Protein–RNA interactions for Protein: P04049

RAF1, RAF proto-oncogene serine/threonine-protein kinase, humanhuman

Predictions only

Length 648 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RAF1P04049 MRPL51-203ENST00000538814 501 ntTSL 2 BASIC2.71□□□□□ -1.98
RAF1P04049 AC090607.4-201ENST00000558192 369 ntTSL 3 BASIC2.71□□□□□ -1.98
RAF1P04049 MIR5583-1-201ENST00000580941 59 ntBASIC2.71□□□□□ -1.98
RAF1P04049 MIR548S-201ENST00000581352 82 ntBASIC2.71□□□□□ -1.98
RAF1P04049 MSMB-202ENST00000582163 488 ntAPPRIS P1 TSL 1 (best) BASIC2.71□□□□□ -1.98
RAF1P04049 AC015908.4-201ENST00000582334 575 ntTSL 4 BASIC2.71□□□□□ -1.98
RAF1P04049 UBL5P2-201ENST00000583788 219 ntBASIC2.71□□□□□ -1.98
RAF1P04049 AC104984.5-201ENST00000586878 94 ntBASIC2.71□□□□□ -1.98
RAF1P04049 LINC01897-203ENST00000591503 369 ntTSL 2 BASIC2.71□□□□□ -1.98
RAF1P04049 AC013412.1-201ENST00000610687 192 ntBASIC2.71□□□□□ -1.98
RAF1P04049 MIR622-201ENST00000638396 96 ntBASIC2.71□□□□□ -1.98
RAF1P04049 HSPA8P4-201ENST00000511877 1920 ntBASIC2.71□□□□□ -1.98
RAF1P04049 PIK3C2G-206ENST00000538779 4963 ntTSL 5 BASIC2.71□□□□□ -1.98
RAF1P04049 OR4G1P-203ENST00000641984 1631 ntBASIC2.71□□□□□ -1.98
RAF1P04049 ZNF280C-201ENST00000370978 4634 ntAPPRIS P1 TSL 1 (best) BASIC2.7□□□□□ -1.98
RAF1P04049 ZCCHC10-201ENST00000324170 2178 ntAPPRIS P3 TSL 1 (best) BASIC2.7□□□□□ -1.98
RAF1P04049 PIK3CA-201ENST00000263967 9093 ntAPPRIS P1 TSL 2 BASIC2.7□□□□□ -1.98
RAF1P04049 LIPI-203ENST00000536861 1529 ntAPPRIS ALT2 TSL 1 (best) BASIC2.7□□□□□ -1.98
RAF1P04049 ZBTB8OSP1-201ENST00000342688 498 ntBASIC2.7□□□□□ -1.98
RAF1P04049 RNU6-38P-201ENST00000384085 107 ntBASIC2.7□□□□□ -1.98
RAF1P04049 MT-TL1-201ENST00000386347 75 ntBASIC2.7□□□□□ -1.98
RAF1P04049 MIR767-201ENST00000390228 109 ntBASIC2.7□□□□□ -1.98
RAF1P04049 SNORD37.1-201ENST00000390968 65 ntBASIC2.7□□□□□ -1.98
RAF1P04049 RNA5SP354-201ENST00000391247 136 ntBASIC2.7□□□□□ -1.98
RAF1P04049 AL139039.1-201ENST00000401900 692 ntBASIC2.7□□□□□ -1.98
RAF1P04049 AL606923.1-201ENST00000406616 190 ntBASIC2.7□□□□□ -1.98
RAF1P04049 RNU4-46P-201ENST00000410818 138 ntBASIC2.7□□□□□ -1.98
RAF1P04049 RNA5SP111-201ENST00000411386 101 ntBASIC2.7□□□□□ -1.98
RAF1P04049 AC005062.1-207ENST00000418442 587 ntTSL 3 BASIC2.7□□□□□ -1.98
RAF1P04049 AC016710.1-201ENST00000421326 466 ntTSL 3 BASIC2.7□□□□□ -1.98
RAF1P04049 AC069540.2-201ENST00000441776 351 ntTSL 3 BASIC2.7□□□□□ -1.98
