.32
RPS28P62857 C8orf59P1-201ENST00000429930 303 ntBASIC0.55□□□□□ -2.32
RPS28P62857 AC006369.2-201ENST00000431712 384 ntTSL 3 BASIC0.55□□□□□ -2.32
RPS28P62857 TTTY16-201ENST00000437686 192 ntTSL 1 (best) BASIC0.55□□□□□ -2.32
RPS28P62857 MTND2P20-201ENST00000440805 661 ntBASIC0.55□□□□□ -2.32
RPS28P62857 RN7SL542P-201ENST00000467147 294 ntBASIC0.55□□□□□ -2.32
RPS28P62857 RAP1BP2-201ENST00000478270 544 ntBASIC0.55□□□□□ -2.32
RPS28P62857 AC104564.1-201ENST00000493028 407 ntBASIC0.55□□□□□ -2.32
RPS28P62857 PDCD5P2-201ENST00000507570 312 ntBASIC0.55□□□□□ -2.32
RPS28P62857 SNORA3.4-201ENST00000515969 96 ntBASIC0.55□□□□□ -2.32
RPS28P62857 RNU6-322P-201ENST00000516010 103 ntBASIC0.55□□□□□ -2.32
RPS28P62857 HSPE1P18-201ENST00000517602 280 ntBASIC0.55□□□□□ -2.32
RPS28P62857 AP003122.3-201ENST00000526316 255 ntBASIC0.55□□□□□ -2.32
RPS28P62857 AP001001.1-201ENST00000532422 826 ntTSL 3 BASIC0.55□□□□□ -2.32
RPS28P62857 IFNG-AS1-201ENST00000536914 494 ntTSL 5 BASIC0.55□□□□□ -2.32
RPS28P62857 AL731537.2-201ENST00000561565 951 ntBASIC0.55□□□□□ -2.32
RPS28P62857 MIR4319-201ENST00000577285 85 ntBASIC0.55□□□□□ -2.32
RPS28P62857 AC008764.5-201ENST00000597851 190 ntTSL 5 BASIC0.55□□□□□ -2.32
RPS28P62857 AC078795.2-201ENST00000602835 1252 ntBASIC0.55□□□□□ -2.32
Retrieved 100 of 98,524 protein–RNA pairs in 116.1 ms