Protein–RNA interactions for Protein: P19013

KRT4, Keratin, type II cytoskeletal 4, humanhuman

Predictions only

Length 534 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
KRT4P19013 RNU6-770P-201ENST00000363929 105 ntBASIC3.62□□□□□ -1.83
KRT4P19013 RNU4-50P-201ENST00000364361 141 ntBASIC3.62□□□□□ -1.83
KRT4P19013 RNU6-1329P-201ENST00000365664 107 ntBASIC3.62□□□□□ -1.83
KRT4P19013 Y_RNA.477-201ENST00000384352 108 ntBASIC3.62□□□□□ -1.83
KRT4P19013 RNU6-45P-201ENST00000384471 107 ntBASIC3.62□□□□□ -1.83
KRT4P19013 IGKV5-2-201ENST00000390244 408 ntAPPRIS P1 BASIC3.62□□□□□ -1.83
KRT4P19013 DEFB116-201ENST00000400549 309 ntAPPRIS P1 TSL 1 (best) BASIC3.62□□□□□ -1.83
KRT4P19013 SYF2P2-201ENST00000417620 583 ntBASIC3.62□□□□□ -1.83
KRT4P19013 RPL17P36-201ENST00000420302 549 ntBASIC3.62□□□□□ -1.83
KRT4P19013 AC079799.1-201ENST00000430696 331 ntTSL 3 BASIC3.62□□□□□ -1.83
KRT4P19013 AL031274.1-201ENST00000450334 232 ntBASIC3.62□□□□□ -1.83
KRT4P19013 CHEK2P4-201ENST00000450340 246 ntBASIC3.62□□□□□ -1.83
KRT4P19013 AC006539.3-201ENST00000454258 129 ntBASIC3.62□□□□□ -1.83
KRT4P19013 AC007967.1-201ENST00000455422 1159 ntBASIC3.62□□□□□ -1.83
KRT4P19013 PCMTD1P1-201ENST00000455560 355 ntBASIC3.62□□□□□ -1.83
KRT4P19013 RPL37P6-201ENST00000460682 294 ntBASIC3.62□□□□□ -1.83
KRT4P19013 HMGB1P25-201ENST00000468402 607 ntBASIC3.62□□□□□ -1.83
KRT4P19013 AC006463.2-201ENST00000473326 348 ntBASIC3.62□□□□□ -1.83
KRT4P19013 AC110768.1-201ENST00000509222 400 ntBASIC3.62□□□□□ -1.83
KRT4P19013 RNU6-352P-201ENST00000516908 107 ntBASIC3.62□□□□□ -1.83
KRT4P19013 RNU6-677P-201ENST00000516914 101 ntBASIC3.62□□□□□ -1.83
KRT4P19013 AC022039.1-201ENST00000527110 488 ntTSL 2 BASIC3.62□□□□□ -1.83
KRT4P19013 AC051619.2-201ENST00000559063 397 ntBASIC3.62□□□□□ -1.83
KRT4P19013 FAM60BP-201ENST00000578364 658 ntBASIC3.62□□□□□ -1.83
KRT4P19013 AC104534.1-201ENST00000594558 566 ntTSL 4 BASIC3.62□□□□□ -1.83
KRT4P19013 AC012119.1-201ENST00000603184 222 ntBASIC3.62□□□□□ -1.83
KRT4P19013 AC008745.1-201ENST00000604064 271 ntBASIC3.62□□□□□ -1.83
KRT4P19013 AL138686.1-201ENST00000612699 315 ntTSL 3 BASIC3.62□□□□□ -1.83
KRT4P19013 NRDE2-210ENST00000628832 132 ntTSL 5 BASIC3.62□□□□□ -1.83
KRT4P19013 AL512643.1-201ENST00000635735 524 ntBASIC3.62□□□□□ -1.83
KRT4P19013 FOXP2-207ENST00000393494 2664 ntAPPRIS P2 TSL 5 BASIC3.62□□□□□ -1.83
KRT4P19013 EVI2A-201ENST00000247270 1860 ntAPPRIS P3 TSL 2 BASIC3.62□□□□□ -1.83
