Protein–RNA interactions for Protein: P02462

COL4A1, Collagen alpha-1(IV) chain, humanhuman

Predictions only

Length 1,669 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL4A1P02462 CCNG1P1-201ENST00000406783 885 ntBASIC1.23□□□□□ -2.21
COL4A1P02462 AC004870.3-202ENST00000412996 432 ntTSL 3 BASIC1.23□□□□□ -2.21
COL4A1P02462 RPL21P24-201ENST00000413752 448 ntBASIC1.23□□□□□ -2.21
COL4A1P02462 NDUFB4P7-201ENST00000423198 363 ntBASIC1.23□□□□□ -2.21
COL4A1P02462 AC113331.1-201ENST00000428160 869 ntTSL 2 BASIC1.23□□□□□ -2.21
COL4A1P02462 ZNF385D-AS2-201ENST00000436306 424 ntTSL 5 BASIC1.23□□□□□ -2.21
COL4A1P02462 AP000146.1-202ENST00000441666 441 ntTSL 3 BASIC1.23□□□□□ -2.21
COL4A1P02462 FGF7P5-201ENST00000441829 291 ntBASIC1.23□□□□□ -2.21
COL4A1P02462 OSTCP8-201ENST00000445117 448 ntBASIC1.23□□□□□ -2.21
COL4A1P02462 RPS27P1-201ENST00000450552 247 ntBASIC1.23□□□□□ -2.21
COL4A1P02462 AL359095.1-201ENST00000457383 635 ntTSL 3 BASIC1.23□□□□□ -2.21
COL4A1P02462 LINC01036-201ENST00000458683 858 ntTSL 3 BASIC1.23□□□□□ -2.21
COL4A1P02462 AC010631.1-201ENST00000474150 156 ntBASIC1.23□□□□□ -2.21
COL4A1P02462 AL160314.1-201ENST00000490836 438 ntBASIC1.23□□□□□ -2.21
COL4A1P02462 UBE2V1P12-201ENST00000503954 474 ntBASIC1.23□□□□□ -2.21
COL4A1P02462 LINC02173-201ENST00000504132 521 ntTSL 2 BASIC1.23□□□□□ -2.21
COL4A1P02462 EPGN-208ENST00000509145 222 ntTSL 1 (best) BASIC1.23□□□□□ -2.21
COL4A1P02462 LINC02494-201ENST00000509824 427 ntTSL 3 BASIC1.23□□□□□ -2.21
COL4A1P02462 AC034223.1-201ENST00000511054 599 ntTSL 3 BASIC1.23□□□□□ -2.21
COL4A1P02462 AC108517.1-201ENST00000512546 327 ntTSL 3 BASIC1.23□□□□□ -2.21
COL4A1P02462 LINC02484-202ENST00000514877 546 ntTSL 3 BASIC1.23□□□□□ -2.21
COL4A1P02462 SCARNA15.2-201ENST00000516409 127 ntBASIC1.23□□□□□ -2.21
COL4A1P02462 RNU5A-4P-201ENST00000516588 111 ntBASIC1.23□□□□□ -2.21
COL4A1P02462 RNU2-44P-201ENST00000516795 194 ntBASIC1.23□□□□□ -2.21
COL4A1P02462 RNU6-928P-201ENST00000516876 104 ntBASIC1.23□□□□□ -2.21
COL4A1P02462 AC130371.1-204ENST00000576197 401 ntTSL 3 BASIC1.23□□□□□ -2.21
COL4A1P02462 MIR4698-201ENST00000577795 80 ntBASIC1.23□□□□□ -2.21
COL4A1P02462 AC060771.1-201ENST00000582031 164 ntBASIC1.23□□□□□ -2.21
COL4A1P02462 MIR3609-201ENST00000582661 80 ntBASIC1.23□□□□□ -2.21
COL4A1P02462 AC103710.4-201ENST00000609301 899 ntBASIC1.23□□□□□ -2.21
COL4A1P02462 AC013476.2-201ENST00000614456 459 ntBASIC1.23□□□□□ -2.21
COL4A1P02462 PDCD6IPP1-201ENST00000615124 579 ntTSL 2 BASIC1.23□□□□□ -2.21
