Protein–RNA interactions for Protein: O43364

HOXA2, Homeobox protein Hox-A2, humanhuman

Predictions only

Length 376 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HOXA2O43364 SAMSN1-201ENST00000285670 2185 ntTSL 1 (best) BASIC5.19□□□□□ -1.58
HOXA2O43364 DNAAF4-CCPG1-201ENST00000565113 4589 ntTSL 2 BASIC5.19□□□□□ -1.58
HOXA2O43364 RANBP3L-201ENST00000296604 3104 ntAPPRIS P3 TSL 1 (best) BASIC5.19□□□□□ -1.58
HOXA2O43364 AL450345.1-202ENST00000605741 3881 ntBASIC5.19□□□□□ -1.58
HOXA2O43364 DDX20-202ENST00000475700 4332 ntTSL 2 BASIC5.18□□□□□ -1.58
HOXA2O43364 RAB23-201ENST00000317483 2546 ntAPPRIS P1 TSL 1 (best) BASIC5.18□□□□□ -1.58
HOXA2O43364 AC242426.3-202ENST00000607149 2397 ntTSL 5 BASIC5.18□□□□□ -1.58
HOXA2O43364 RNU1-108P-201ENST00000362556 161 ntBASIC5.18□□□□□ -1.58
HOXA2O43364 AL512633.1-201ENST00000399931 655 ntBASIC5.18□□□□□ -1.58
HOXA2O43364 RNU2-54P-201ENST00000410299 190 ntBASIC5.18□□□□□ -1.58
HOXA2O43364 RPL23AP1-201ENST00000428990 471 ntBASIC5.18□□□□□ -1.58
HOXA2O43364 RNU6-971P-201ENST00000516920 106 ntBASIC5.18□□□□□ -1.58
HOXA2O43364 AC006206.2-202ENST00000537714 648 ntTSL 5 BASIC5.18□□□□□ -1.58
HOXA2O43364 AC006349.1-201ENST00000555526 235 ntBASIC5.18□□□□□ -1.58
HOXA2O43364 AC087500.2-201ENST00000575056 498 ntTSL 5 BASIC5.18□□□□□ -1.58
HOXA2O43364 LINC00904-201ENST00000604453 471 ntTSL 2 BASIC5.18□□□□□ -1.58
HOXA2O43364 FTX_3.1-201ENST00000610451 147 ntBASIC5.18□□□□□ -1.58
HOXA2O43364 MIR6134-201ENST00000617606 109 ntBASIC5.18□□□□□ -1.58
HOXA2O43364 OR4C16-201ENST00000623907 933 ntAPPRIS P1 BASIC5.18□□□□□ -1.58
HOXA2O43364 U2.21-201ENST00000637295 81 ntBASIC5.18□□□□□ -1.58
HOXA2O43364 GABRG2-214ENST00000639111 11735 ntAPPRIS P1 TSL 1 (best) BASIC5.18□□□□□ -1.58
HOXA2O43364 WASHC4-214ENST00000620430 5807 ntAPPRIS ALT1 TSL 1 (best) BASIC5.18□□□□□ -1.58
HOXA2O43364 ZNF660-201ENST00000322734 5834 ntAPPRIS P1 TSL 2 BASIC5.18□□□□□ -1.58
HOXA2O43364 ELAVL2-202ENST00000380110 3691 ntTSL 5 BASIC5.18□□□□□ -1.58
HOXA2O43364 SRRM1-203ENST00000447431 3691 ntAPPRIS ALT2 TSL 5 BASIC5.18□□□□□ -1.58
HOXA2O43364 PIGN-242ENST00000640145 4505 ntAPPRIS P1 TSL 5 BASIC5.18□□□□□ -1.58
HOXA2O43364 LINC00276-202ENST00000418420 3503 ntTSL 1 (best) BASIC5.18□□□□□ -1.58
HOXA2O43364 R3HDM1-202ENST00000409478 4272 ntTSL 1 (best) BASIC5.17□□□□□ -1.58
HOXA2O43364 FBXL13-204ENST00000436908 2577 ntTSL 5 BASIC5.17□□□□□ -1.58
HOXA2O43364 CYLD-212ENST00000568704 3292 ntTSL 5 BASIC5.17□□□□□ -1.58
HOXA2O43364 TLK1P1-201ENST00000456760 2440 ntBASIC5.17□□□□□ -1.58
HOXA2O43364 P2RY13-201ENST00000325602 2764 ntAPPRIS P1 TSL 1 (best) BASIC5.17□□□□□ -1.58
