Protein–RNA interactions for Protein: H3BSU7

TMX2-CTNND1, TMX2-CTNND1 readthrough (NMD candidate), humanhuman

Predictions only

Length 103 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TMX2-CTNND1H3BSU7 PLCZ1-209ENST00000539875 1398 ntTSL 1 (best) BASIC2.02□□□□□ -2.09
TMX2-CTNND1H3BSU7 AL596028.1-201ENST00000326971 197 ntBASIC2.02□□□□□ -2.09
TMX2-CTNND1H3BSU7 COMMD6-201ENST00000355801 486 ntTSL 2 BASIC2.02□□□□□ -2.09
TMX2-CTNND1H3BSU7 Y_RNA.201-201ENST00000364052 96 ntBASIC2.02□□□□□ -2.09
TMX2-CTNND1H3BSU7 RNU4-24P-201ENST00000364565 139 ntBASIC2.02□□□□□ -2.09
TMX2-CTNND1H3BSU7 RNU6-946P-201ENST00000383878 107 ntBASIC2.02□□□□□ -2.09
TMX2-CTNND1H3BSU7 RNU6-74P-201ENST00000384235 107 ntBASIC2.02□□□□□ -2.09
TMX2-CTNND1H3BSU7 RNU6-140P-201ENST00000384566 108 ntBASIC2.02□□□□□ -2.09
TMX2-CTNND1H3BSU7 MIR558-201ENST00000384920 94 ntBASIC2.02□□□□□ -2.09
TMX2-CTNND1H3BSU7 AL355497.1-201ENST00000406262 551 ntBASIC2.02□□□□□ -2.09
TMX2-CTNND1H3BSU7 AC092809.3-201ENST00000415453 231 ntBASIC2.02□□□□□ -2.09
TMX2-CTNND1H3BSU7 AC002456.1-201ENST00000415965 317 ntTSL 5 BASIC2.02□□□□□ -2.09
TMX2-CTNND1H3BSU7 BX295541.1-201ENST00000417774 250 ntBASIC2.02□□□□□ -2.09
TMX2-CTNND1H3BSU7 LINC01780-201ENST00000420059 442 ntTSL 2 BASIC2.02□□□□□ -2.09
TMX2-CTNND1H3BSU7 RAC1P6-201ENST00000423911 575 ntBASIC2.02□□□□□ -2.09
TMX2-CTNND1H3BSU7 AL157884.2-201ENST00000424177 551 ntTSL 3 BASIC2.02□□□□□ -2.09
TMX2-CTNND1H3BSU7 SKA2P1-201ENST00000425592 390 ntBASIC2.02□□□□□ -2.09
TMX2-CTNND1H3BSU7 RPL31P35-201ENST00000431058 377 ntBASIC2.02□□□□□ -2.09
TMX2-CTNND1H3BSU7 AL080284.1-201ENST00000434493 442 ntTSL 2 BASIC2.02□□□□□ -2.09
TMX2-CTNND1H3BSU7 AC073614.1-201ENST00000438690 650 ntBASIC2.02□□□□□ -2.09
TMX2-CTNND1H3BSU7 KATNBL1P3-201ENST00000443475 909 ntBASIC2.02□□□□□ -2.09
TMX2-CTNND1H3BSU7 AL358075.2-201ENST00000452785 339 ntTSL 2 BASIC2.02□□□□□ -2.09
TMX2-CTNND1H3BSU7 CECR9-201ENST00000453421 199 ntBASIC2.02□□□□□ -2.09
TMX2-CTNND1H3BSU7 RPL12P25-201ENST00000455592 494 ntBASIC2.02□□□□□ -2.09
TMX2-CTNND1H3BSU7 AC090515.1-201ENST00000465295 476 ntBASIC2.02□□□□□ -2.09
TMX2-CTNND1H3BSU7 C1orf112-206ENST00000472795 925 ntAPPRIS ALT2 TSL 2 BASIC2.02□□□□□ -2.09
TMX2-CTNND1H3BSU7 AC090096.1-201ENST00000489168 390 ntBASIC2.02□□□□□ -2.09
TMX2-CTNND1H3BSU7 AC007182.2-201ENST00000489251 402 ntBASIC2.02□□□□□ -2.09
TMX2-CTNND1H3BSU7 SUMO2P6-201ENST00000505273 288 ntBASIC2.02□□□□□ -2.09
TMX2-CTNND1H3BSU7 LINC02101-201ENST00000505861 725 ntTSL 4 BASIC2.02□□□□□ -2.09
TMX2-CTNND1H3BSU7 MTND4P2-201ENST00000507767 1203 ntBASIC2.02□□□□□ -2.09
TMX2-CTNND1H3BSU7 RNA5SP458-201ENST00000516188 119 ntBASIC2.02□□□□□ -2.09