KRT4P19013 ROCK1P1-203ENST00000608049 2457 ntTSL 1 (best) BASIC3.62□□□□□ -1.83
KRT4P19013 DMD-203ENST00000357033 13956 ntAPPRIS P3 TSL 1 (best) BASIC3.61□□□□□ -1.83
KRT4P19013 Y_RNA.19-201ENST00000362462 99 ntBASIC3.61□□□□□ -1.83
KRT4P19013 AP002088.1-201ENST00000382740 395 ntBASIC3.61□□□□□ -1.83
KRT4P19013 RNU6-213P-201ENST00000384051 104 ntBASIC3.61□□□□□ -1.83
KRT4P19013 TRAV39-201ENST00000390466 331 ntAPPRIS P1 BASIC3.61□□□□□ -1.83
KRT4P19013 AL022722.2-201ENST00000402519 180 ntBASIC3.61□□□□□ -1.83
KRT4P19013 SNORA3.3-201ENST00000408712 125 ntBASIC3.61□□□□□ -1.83
KRT4P19013 PPP3R1-202ENST00000409377 684 ntTSL 3 BASIC3.61□□□□□ -1.83
KRT4P19013 RNU6-174P-201ENST00000410406 106 ntBASIC3.61□□□□□ -1.83
KRT4P19013 AC079790.1-201ENST00000420365 507 ntTSL 3 BASIC3.61□□□□□ -1.83
KRT4P19013 AC245028.1-201ENST00000423259 256 ntBASIC3.61□□□□□ -1.83
KRT4P19013 BX276092.3-201ENST00000424182 230 ntBASIC3.61□□□□□ -1.83
KRT4P19013 PIGPP3-201ENST00000425307 415 ntBASIC3.61□□□□□ -1.83
KRT4P19013 AL133396.1-201ENST00000432048 687 ntBASIC3.61□□□□□ -1.83
KRT4P19013 AL138900.2-201ENST00000434098 156 ntTSL 3 BASIC3.61□□□□□ -1.83
KRT4P19013 NEFMP1-201ENST00000443423 1006 ntBASIC3.61□□□□□ -1.83
KRT4P19013 AC099794.1-201ENST00000450811 447 ntTSL 3 BASIC3.61□□□□□ -1.83
KRT4P19013 AC010401.1-201ENST00000463867 348 ntBASIC3.61□□□□□ -1.83
KRT4P19013 MED28P2-201ENST00000475771 317 ntBASIC3.61□□□□□ -1.83
KRT4P19013 RPL7P23-201ENST00000493874 747 ntBASIC3.61□□□□□ -1.83
KRT4P19013 HMGB1P35-201ENST00000503360 598 ntBASIC3.61□□□□□ -1.83
KRT4P19013 RNU1-61P-201ENST00000516107 151 ntBASIC3.61□□□□□ -1.83
KRT4P19013 Y_RNA.673-201ENST00000516306 88 ntBASIC3.61□□□□□ -1.83
KRT4P19013 RNU6-579P-201ENST00000516879 102 ntBASIC3.61□□□□□ -1.83
KRT4P19013 CDH12P4-201ENST00000517835 295 ntBASIC3.61□□□□□ -1.83
KRT4P19013 CDH12P3-201ENST00000517935 295 ntBASIC3.61□□□□□ -1.83
KRT4P19013 CDH12P1-201ENST00000518435 295 ntBASIC3.61□□□□□ -1.83
KRT4P19013 AC090124.1-201ENST00000525097 448 ntTSL 3 BASIC3.61□□□□□ -1.83
KRT4P19013 AP006587.4-201ENST00000526053 529 ntBASIC3.61□□□□□ -1.83
KRT4P19013 AC078889.1-201ENST00000536412 523 ntTSL 2 BASIC3.61□□□□□ -1.83
KRT4P19013 AP002892.1-201ENST00000537727 550 ntTSL 4 BASIC3.61□□□□□ -1.83
KRT4P19013 TRAV37-201ENST00000553906 342 ntBASIC3.61□□□□□ -1.83
KRT4P19013 AC025884.1-201ENST00000556034 378 ntBASIC3.61□□□□□ -1.83
KRT4P19013 AC006600.1-201ENST00000572529 153 ntBASIC3.61□□□□□ -1.83
