Protein–RNA interactions for Protein: P01909

HLA-DQA1, HLA class II histocompatibility antigen, DQ alpha 1 chain, humanhuman

Predictions only

Length 254 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DQA1P01909 ZNF658B-202ENST00000615961 3375 ntBASIC1.65□□□□□ -2.14
HLA-DQA1P01909 OR51A7-202ENST00000641490 2186 ntAPPRIS P1 BASIC1.65□□□□□ -2.14
HLA-DQA1P01909 FSD1L-201ENST00000374707 7062 ntTSL 1 (best) BASIC1.65□□□□□ -2.15
HLA-DQA1P01909 AL359851.1-201ENST00000569460 4997 ntBASIC1.65□□□□□ -2.15
HLA-DQA1P01909 DEFB114-201ENST00000322066 253 ntAPPRIS P1 TSL 1 (best) BASIC1.65□□□□□ -2.15
HLA-DQA1P01909 RNU1-72P-201ENST00000362976 153 ntBASIC1.65□□□□□ -2.15
HLA-DQA1P01909 U3.4-201ENST00000363352 213 ntBASIC1.65□□□□□ -2.15
HLA-DQA1P01909 SNORA38-201ENST00000363946 132 ntBASIC1.65□□□□□ -2.15
HLA-DQA1P01909 RNU6-371P-201ENST00000364283 108 ntBASIC1.65□□□□□ -2.15
HLA-DQA1P01909 SNORA48.3-201ENST00000391081 134 ntBASIC1.65□□□□□ -2.15
HLA-DQA1P01909 ZNF705D-201ENST00000400078 925 ntAPPRIS P1 TSL 2 BASIC1.65□□□□□ -2.15
HLA-DQA1P01909 RPS4XP8-201ENST00000402039 771 ntBASIC1.65□□□□□ -2.15
HLA-DQA1P01909 AC083867.1-201ENST00000413567 457 ntTSL 3 BASIC1.65□□□□□ -2.15
HLA-DQA1P01909 AC104777.3-201ENST00000416350 545 ntTSL 3 BASIC1.65□□□□□ -2.15
HLA-DQA1P01909 LINC01065-201ENST00000417989 577 ntTSL 3 BASIC1.65□□□□□ -2.15
HLA-DQA1P01909 AC009299.3-201ENST00000421122 1072 ntTSL 3 BASIC1.65□□□□□ -2.15
HLA-DQA1P01909 AC003685.2-201ENST00000422795 395 ntBASIC1.65□□□□□ -2.15
HLA-DQA1P01909 RPS3AP44-201ENST00000425466 790 ntBASIC1.65□□□□□ -2.15
HLA-DQA1P01909 OPA1-AS1-201ENST00000433105 492 ntTSL 3 BASIC1.65□□□□□ -2.15
HLA-DQA1P01909 AL451074.3-201ENST00000437709 472 ntBASIC1.65□□□□□ -2.15
HLA-DQA1P01909 AC073614.1-201ENST00000438690 650 ntBASIC1.65□□□□□ -2.15
HLA-DQA1P01909 HIGD1AP2-201ENST00000446367 280 ntBASIC1.65□□□□□ -2.15
HLA-DQA1P01909 AL157882.1-201ENST00000447148 429 ntTSL 3 BASIC1.65□□□□□ -2.15
HLA-DQA1P01909 AL109933.2-201ENST00000452651 260 ntBASIC1.65□□□□□ -2.15
HLA-DQA1P01909 AL033528.1-201ENST00000453780 140 ntBASIC1.65□□□□□ -2.15
HLA-DQA1P01909 SNRPGP9-201ENST00000456025 225 ntBASIC1.65□□□□□ -2.15
HLA-DQA1P01909 AL441985.1-201ENST00000457727 251 ntBASIC1.65□□□□□ -2.15
HLA-DQA1P01909 AC117462.1-201ENST00000461186 554 ntTSL 4 BASIC1.65□□□□□ -2.15
HLA-DQA1P01909 AP001486.1-201ENST00000463339 476 ntBASIC1.65□□□□□ -2.15
HLA-DQA1P01909 AC126389.1-201ENST00000477436 290 ntBASIC1.65□□□□□ -2.15
HLA-DQA1P01909 AC004924.1-201ENST00000480160 781 ntBASIC1.65□□□□□ -2.15
HLA-DQA1P01909 AL139147.1-201ENST00000502413 1156 ntTSL 2 BASIC1.65□□□□□ -2.15