TMX2-CTNND1H3BSU7 RNU2-10P-201ENST00000516375 211 ntBASIC2.02□□□□□ -2.09
TMX2-CTNND1H3BSU7 SNORA31.18-201ENST00000517043 134 ntBASIC2.02□□□□□ -2.09
TMX2-CTNND1H3BSU7 AC087439.1-201ENST00000517920 398 ntTSL 3 BASIC2.02□□□□□ -2.09
TMX2-CTNND1H3BSU7 BTF3P12-201ENST00000519620 469 ntBASIC2.02□□□□□ -2.09
TMX2-CTNND1H3BSU7 HTN3-202ENST00000526767 578 ntAPPRIS P2 TSL 1 (best) BASIC2.02□□□□□ -2.09
TMX2-CTNND1H3BSU7 SNHG1-210ENST00000539303 240 ntTSL 3 BASIC2.02□□□□□ -2.09
TMX2-CTNND1H3BSU7 AC009135.1-201ENST00000549303 776 ntTSL 2 BASIC2.02□□□□□ -2.09
TMX2-CTNND1H3BSU7 AC090049.1-201ENST00000551075 1011 ntTSL 3 BASIC2.02□□□□□ -2.09
TMX2-CTNND1H3BSU7 AC012378.1-201ENST00000561155 364 ntTSL 3 BASIC2.02□□□□□ -2.09
TMX2-CTNND1H3BSU7 AC012213.3-201ENST00000577199 777 ntBASIC2.02□□□□□ -2.09
TMX2-CTNND1H3BSU7 AC103987.3-201ENST00000582071 292 ntBASIC2.02□□□□□ -2.09
TMX2-CTNND1H3BSU7 AC100778.1-201ENST00000583579 332 ntTSL 3 BASIC2.02□□□□□ -2.09
TMX2-CTNND1H3BSU7 AC002545.1-201ENST00000592511 181 ntBASIC2.02□□□□□ -2.09
TMX2-CTNND1H3BSU7 APOOP1-201ENST00000604695 592 ntBASIC2.02□□□□□ -2.09
TMX2-CTNND1H3BSU7 AL121992.2-201ENST00000606262 256 ntBASIC2.02□□□□□ -2.09
TMX2-CTNND1H3BSU7 AC006566.1-201ENST00000608943 513 ntBASIC2.02□□□□□ -2.09
TMX2-CTNND1H3BSU7 AC009318.2-201ENST00000610917 651 ntBASIC2.02□□□□□ -2.09
TMX2-CTNND1H3BSU7 GPR171-203ENST00000617554 960 ntAPPRIS P1 BASIC2.02□□□□□ -2.09
TMX2-CTNND1H3BSU7 C4orf22-209ENST00000621014 228 ntTSL 3 BASIC2.02□□□□□ -2.09
TMX2-CTNND1H3BSU7 PTP4A2-219ENST00000626355 606 ntTSL 5 BASIC2.02□□□□□ -2.09
TMX2-CTNND1H3BSU7 MTND5P42-201ENST00000637720 498 ntBASIC2.02□□□□□ -2.09
TMX2-CTNND1H3BSU7 OR2L2-202ENST00000641771 4300 ntAPPRIS P1 BASIC2.01□□□□□ -2.09
TMX2-CTNND1H3BSU7 KERA-201ENST00000266719 2162 ntAPPRIS P1 TSL 1 (best) BASIC2.01□□□□□ -2.09
TMX2-CTNND1H3BSU7 UBE2L2-201ENST00000254302 429 ntBASIC2.01□□□□□ -2.09
TMX2-CTNND1H3BSU7 RNU6-1159P-201ENST00000362933 107 ntBASIC2.01□□□□□ -2.09
TMX2-CTNND1H3BSU7 RNU6-512P-201ENST00000364438 103 ntBASIC2.01□□□□□ -2.09
TMX2-CTNND1H3BSU7 Y_RNA.318-201ENST00000365131 97 ntBASIC2.01□□□□□ -2.09
TMX2-CTNND1H3BSU7 RNA5SP37-201ENST00000365420 130 ntBASIC2.01□□□□□ -2.09
TMX2-CTNND1H3BSU7 SNORA20.2-201ENST00000383922 131 ntBASIC2.01□□□□□ -2.09
TMX2-CTNND1H3BSU7 MIR583-201ENST00000384846 75 ntBASIC2.01□□□□□ -2.09
TMX2-CTNND1H3BSU7 U8.13-201ENST00000390842 128 ntBASIC2.01□□□□□ -2.09
TMX2-CTNND1H3BSU7 MRPL42P2-201ENST00000403169 426 ntBASIC2.01□□□□□ -2.09
TMX2-CTNND1H3BSU7 MRLN-201ENST00000414264 422 ntAPPRIS P2 TSL 1 (best) BASIC2.01□□□□□ -2.09