RAF1P04049 AC104058.1-201ENST00000448028 297 ntBASIC2.7□□□□□ -1.98
RAF1P04049 MYCBP2-AS1-203ENST00000450627 349 ntTSL 3 BASIC2.7□□□□□ -1.98
RAF1P04049 RNU6-333P-201ENST00000459117 107 ntBASIC2.7□□□□□ -1.98
RAF1P04049 RPS27AP9-201ENST00000477681 438 ntBASIC2.7□□□□□ -1.98
RAF1P04049 MTCYBP18-201ENST00000501056 747 ntBASIC2.7□□□□□ -1.98
RAF1P04049 RPL38P4-201ENST00000502376 214 ntBASIC2.7□□□□□ -1.98
RAF1P04049 AC114786.4-201ENST00000508771 728 ntBASIC2.7□□□□□ -1.98
RAF1P04049 AC004054.1-201ENST00000515111 270 ntTSL 3 BASIC2.7□□□□□ -1.98
RAF1P04049 RNU4-29P-201ENST00000515943 174 ntBASIC2.7□□□□□ -1.98
RAF1P04049 RNU6-143P-201ENST00000516942 93 ntBASIC2.7□□□□□ -1.98
RAF1P04049 UTP23-205ENST00000520733 369 ntTSL 3 BASIC2.7□□□□□ -1.98
RAF1P04049 AC021698.1-201ENST00000524858 716 ntTSL 3 BASIC2.7□□□□□ -1.98
RAF1P04049 GTF3AP2-201ENST00000557014 266 ntBASIC2.7□□□□□ -1.98
RAF1P04049 MIR3162-201ENST00000581818 82 ntBASIC2.7□□□□□ -1.98
RAF1P04049 AC135178.3-204ENST00000585181 451 ntTSL 2 BASIC2.7□□□□□ -1.98
RAF1P04049 AC012254.1-201ENST00000592747 200 ntTSL 3 BASIC2.7□□□□□ -1.98
RAF1P04049 BNIP3P9-201ENST00000603714 553 ntBASIC2.7□□□□□ -1.98
RAF1P04049 KCNQ1OT1_3.1-201ENST00000616504 116 ntBASIC2.7□□□□□ -1.98
RAF1P04049 AC002064.3-201ENST00000623448 346 ntBASIC2.7□□□□□ -1.98
RAF1P04049 AC244517.5-202ENST00000623741 500 ntTSL 3 BASIC2.7□□□□□ -1.98
RAF1P04049 AL359693.1-201ENST00000614959 2407 ntBASIC2.69□□□□□ -1.98
RAF1P04049 CDK1-201ENST00000316629 1733 ntTSL 5 BASIC2.69□□□□□ -1.98
RAF1P04049 RNU1-105P-201ENST00000363470 161 ntBASIC2.69□□□□□ -1.98
RAF1P04049 SNORA4.3-201ENST00000365564 137 ntBASIC2.69□□□□□ -1.98
RAF1P04049 SNORD15B-201ENST00000384714 146 ntBASIC2.69□□□□□ -1.98
RAF1P04049 MIR514A2-201ENST00000385131 88 ntBASIC2.69□□□□□ -1.98
RAF1P04049 MIR514A3-201ENST00000385132 88 ntBASIC2.69□□□□□ -1.98
RAF1P04049 TRAV26-1-201ENST00000390455 537 ntAPPRIS P1 BASIC2.69□□□□□ -1.98
RAF1P04049 TRAJ21-201ENST00000390516 55 ntAPPRIS P1 BASIC2.69□□□□□ -1.98
RAF1P04049 RNU6-876P-201ENST00000391295 104 ntBASIC2.69□□□□□ -1.98
RAF1P04049 AP003170.3-201ENST00000399123 158 ntTSL 5 BASIC2.69□□□□□ -1.98
RAF1P04049 AL590004.2-201ENST00000404787 371 ntBASIC2.69□□□□□ -1.98
RAF1P04049 PPP3R1-202ENST00000409377 684 ntTSL 3 BASIC2.69□□□□□ -1.98
RAF1P04049 Y_RNA.604-201ENST00000410574 102 ntBASIC2.69□□□□□ -1.98
RAF1P04049 RNA5SP492-201ENST00000411330 114 ntBASIC2.69□□□□□ -1.98
RAF1P04049 AP000473.1-201ENST00000413645 550 ntTSL 3 BASIC2.69□□□□□ -1.98