COL4A1P02462 AC112204.3-201ENST00000623822 332 ntBASIC1.23□□□□□ -2.21
COL4A1P02462 SERPINI2-209ENST00000616363 1769 ntTSL 5 BASIC1.22□□□□□ -2.21
COL4A1P02462 CEP290-201ENST00000309041 7616 ntAPPRIS ALT1 TSL 5 BASIC1.22□□□□□ -2.21
COL4A1P02462 MTND4P9-201ENST00000507819 1346 ntBASIC1.22□□□□□ -2.21
COL4A1P02462 AC011604.2-202ENST00000540229 2451 ntAPPRIS P5 TSL 2 BASIC1.22□□□□□ -2.21
COL4A1P02462 KIF27-203ENST00000376347 1030 ntTSL 5 BASIC1.22□□□□□ -2.21
COL4A1P02462 RNU6-925P-201ENST00000384629 104 ntBASIC1.22□□□□□ -2.21
COL4A1P02462 AL359704.1-201ENST00000411586 781 ntBASIC1.22□□□□□ -2.21
COL4A1P02462 SSR1P2-201ENST00000415208 787 ntBASIC1.22□□□□□ -2.21
COL4A1P02462 UBE2FP1-201ENST00000416536 447 ntBASIC1.22□□□□□ -2.21
COL4A1P02462 AL354692.1-201ENST00000423044 315 ntBASIC1.22□□□□□ -2.21
COL4A1P02462 AC003084.1-201ENST00000427030 435 ntTSL 5 BASIC1.22□□□□□ -2.21
COL4A1P02462 LINC00189-202ENST00000431661 308 ntTSL 5 BASIC1.22□□□□□ -2.21
COL4A1P02462 AC092839.1-201ENST00000433475 536 ntTSL 4 BASIC1.22□□□□□ -2.21
COL4A1P02462 CR769776.1-201ENST00000441254 787 ntBASIC1.22□□□□□ -2.21
COL4A1P02462 AL157373.1-201ENST00000456036 276 ntTSL 3 BASIC1.22□□□□□ -2.21
COL4A1P02462 AP1S2P1-201ENST00000457344 379 ntBASIC1.22□□□□□ -2.21
COL4A1P02462 HMGB1P36-201ENST00000487709 576 ntBASIC1.22□□□□□ -2.21
COL4A1P02462 CFLAR-225ENST00000494258 693 ntTSL 3 BASIC1.22□□□□□ -2.21
COL4A1P02462 RPL30P5-201ENST00000494923 336 ntBASIC1.22□□□□□ -2.21
COL4A1P02462 AC138853.1-201ENST00000503549 823 ntBASIC1.22□□□□□ -2.21
COL4A1P02462 AC025524.1-201ENST00000518489 606 ntTSL 4 BASIC1.22□□□□□ -2.21
COL4A1P02462 AC026991.1-201ENST00000520815 463 ntTSL 3 BASIC1.22□□□□□ -2.21
COL4A1P02462 LINC02165-201ENST00000563061 443 ntTSL 3 BASIC1.22□□□□□ -2.21
COL4A1P02462 HMGN2P15-201ENST00000585707 270 ntBASIC1.22□□□□□ -2.21
COL4A1P02462 AC106052.1-201ENST00000608029 497 ntBASIC1.22□□□□□ -2.21
COL4A1P02462 ANKRD36C-207ENST00000612359 650 ntTSL 1 (best) BASIC1.22□□□□□ -2.21
COL4A1P02462 AC016597.2-201ENST00000613256 341 ntBASIC1.22□□□□□ -2.21
COL4A1P02462 HMGB1P24-202ENST00000615653 685 ntBASIC1.22□□□□□ -2.21
COL4A1P02462 AL603758.1-201ENST00000618654 241 ntBASIC1.22□□□□□ -2.21
COL4A1P02462 UCA1.1-201ENST00000620952 75 ntBASIC1.22□□□□□ -2.21
COL4A1P02462 CRISP3-204ENST00000433368 2205 ntAPPRIS ALT2 TSL 5 BASIC1.22□□□□□ -2.21
COL4A1P02462 BRCA1-202ENST00000354071 4497 ntTSL 1 (best) BASIC1.22□□□□□ -2.21
COL4A1P02462 SPAM1-206ENST00000460182 2154 ntAPPRIS ALT2 TSL 1 (best) BASIC1.21□□□□□ -2.22