HOXA2O43364 OR56B2P-202ENST00000641377 2453 ntBASIC5.17□□□□□ -1.58
HOXA2O43364 AC092821.1-204ENST00000518709 3552 ntTSL 5 BASIC5.17□□□□□ -1.58
HOXA2O43364 N4BP2L2-204ENST00000399396 2872 ntTSL 5 BASIC5.17□□□□□ -1.58
HOXA2O43364 ANO6-205ENST00000441606 5955 ntAPPRIS ALT2 TSL 1 (best) BASIC5.17□□□□□ -1.58
HOXA2O43364 ZNF559-201ENST00000317221 2732 ntTSL 2 BASIC5.17□□□□□ -1.58
HOXA2O43364 LINC00583-201ENST00000381010 387 ntTSL 2 BASIC5.17□□□□□ -1.58
HOXA2O43364 SNORD116-14-201ENST00000383894 92 ntBASIC5.17□□□□□ -1.58
HOXA2O43364 SNORD116-17-201ENST00000383929 92 ntBASIC5.17□□□□□ -1.58
HOXA2O43364 RNU6-793P-201ENST00000384233 104 ntBASIC5.17□□□□□ -1.58
HOXA2O43364 SNORD116-15-201ENST00000384445 92 ntBASIC5.17□□□□□ -1.58
HOXA2O43364 SNORD116-19-201ENST00000384729 92 ntBASIC5.17□□□□□ -1.58
HOXA2O43364 AC244670.1-201ENST00000436879 112 ntBASIC5.17□□□□□ -1.58
HOXA2O43364 AC003988.1-201ENST00000447198 578 ntTSL 5 BASIC5.17□□□□□ -1.58
HOXA2O43364 AC091868.1-201ENST00000508746 304 ntBASIC5.17□□□□□ -1.58
HOXA2O43364 TMEM132D-AS1-202ENST00000510001 293 ntTSL 1 (best) BASIC5.17□□□□□ -1.58
HOXA2O43364 RNU7-121P-201ENST00000516604 62 ntBASIC5.17□□□□□ -1.58
HOXA2O43364 AC015468.4-201ENST00000523496 568 ntTSL 4 BASIC5.17□□□□□ -1.58
HOXA2O43364 RGS5-206ENST00000527988 373 ntTSL 1 (best) BASIC5.17□□□□□ -1.58
HOXA2O43364 AC100767.1-201ENST00000528178 123 ntBASIC5.17□□□□□ -1.58
HOXA2O43364 TOMM20P2-201ENST00000540082 421 ntBASIC5.17□□□□□ -1.58
HOXA2O43364 PARP1P2-201ENST00000556806 195 ntBASIC5.17□□□□□ -1.58
HOXA2O43364 RPL38-208ENST00000584577 344 ntAPPRIS ALT1 TSL 3 BASIC5.17□□□□□ -1.58
HOXA2O43364 AC005255.1-201ENST00000593748 216 ntBASIC5.17□□□□□ -1.58
HOXA2O43364 AL356218.2-201ENST00000605264 187 ntBASIC5.17□□□□□ -1.58
HOXA2O43364 U91328.3-201ENST00000608931 354 ntTSL 3 BASIC5.17□□□□□ -1.58
HOXA2O43364 AL022401.1-201ENST00000619498 108 ntBASIC5.17□□□□□ -1.58
HOXA2O43364 MIR6758-201ENST00000620653 63 ntBASIC5.17□□□□□ -1.58
HOXA2O43364 ZEB2_AS1_1.1-201ENST00000621504 128 ntBASIC5.17□□□□□ -1.58
HOXA2O43364 SLC4A10-206ENST00000446997 5551 ntAPPRIS P4 TSL 1 (best) BASIC5.17□□□□□ -1.58
HOXA2O43364 SLMAP-206ENST00000428312 4132 ntTSL 1 (best) BASIC5.17□□□□□ -1.58
HOXA2O43364 ZBTB25-201ENST00000394715 2094 ntAPPRIS P1 TSL 2 BASIC5.17□□□□□ -1.58
HOXA2O43364 GABRA1-220ENST00000638159 4088 ntTSL 5 BASIC5.17□□□□□ -1.58
HOXA2O43364 KMO-204ENST00000366559 5261 ntAPPRIS P2 TSL 1 (best) BASIC5.17□□□□□ -1.58
HOXA2O43364 ANKRD30BP1-201ENST00000451052 2186 ntBASIC5.16□□□□□ -1.58
