Protein–RNA interactions for Protein: P29279

CTGF, Connective tissue growth factor, humanhuman

Predictions only

Length 349 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CTGFP29279 RGPD4-201ENST00000408999 5464 ntAPPRIS P1 TSL 1 (best) BASIC3.59□□□□□ -1.83
CTGFP29279 OR10AG1-202ENST00000641071 2807 ntAPPRIS P1 BASIC3.59□□□□□ -1.84
CTGFP29279 SLITRK4-203ENST00000596188 8545 ntAPPRIS P1 TSL 1 (best) BASIC3.59□□□□□ -1.84
CTGFP29279 FEZ2-201ENST00000305852 1782 ntTSL 5 BASIC3.58□□□□□ -1.84
CTGFP29279 LRRC6-212ENST00000618342 1754 ntAPPRIS ALT1 TSL 5 BASIC3.58□□□□□ -1.84
CTGFP29279 SLITRK5-201ENST00000325089 21103 ntAPPRIS P1 TSL 1 (best) BASIC3.58□□□□□ -1.84
CTGFP29279 ADGRL3-215ENST00000512091 12636 ntTSL 1 (best) BASIC3.58□□□□□ -1.84
CTGFP29279 SLC16A10-201ENST00000368850 10051 ntTSL 1 (best) BASIC3.58□□□□□ -1.84
CTGFP29279 CENPF-201ENST00000366955 10307 ntAPPRIS P1 TSL 1 (best) BASIC3.58□□□□□ -1.84
CTGFP29279 NAIP-205ENST00000508426 4153 ntTSL 1 (best) BASIC3.58□□□□□ -1.84
CTGFP29279 AL136537.2-201ENST00000562049 2471 ntTSL 1 (best) BASIC3.58□□□□□ -1.84
CTGFP29279 AC062016.1-201ENST00000355719 319 ntBASIC3.58□□□□□ -1.84
CTGFP29279 Y_RNA.112-201ENST00000363250 102 ntBASIC3.58□□□□□ -1.84
CTGFP29279 Y_RNA.176-201ENST00000363815 109 ntBASIC3.58□□□□□ -1.84
CTGFP29279 Y_RNA.399-201ENST00000383955 105 ntBASIC3.58□□□□□ -1.84
CTGFP29279 RNU6-187P-201ENST00000384139 106 ntBASIC3.58□□□□□ -1.84
CTGFP29279 Y_RNA.447-201ENST00000384184 113 ntBASIC3.58□□□□□ -1.84
CTGFP29279 RNU6-1181P-201ENST00000384191 106 ntBASIC3.58□□□□□ -1.84
CTGFP29279 AL391417.1-201ENST00000404100 426 ntBASIC3.58□□□□□ -1.84
CTGFP29279 U51244.1-201ENST00000423120 374 ntTSL 3 BASIC3.58□□□□□ -1.84
CTGFP29279 UTS2B-203ENST00000427544 676 ntAPPRIS P1 TSL 1 (best) BASIC3.58□□□□□ -1.84
CTGFP29279 KRTAP19-11P-201ENST00000439851 104 ntBASIC3.58□□□□□ -1.84
CTGFP29279 AC091153.2-202ENST00000441700 384 ntTSL 3 BASIC3.58□□□□□ -1.84
CTGFP29279 AC067945.3-201ENST00000456176 386 ntTSL 5 BASIC3.58□□□□□ -1.84
CTGFP29279 AC092451.1-201ENST00000480211 153 ntBASIC3.58□□□□□ -1.84
CTGFP29279 AP001086.1-201ENST00000494882 321 ntBASIC3.58□□□□□ -1.84
CTGFP29279 MTND1P19-201ENST00000511780 315 ntBASIC3.58□□□□□ -1.84
CTGFP29279 SNHG1-219ENST00000542112 780 ntTSL 3 BASIC3.58□□□□□ -1.84
CTGFP29279 AC009145.1-201ENST00000563230 433 ntTSL 3 BASIC3.58□□□□□ -1.84
CTGFP29279 AL133383.1-201ENST00000569292 901 ntTSL 1 (best) BASIC3.58□□□□□ -1.84
CTGFP29279 AC015813.4-201ENST00000610469 179 ntBASIC3.58□□□□□ -1.84