HLA-DQA1P01909 LINC02064-202ENST00000507876 403 ntTSL 5 BASIC1.65□□□□□ -2.15
HLA-DQA1P01909 RNA5SP24-201ENST00000516478 95 ntBASIC1.65□□□□□ -2.15
HLA-DQA1P01909 RNU5B-3P-201ENST00000516601 115 ntBASIC1.65□□□□□ -2.15
HLA-DQA1P01909 Vault.3-201ENST00000516676 95 ntBASIC1.65□□□□□ -2.15
HLA-DQA1P01909 AC109329.2-201ENST00000519658 482 ntBASIC1.65□□□□□ -2.15
HLA-DQA1P01909 AC069120.1-201ENST00000521623 379 ntTSL 3 BASIC1.65□□□□□ -2.15
HLA-DQA1P01909 AC239802.1-201ENST00000531288 406 ntTSL 5 BASIC1.65□□□□□ -2.15
HLA-DQA1P01909 AC087883.1-201ENST00000551882 391 ntBASIC1.65□□□□□ -2.15
HLA-DQA1P01909 AL442163.1-201ENST00000557251 515 ntTSL 5 BASIC1.65□□□□□ -2.15
HLA-DQA1P01909 LINC01491-201ENST00000558434 505 ntTSL 3 BASIC1.65□□□□□ -2.15
HLA-DQA1P01909 AC012435.2-201ENST00000562869 361 ntTSL 3 BASIC1.65□□□□□ -2.15
HLA-DQA1P01909 ZNF788-206ENST00000596883 692 ntTSL 3 BASIC1.65□□□□□ -2.15
HLA-DQA1P01909 AC009314.1-201ENST00000603871 304 ntBASIC1.65□□□□□ -2.15
HLA-DQA1P01909 AL670379.4-201ENST00000605279 254 ntBASIC1.65□□□□□ -2.15
HLA-DQA1P01909 AC005696.2-201ENST00000610120 626 ntTSL 3 BASIC1.65□□□□□ -2.15
HLA-DQA1P01909 MIR6817-201ENST00000615588 66 ntBASIC1.65□□□□□ -2.15
HLA-DQA1P01909 AC009233.1-201ENST00000616477 371 ntBASIC1.65□□□□□ -2.15
HLA-DQA1P01909 AC108479.2-201ENST00000617314 601 ntBASIC1.65□□□□□ -2.15
HLA-DQA1P01909 AC009831.4-201ENST00000620744 325 ntBASIC1.65□□□□□ -2.15
HLA-DQA1P01909 AC025034.2-201ENST00000623264 286 ntBASIC1.65□□□□□ -2.15
HLA-DQA1P01909 AC093648.1-201ENST00000623546 606 ntBASIC1.65□□□□□ -2.15
HLA-DQA1P01909 AC244517.12-201ENST00000623581 663 ntBASIC1.65□□□□□ -2.15
HLA-DQA1P01909 SCARNA15.3-201ENST00000626315 122 ntBASIC1.65□□□□□ -2.15
HLA-DQA1P01909 SCARNA4.1-201ENST00000628597 123 ntBASIC1.65□□□□□ -2.15
HLA-DQA1P01909 MIR203B-201ENST00000636080 86 ntBASIC1.65□□□□□ -2.15
HLA-DQA1P01909 HSPA8P4-201ENST00000511877 1920 ntBASIC1.65□□□□□ -2.15
HLA-DQA1P01909 CAPS2-203ENST00000393284 3430 ntAPPRIS P1 TSL 1 (best) BASIC1.65□□□□□ -2.15
HLA-DQA1P01909 LINC01592-202ENST00000518540 2367 ntTSL 2 BASIC1.65□□□□□ -2.15
HLA-DQA1P01909 CSNK1G3-202ENST00000360683 4047 ntAPPRIS ALT2 TSL 1 (best) BASIC1.65□□□□□ -2.15
HLA-DQA1P01909 DYNC2H1-203ENST00000398093 12945 ntAPPRIS P3 TSL 5 BASIC1.65□□□□□ -2.15
HLA-DQA1P01909 VPS54-202ENST00000354504 3594 ntTSL 1 (best) BASIC1.64□□□□□ -2.15
HLA-DQA1P01909 MIR412-201ENST00000362142 91 ntBASIC1.64□□□□□ -2.15
HLA-DQA1P01909 RNU6-858P-201ENST00000362436 107 ntBASIC1.64□□□□□ -2.15
HLA-DQA1P01909 RNU6-942P-201ENST00000363002 107 ntBASIC1.64□□□□□ -2.15