KRT4P19013 AC023575.1-201ENST00000580510 358 ntBASIC3.61□□□□□ -1.83
KRT4P19013 MIR3939-201ENST00000582614 106 ntBASIC3.61□□□□□ -1.83
KRT4P19013 VN1R91P-201ENST00000594377 169 ntBASIC3.61□□□□□ -1.83
KRT4P19013 AC006077.1-201ENST00000604746 343 ntBASIC3.61□□□□□ -1.83
KRT4P19013 ELOCP5-201ENST00000604924 333 ntBASIC3.61□□□□□ -1.83
KRT4P19013 SDR42E1P2-201ENST00000614861 481 ntBASIC3.61□□□□□ -1.83
KRT4P19013 MUCL1-205ENST00000619042 243 ntAPPRIS ALT2 TSL 5 BASIC3.61□□□□□ -1.83
KRT4P19013 MIR6130-201ENST00000619419 109 ntBASIC3.61□□□□□ -1.83
KRT4P19013 SDR42E1P4-201ENST00000620894 481 ntBASIC3.61□□□□□ -1.83
KRT4P19013 AC022149.2-201ENST00000621061 203 ntBASIC3.61□□□□□ -1.83
KRT4P19013 MIR492-201ENST00000638676 116 ntBASIC3.61□□□□□ -1.83
KRT4P19013 FAM214A-216ENST00000619572 3548 ntAPPRIS P1 TSL 1 (best) BASIC3.61□□□□□ -1.83
KRT4P19013 RXFP1-205ENST00000448688 3861 ntTSL 1 (best) BASIC3.61□□□□□ -1.83
KRT4P19013 GPRC6A-202ENST00000368549 2622 ntTSL 1 (best) BASIC3.61□□□□□ -1.83
KRT4P19013 OR51L1-203ENST00000641819 7300 ntAPPRIS P1 BASIC3.61□□□□□ -1.83
KRT4P19013 SYTL2-203ENST00000359152 4123 ntAPPRIS ALT1 TSL 1 (best) BASIC3.61□□□□□ -1.83
KRT4P19013 ZNF415-207ENST00000595193 2479 ntTSL 1 (best) BASIC3.61□□□□□ -1.83
KRT4P19013 FAP-214ENST00000627638 2569 ntAPPRIS ALT1 TSL 5 BASIC3.6□□□□□ -1.83
KRT4P19013 RTKN2-201ENST00000315289 2383 ntTSL 2 BASIC3.6□□□□□ -1.83
KRT4P19013 FAP-201ENST00000188790 2780 ntAPPRIS P2 TSL 1 (best) BASIC3.6□□□□□ -1.83
KRT4P19013 AC138393.1-203ENST00000327086 343 ntBASIC3.6□□□□□ -1.83
KRT4P19013 Y_RNA.64-201ENST00000362845 102 ntBASIC3.6□□□□□ -1.83
KRT4P19013 MIR323B-201ENST00000385269 82 ntBASIC3.6□□□□□ -1.83
KRT4P19013 SNORA48.8-201ENST00000391324 134 ntBASIC3.6□□□□□ -1.83
KRT4P19013 AC110754.1-201ENST00000399740 601 ntBASIC3.6□□□□□ -1.83
KRT4P19013 U3.39-201ENST00000408569 239 ntBASIC3.6□□□□□ -1.83
KRT4P19013 AC239803.1-203ENST00000411978 452 ntTSL 2 BASIC3.6□□□□□ -1.83
KRT4P19013 YPEL5P1-201ENST00000419731 367 ntBASIC3.6□□□□□ -1.83
KRT4P19013 AL137014.1-201ENST00000420490 1226 ntBASIC3.6□□□□□ -1.83
KRT4P19013 AC099677.1-201ENST00000420575 175 ntBASIC3.6□□□□□ -1.83
KRT4P19013 AC016712.1-201ENST00000431088 378 ntBASIC3.6□□□□□ -1.83
KRT4P19013 DAP3P1-201ENST00000441522 278 ntBASIC3.6□□□□□ -1.83
KRT4P19013 AL121871.1-201ENST00000443413 436 ntBASIC3.6□□□□□ -1.83
Retrieved 100 of 98,524 protein–RNA pairs in 101.6 ms