CTGFP29279 U2.17-201ENST00000611454 95 ntBASIC3.58□□□□□ -1.84
CTGFP29279 AC099506.2-201ENST00000623074 221 ntBASIC3.58□□□□□ -1.84
CTGFP29279 XRCC4-205ENST00000511817 1636 ntAPPRIS P4 TSL 1 (best) BASIC3.58□□□□□ -1.84
CTGFP29279 AKT3-201ENST00000263826 7081 ntAPPRIS P1 TSL 1 (best) BASIC3.58□□□□□ -1.84
CTGFP29279 MTND5P19-201ENST00000424872 1794 ntBASIC3.58□□□□□ -1.84
CTGFP29279 UTRN-204ENST00000367545 12339 ntAPPRIS P1 TSL 5 BASIC3.58□□□□□ -1.84
CTGFP29279 PTPN13-202ENST00000411767 8119 ntAPPRIS ALT2 TSL 1 (best) BASIC3.57□□□□□ -1.84
CTGFP29279 SCN3A-209ENST00000639244 8854 ntTSL 5 BASIC3.57□□□□□ -1.84
CTGFP29279 CBLL1-201ENST00000222597 2003 ntAPPRIS ALT1 TSL 1 (best) BASIC3.57□□□□□ -1.84
CTGFP29279 DEFB108F-201ENST00000344638 222 ntBASIC3.57□□□□□ -1.84
CTGFP29279 RNU6-1252P-201ENST00000363054 104 ntBASIC3.57□□□□□ -1.84
CTGFP29279 RNU6-288P-201ENST00000363690 104 ntBASIC3.57□□□□□ -1.84
CTGFP29279 RNA5SP219-201ENST00000390940 113 ntBASIC3.57□□□□□ -1.84
CTGFP29279 SNORA16.2-201ENST00000390991 127 ntBASIC3.57□□□□□ -1.84
CTGFP29279 SNORD70.1-201ENST00000391007 85 ntBASIC3.57□□□□□ -1.84
CTGFP29279 PPP3R1-202ENST00000409377 684 ntTSL 3 BASIC3.57□□□□□ -1.84
CTGFP29279 AL513331.1-201ENST00000411908 397 ntBASIC3.57□□□□□ -1.84
CTGFP29279 HNRNPDLP1-201ENST00000412834 550 ntBASIC3.57□□□□□ -1.84
CTGFP29279 AP000473.1-201ENST00000413645 550 ntTSL 3 BASIC3.57□□□□□ -1.84
CTGFP29279 BX682237.1-201ENST00000415016 335 ntBASIC3.57□□□□□ -1.84
CTGFP29279 HMGB1P9-201ENST00000429856 646 ntBASIC3.57□□□□□ -1.84
CTGFP29279 AC093083.1-201ENST00000438633 347 ntTSL 3 BASIC3.57□□□□□ -1.84
CTGFP29279 AC093579.1-201ENST00000439455 352 ntTSL 2 BASIC3.57□□□□□ -1.84
CTGFP29279 AC007099.2-201ENST00000444852 336 ntTSL 5 BASIC3.57□□□□□ -1.84
CTGFP29279 AL357873.1-201ENST00000449215 282 ntTSL 3 BASIC3.57□□□□□ -1.84
CTGFP29279 DYNLL1P5-201ENST00000467158 270 ntBASIC3.57□□□□□ -1.84
CTGFP29279 RPS26P15-201ENST00000488067 348 ntBASIC3.57□□□□□ -1.84
CTGFP29279 GZMAP1-201ENST00000503054 631 ntBASIC3.57□□□□□ -1.84
CTGFP29279 RNA5SP367-201ENST00000516557 118 ntBASIC3.57□□□□□ -1.84
CTGFP29279 AP003174.2-201ENST00000544663 294 ntTSL 3 BASIC3.57□□□□□ -1.84
CTGFP29279 MGAT4C-207ENST00000552808 1937 ntAPPRIS P1 TSL 2 BASIC3.57□□□□□ -1.84
CTGFP29279 AL589765.7-201ENST00000601684 629 ntTSL 3 BASIC3.57□□□□□ -1.84
CTGFP29279 TARID-205ENST00000607033 2960 ntTSL 1 (best) BASIC3.57□□□□□ -1.84
CTGFP29279 AC083806.3-201ENST00000614016 455 ntBASIC3.57□□□□□ -1.84