HOXA2O43364 ZNF678-202ENST00000397097 8212 ntAPPRIS P1 TSL 1 (best) BASIC5.16□□□□□ -1.58
HOXA2O43364 ARHGAP42-203ENST00000524892 5685 ntTSL 5 BASIC5.16□□□□□ -1.58
HOXA2O43364 RIMS2-205ENST00000436393 4384 ntTSL 2 BASIC5.16□□□□□ -1.58
HOXA2O43364 ZBTB38-201ENST00000321464 3588 ntAPPRIS P1 BASIC5.16□□□□□ -1.58
HOXA2O43364 C5-201ENST00000223642 5465 ntAPPRIS P1 TSL 1 (best) BASIC5.16□□□□□ -1.58
HOXA2O43364 RNU6-778P-201ENST00000363269 103 ntBASIC5.16□□□□□ -1.58
HOXA2O43364 RNU6-1285P-201ENST00000363480 105 ntBASIC5.16□□□□□ -1.58
HOXA2O43364 Y_RNA.218-201ENST00000364218 104 ntBASIC5.16□□□□□ -1.58
HOXA2O43364 RNU1-73P-201ENST00000383971 164 ntBASIC5.16□□□□□ -1.58
HOXA2O43364 RNU6ATAC19P-201ENST00000408096 110 ntBASIC5.16□□□□□ -1.58
HOXA2O43364 RNU6-1199P-201ENST00000411249 104 ntBASIC5.16□□□□□ -1.58
HOXA2O43364 MTND4LP9-201ENST00000427694 174 ntBASIC5.16□□□□□ -1.58
HOXA2O43364 AF064858.2-201ENST00000440714 292 ntTSL 3 BASIC5.16□□□□□ -1.58
HOXA2O43364 AC074290.1-201ENST00000448883 135 ntBASIC5.16□□□□□ -1.58
HOXA2O43364 AC107027.2-201ENST00000512197 115 ntBASIC5.16□□□□□ -1.58
HOXA2O43364 RN7SKP164-201ENST00000516138 266 ntBASIC5.16□□□□□ -1.58
HOXA2O43364 SNORA25.12-201ENST00000516202 82 ntBASIC5.16□□□□□ -1.58
HOXA2O43364 AC113192.5-201ENST00000528779 486 ntTSL 2 BASIC5.16□□□□□ -1.58
HOXA2O43364 AP002004.1-207ENST00000531371 526 ntTSL 1 (best) BASIC5.16□□□□□ -1.58
HOXA2O43364 AF099810.1-201ENST00000554219 525 ntTSL 3 BASIC5.16□□□□□ -1.58
HOXA2O43364 MIR4277-201ENST00000578298 84 ntBASIC5.16□□□□□ -1.58
HOXA2O43364 MIR4431-201ENST00000579990 94 ntBASIC5.16□□□□□ -1.58
HOXA2O43364 AC004825.2-201ENST00000616634 455 ntBASIC5.16□□□□□ -1.58
HOXA2O43364 LINC00283-201ENST00000430111 1947 ntTSL 5 BASIC5.16□□□□□ -1.58
HOXA2O43364 MMRN1-204ENST00000508372 3234 ntTSL 2 BASIC5.16□□□□□ -1.58
HOXA2O43364 SLC15A2-201ENST00000295605 2379 ntTSL 2 BASIC5.16□□□□□ -1.58
HOXA2O43364 RGS5-201ENST00000313961 5862 ntAPPRIS P3 TSL 1 (best) BASIC5.16□□□□□ -1.58
HOXA2O43364 AHNAK-202ENST00000378024 18787 ntAPPRIS P3 TSL 2 BASIC5.16□□□□□ -1.58
HOXA2O43364 OR56A1-202ENST00000641423 6096 ntAPPRIS P1 BASIC5.16□□□□□ -1.58
HOXA2O43364 SCN11A-203ENST00000456224 5262 ntAPPRIS ALT2 TSL 5 BASIC5.16□□□□□ -1.58
HOXA2O43364 INTS6-220ENST00000497989 3022 ntTSL 2 BASIC5.15□□□□□ -1.58
HOXA2O43364 AC073073.2-201ENST00000609827 2578 ntBASIC5.15□□□□□ -1.58
HOXA2O43364 NBPF10-201ENST00000583866 13042 ntAPPRIS P1 TSL 5 BASIC5.15□□□□□ -1.58
HOXA2O43364 PEAK1-204ENST00000560626 19217 ntAPPRIS P1 TSL 5 BASIC5.15□□□□□ -1.58
Retrieved 100 of 98,524 protein–RNA pairs in 101.2 ms