HLA-DQA1P01909 RNU6-384P-201ENST00000364900 104 ntBASIC1.64□□□□□ -2.15
HLA-DQA1P01909 RNU6-1179P-201ENST00000384667 107 ntBASIC1.64□□□□□ -2.15
HLA-DQA1P01909 RNY3P10-201ENST00000384764 102 ntBASIC1.64□□□□□ -2.15
HLA-DQA1P01909 RNA5SP111-201ENST00000411386 101 ntBASIC1.64□□□□□ -2.15
HLA-DQA1P01909 AC107081.1-201ENST00000414975 361 ntBASIC1.64□□□□□ -2.15
HLA-DQA1P01909 AL160272.1-201ENST00000421509 521 ntTSL 3 BASIC1.64□□□□□ -2.15
HLA-DQA1P01909 LINC01817-201ENST00000429317 564 ntTSL 4 BASIC1.64□□□□□ -2.15
HLA-DQA1P01909 AC112518.1-201ENST00000436089 575 ntTSL 4 BASIC1.64□□□□□ -2.15
HLA-DQA1P01909 AC093639.1-201ENST00000441026 473 ntTSL 2 BASIC1.64□□□□□ -2.15
HLA-DQA1P01909 RPL7P12-201ENST00000446719 750 ntBASIC1.64□□□□□ -2.15
HLA-DQA1P01909 AC104688.1-201ENST00000447158 419 ntTSL 3 BASIC1.64□□□□□ -2.15
HLA-DQA1P01909 AL049873.1-201ENST00000480540 376 ntBASIC1.64□□□□□ -2.15
HLA-DQA1P01909 FSBP-201ENST00000481490 1158 ntTSL 1 (best) BASIC1.64□□□□□ -2.15
HLA-DQA1P01909 RN7SL274P-201ENST00000492268 272 ntBASIC1.64□□□□□ -2.15
HLA-DQA1P01909 RPL22P13-201ENST00000493291 347 ntBASIC1.64□□□□□ -2.15
HLA-DQA1P01909 AC116562.3-201ENST00000506136 177 ntBASIC1.64□□□□□ -2.15
HLA-DQA1P01909 LINC02174-201ENST00000508977 553 ntTSL 3 BASIC1.64□□□□□ -2.15
HLA-DQA1P01909 RNA5SP148-201ENST00000516527 94 ntBASIC1.64□□□□□ -2.15
HLA-DQA1P01909 AP005902.1-201ENST00000521358 186 ntBASIC1.64□□□□□ -2.15
HLA-DQA1P01909 AC008662.2-201ENST00000522426 389 ntTSL 5 BASIC1.64□□□□□ -2.15
HLA-DQA1P01909 AC068587.5-201ENST00000528506 175 ntBASIC1.64□□□□□ -2.15
HLA-DQA1P01909 HOMER1-205ENST00000535690 642 ntTSL 1 (best) BASIC1.64□□□□□ -2.15
HLA-DQA1P01909 AC079598.5-201ENST00000547460 117 ntBASIC1.64□□□□□ -2.15
HLA-DQA1P01909 POC1B-211ENST00000549504 581 ntTSL 5 BASIC1.64□□□□□ -2.15
HLA-DQA1P01909 MTND3P12-201ENST00000559068 328 ntBASIC1.64□□□□□ -2.15
HLA-DQA1P01909 AC016987.2-201ENST00000560696 351 ntTSL 3 BASIC1.64□□□□□ -2.15
HLA-DQA1P01909 LINC01195-201ENST00000570118 451 ntTSL 3 BASIC1.64□□□□□ -2.15
HLA-DQA1P01909 AC137800.2-201ENST00000574375 120 ntBASIC1.64□□□□□ -2.15
HLA-DQA1P01909 AP005062.1-201ENST00000581502 607 ntTSL 3 BASIC1.64□□□□□ -2.15
HLA-DQA1P01909 MIR5007-201ENST00000583098 95 ntBASIC1.64□□□□□ -2.15
HLA-DQA1P01909 MIR548AC-201ENST00000585049 88 ntBASIC1.64□□□□□ -2.15
HLA-DQA1P01909 NIFKP6-201ENST00000598115 845 ntBASIC1.64□□□□□ -2.15
HLA-DQA1P01909 CLIC4P2-201ENST00000601934 717 ntBASIC1.64□□□□□ -2.15
HLA-DQA1P01909 AC068276.1-201ENST00000605793 379 ntBASIC1.64□□□□□ -2.15
Retrieved 100 of 98,524 protein–RNA pairs in 102.1 ms