CTGFP29279 SNORD39.4-201ENST00000620099 78 ntBASIC3.57□□□□□ -1.84
CTGFP29279 TRDN-206ENST00000628709 1661 ntAPPRIS ALT2 TSL 1 (best) BASIC3.57□□□□□ -1.84
CTGFP29279 IGHVIII-44-202ENST00000636235 289 ntBASIC3.57□□□□□ -1.84
CTGFP29279 MIR622-201ENST00000638396 96 ntBASIC3.57□□□□□ -1.84
CTGFP29279 PARP8-211ENST00000505554 3825 ntTSL 5 BASIC3.57□□□□□ -1.84
CTGFP29279 AF117829.1-206ENST00000621883 3802 ntBASIC3.57□□□□□ -1.84
CTGFP29279 PLPPR4-201ENST00000370184 4505 ntTSL 5 BASIC3.56□□□□□ -1.84
CTGFP29279 MINPP1-204ENST00000536010 2215 ntTSL 1 (best) BASIC3.56□□□□□ -1.84
CTGFP29279 USH2A-202ENST00000366942 6320 ntTSL 1 (best) BASIC3.56□□□□□ -1.84
CTGFP29279 AC005183.1-201ENST00000603687 1979 ntBASIC3.56□□□□□ -1.84
CTGFP29279 MTND5P30-201ENST00000452896 1731 ntBASIC3.56□□□□□ -1.84
CTGFP29279 PLAG1-201ENST00000316981 7322 ntAPPRIS P1 TSL 1 (best) BASIC3.56□□□□□ -1.84
CTGFP29279 SLC39A10-201ENST00000359634 5322 ntAPPRIS P1 TSL 1 (best) BASIC3.56□□□□□ -1.84
CTGFP29279 RNU6-1115P-201ENST00000362490 106 ntBASIC3.56□□□□□ -1.84
CTGFP29279 RNU6-450P-201ENST00000364654 107 ntBASIC3.56□□□□□ -1.84
CTGFP29279 RNU6-715P-201ENST00000365204 103 ntBASIC3.56□□□□□ -1.84
CTGFP29279 RNU6-1032P-201ENST00000384100 107 ntBASIC3.56□□□□□ -1.84
CTGFP29279 RNU6-434P-201ENST00000384376 107 ntBASIC3.56□□□□□ -1.84
CTGFP29279 RNU6-393P-201ENST00000384475 107 ntBASIC3.56□□□□□ -1.84
CTGFP29279 SNORD67-201ENST00000390833 111 ntBASIC3.56□□□□□ -1.84
CTGFP29279 Y_RNA.645-201ENST00000391229 102 ntBASIC3.56□□□□□ -1.84
CTGFP29279 AL445529.1-201ENST00000398713 389 ntBASIC3.56□□□□□ -1.84
CTGFP29279 LAP3P1-201ENST00000403648 294 ntBASIC3.56□□□□□ -1.84
CTGFP29279 RNA5SP104-201ENST00000410989 118 ntBASIC3.56□□□□□ -1.84
CTGFP29279 AL160275.2-201ENST00000412010 394 ntBASIC3.56□□□□□ -1.84
CTGFP29279 ACTR3BP6-201ENST00000422332 1241 ntBASIC3.56□□□□□ -1.84
CTGFP29279 AC105272.1-201ENST00000438604 198 ntBASIC3.56□□□□□ -1.84
CTGFP29279 AL035666.1-201ENST00000446195 348 ntBASIC3.56□□□□□ -1.84
CTGFP29279 NRG3-AS1-201ENST00000448936 555 ntTSL 2 BASIC3.56□□□□□ -1.84
CTGFP29279 AL109933.2-201ENST00000452651 260 ntBASIC3.56□□□□□ -1.84
CTGFP29279 AC133473.1-201ENST00000455173 299 ntBASIC3.56□□□□□ -1.84
CTGFP29279 Y_RNA.635-201ENST00000459041 101 ntBASIC3.56□□□□□ -1.84
CTGFP29279 RNU7-167P-201ENST00000459160 62 ntBASIC3.56□□□□□ -1.84
CTGFP29279 AC117462.1-201ENST00000461186 554 ntTSL 4 BASIC3.56□□□□□ -1.84
CTGFP29279 CREM-226ENST00000469949 721 ntTSL 3 BASIC3.56□□□□□ -1.84
Retrieved 100 of 98,524 protein–RNA pairs in 127.8 ms