RAF1P04049 EEF1A1P41-201ENST00000414667 207 ntBASIC2.69□□□□□ -1.98
RAF1P04049 AC138393.2-201ENST00000414742 246 ntBASIC2.69□□□□□ -1.98
RAF1P04049 AC080125.1-201ENST00000414888 684 ntBASIC2.69□□□□□ -1.98
RAF1P04049 AC010967.2-201ENST00000418451 333 ntTSL 2 BASIC2.69□□□□□ -1.98
RAF1P04049 AL645937.1-202ENST00000421799 937 ntBASIC2.69□□□□□ -1.98
RAF1P04049 AL160275.3-201ENST00000423876 471 ntBASIC2.69□□□□□ -1.98
RAF1P04049 AL355314.2-201ENST00000427182 436 ntTSL 3 BASIC2.69□□□□□ -1.98
RAF1P04049 SRIP2-201ENST00000428470 166 ntBASIC2.69□□□□□ -1.98
RAF1P04049 TRAPPC2P3-201ENST00000443200 321 ntBASIC2.69□□□□□ -1.98
RAF1P04049 RPL32P28-201ENST00000443577 397 ntBASIC2.69□□□□□ -1.98
RAF1P04049 AC073342.1-202ENST00000446192 457 ntTSL 5 BASIC2.69□□□□□ -1.98
RAF1P04049 RPL23AP11-201ENST00000475260 469 ntBASIC2.69□□□□□ -1.98
RAF1P04049 RPS27P26-201ENST00000494583 239 ntBASIC2.69□□□□□ -1.98
RAF1P04049 AC009901.1-201ENST00000506703 541 ntBASIC2.69□□□□□ -1.98
RAF1P04049 CCDC34P1-201ENST00000507441 517 ntBASIC2.69□□□□□ -1.98
RAF1P04049 AC098799.2-201ENST00000509466 868 ntBASIC2.69□□□□□ -1.98
RAF1P04049 SKP1-203ENST00000517625 876 ntAPPRIS P4 TSL 3 BASIC2.69□□□□□ -1.98
RAF1P04049 AC068880.3-201ENST00000519185 179 ntTSL 5 BASIC2.69□□□□□ -1.98
RAF1P04049 AL137161.1-201ENST00000532231 390 ntBASIC2.69□□□□□ -1.98
RAF1P04049 LINC01570-201ENST00000561572 434 ntTSL 3 BASIC2.69□□□□□ -1.98
RAF1P04049 AC022960.1-201ENST00000582269 348 ntTSL 3 BASIC2.69□□□□□ -1.98
RAF1P04049 ELOCP29-201ENST00000588193 334 ntBASIC2.69□□□□□ -1.98
RAF1P04049 AL138889.2-201ENST00000603883 242 ntBASIC2.69□□□□□ -1.98
RAF1P04049 AC008162.2-201ENST00000613352 291 ntAPPRIS P1 TSL 3 BASIC2.69□□□□□ -1.98
RAF1P04049 AC006504.8-201ENST00000621046 635 ntBASIC2.69□□□□□ -1.98
RAF1P04049 CYLC1-202ENST00000621735 379 ntAPPRIS ALT2 TSL 3 BASIC2.69□□□□□ -1.98
RAF1P04049 Z99571.1-201ENST00000636677 394 ntBASIC2.69□□□□□ -1.98
RAF1P04049 LIG4-203ENST00000442234 3982 ntAPPRIS P1 TSL 1 (best) BASIC2.69□□□□□ -1.98
RAF1P04049 NEDD4-208ENST00000508342 7235 ntTSL 1 (best) BASIC2.69□□□□□ -1.98
RAF1P04049 PRKG1-205ENST00000401604 5922 ntTSL 5 BASIC2.69□□□□□ -1.98
RAF1P04049 APC-201ENST00000257430 10701 ntAPPRIS P1 TSL 5 BASIC2.69□□□□□ -1.98
RAF1P04049 KCNIP4-IT1-201ENST00000627566 9848 ntBASIC2.68□□□□□ -1.98
RAF1P04049 RNU4-66P-201ENST00000365199 138 ntBASIC2.68□□□□□ -1.98
Retrieved 100 of 98,524 protein–RNA pairs in 132.9 ms