COL4A1P02462 AC008669.1-201ENST00000565823 2178 ntBASIC1.21□□□□□ -2.22
COL4A1P02462 SCOC-201ENST00000338517 1864 ntTSL 4 BASIC1.21□□□□□ -2.22
COL4A1P02462 Y_RNA.251-201ENST00000364551 99 ntBASIC1.21□□□□□ -2.22
COL4A1P02462 MIR532-201ENST00000385025 91 ntBASIC1.21□□□□□ -2.22
COL4A1P02462 U3.20-201ENST00000390909 217 ntBASIC1.21□□□□□ -2.22
COL4A1P02462 RN7SKP266-201ENST00000410232 287 ntBASIC1.21□□□□□ -2.22
COL4A1P02462 AC010731.2-201ENST00000415275 440 ntTSL 3 BASIC1.21□□□□□ -2.22
COL4A1P02462 LINC00397-201ENST00000422074 344 ntTSL 3 BASIC1.21□□□□□ -2.22
COL4A1P02462 BX005214.1-201ENST00000427327 476 ntTSL 5 BASIC1.21□□□□□ -2.22
COL4A1P02462 USP9YP11-201ENST00000427537 717 ntBASIC1.21□□□□□ -2.22
COL4A1P02462 RPL7L1P10-201ENST00000427790 463 ntBASIC1.21□□□□□ -2.22
COL4A1P02462 RPL30P4-201ENST00000429309 333 ntBASIC1.21□□□□□ -2.22
COL4A1P02462 AC015922.2-201ENST00000435593 184 ntBASIC1.21□□□□□ -2.22
COL4A1P02462 AL138830.1-201ENST00000435802 402 ntTSL 3 BASIC1.21□□□□□ -2.22
COL4A1P02462 AC009296.1-201ENST00000443146 155 ntBASIC1.21□□□□□ -2.22
COL4A1P02462 RPS15AP27-201ENST00000449183 343 ntBASIC1.21□□□□□ -2.22
COL4A1P02462 GJE1-201ENST00000450456 916 ntAPPRIS P1 TSL 5 BASIC1.21□□□□□ -2.22
COL4A1P02462 AC091951.3-201ENST00000504093 246 ntBASIC1.21□□□□□ -2.22
COL4A1P02462 AC008883.2-201ENST00000505796 414 ntTSL 3 BASIC1.21□□□□□ -2.22
COL4A1P02462 HTN1-204ENST00000511674 623 ntAPPRIS P1 TSL 2 BASIC1.21□□□□□ -2.22
COL4A1P02462 XIRP2-AS1-201ENST00000525330 776 ntTSL 3 BASIC1.21□□□□□ -2.22
COL4A1P02462 MTCO2P15-201ENST00000532655 656 ntBASIC1.21□□□□□ -2.22
COL4A1P02462 AC008083.1-201ENST00000547748 663 ntTSL 2 BASIC1.21□□□□□ -2.22
COL4A1P02462 AC008147.1-201ENST00000551284 325 ntTSL 3 BASIC1.21□□□□□ -2.22
COL4A1P02462 MTND4P33-201ENST00000556706 766 ntBASIC1.21□□□□□ -2.22
COL4A1P02462 CYCSP2-201ENST00000558168 301 ntBASIC1.21□□□□□ -2.22
COL4A1P02462 MTND1P8-201ENST00000571424 950 ntBASIC1.21□□□□□ -2.22
COL4A1P02462 MIR544B-201ENST00000582372 78 ntBASIC1.21□□□□□ -2.22
COL4A1P02462 AC005498.1-201ENST00000592125 465 ntBASIC1.21□□□□□ -2.22
COL4A1P02462 AC078899.2-201ENST00000595282 212 ntBASIC1.21□□□□□ -2.22
COL4A1P02462 AC007349.4-201ENST00000608114 532 ntBASIC1.21□□□□□ -2.22
COL4A1P02462 AC245297.2-201ENST00000610119 565 ntBASIC1.21□□□□□ -2.22
COL4A1P02462 UBE2Q2P6-201ENST00000612666 153 ntBASIC1.21□□□□□ -2.22
COL4A1P02462 C8orf59-208ENST00000612809 475 ntAPPRIS P1 TSL 1 (best) BASIC1.21□□□□□ -2.22
Retrieved 100 of 98,524 protein–RNA pairs in 125.1 ms