TMX2-CTNND1H3BSU7 AC009158.1-206ENST00000417476 454 ntTSL 3 BASIC2.01□□□□□ -2.09
TMX2-CTNND1H3BSU7 C1DP2-201ENST00000418167 426 ntBASIC2.01□□□□□ -2.09
TMX2-CTNND1H3BSU7 AL445123.1-201ENST00000422023 446 ntTSL 2 BASIC2.01□□□□□ -2.09
TMX2-CTNND1H3BSU7 AL365338.1-201ENST00000422282 858 ntBASIC2.01□□□□□ -2.09
TMX2-CTNND1H3BSU7 LINC01724-201ENST00000430519 621 ntTSL 3 BASIC2.01□□□□□ -2.09
TMX2-CTNND1H3BSU7 MTCO3P5-201ENST00000433620 714 ntBASIC2.01□□□□□ -2.09
TMX2-CTNND1H3BSU7 MTATP6P16-201ENST00000434543 526 ntBASIC2.01□□□□□ -2.09
TMX2-CTNND1H3BSU7 HMGB1P18-201ENST00000438801 619 ntBASIC2.01□□□□□ -2.09
TMX2-CTNND1H3BSU7 NEFMP1-201ENST00000443423 1006 ntBASIC2.01□□□□□ -2.09
TMX2-CTNND1H3BSU7 snoU13.28-201ENST00000459235 104 ntBASIC2.01□□□□□ -2.09
TMX2-CTNND1H3BSU7 AL160314.1-201ENST00000490836 438 ntBASIC2.01□□□□□ -2.09
TMX2-CTNND1H3BSU7 MTND2P33-201ENST00000506452 1031 ntBASIC2.01□□□□□ -2.09
TMX2-CTNND1H3BSU7 MTCO3P7-201ENST00000510008 774 ntBASIC2.01□□□□□ -2.09
TMX2-CTNND1H3BSU7 AC091133.4-201ENST00000511142 308 ntBASIC2.01□□□□□ -2.09
TMX2-CTNND1H3BSU7 Vault.3-201ENST00000516676 95 ntBASIC2.01□□□□□ -2.09
TMX2-CTNND1H3BSU7 MIR514B-201ENST00000516774 80 ntBASIC2.01□□□□□ -2.09
TMX2-CTNND1H3BSU7 RNU6-430P-201ENST00000517078 107 ntBASIC2.01□□□□□ -2.09
TMX2-CTNND1H3BSU7 SMIM18-201ENST00000517349 905 ntAPPRIS P1 TSL 2 BASIC2.01□□□□□ -2.09
TMX2-CTNND1H3BSU7 MTCO2P4-201ENST00000517968 247 ntBASIC2.01□□□□□ -2.09
TMX2-CTNND1H3BSU7 LINC02350-201ENST00000544419 480 ntTSL 3 BASIC2.01□□□□□ -2.09
TMX2-CTNND1H3BSU7 AL352955.1-201ENST00000555490 332 ntTSL 3 BASIC2.01□□□□□ -2.09
TMX2-CTNND1H3BSU7 AL391261.3-201ENST00000557194 520 ntBASIC2.01□□□□□ -2.09
TMX2-CTNND1H3BSU7 AC138625.1-201ENST00000567556 483 ntTSL 3 BASIC2.01□□□□□ -2.09
TMX2-CTNND1H3BSU7 AC005304.3-201ENST00000581533 511 ntTSL 3 BASIC2.01□□□□□ -2.09
TMX2-CTNND1H3BSU7 LINC01897-203ENST00000591503 369 ntTSL 2 BASIC2.01□□□□□ -2.09
TMX2-CTNND1H3BSU7 ZNF616-202ENST00000596290 568 ntTSL 4 BASIC2.01□□□□□ -2.09
TMX2-CTNND1H3BSU7 ZNF788-206ENST00000596883 692 ntTSL 3 BASIC2.01□□□□□ -2.09
TMX2-CTNND1H3BSU7 AL022154.1-201ENST00000604698 785 ntBASIC2.01□□□□□ -2.09
TMX2-CTNND1H3BSU7 AC068544.1-201ENST00000635064 248 ntTSL 5 BASIC2.01□□□□□ -2.09
TMX2-CTNND1H3BSU7 ATM-230ENST00000640388 578 ntTSL 5 BASIC2.01□□□□□ -2.09
TMX2-CTNND1H3BSU7 PICALM-209ENST00000528398 2049 ntTSL 2 BASIC2.01□□□□□ -2.09
TMX2-CTNND1H3BSU7 KPNA2P1-201ENST00000458289 1591 ntBASIC2.01□□□□□ -2.09
TMX2-CTNND1H3BSU7 LIPI-203ENST00000536861 1529 ntAPPRIS ALT2 TSL 1 (best) BASIC2.01□□□□□ -2.09
TMX2-CTNND1H3BSU7 ATP13A3-201ENST00000256031 7322 ntAPPRIS P1 TSL 5 BASIC2.01□□□□□ -2.09
TMX2-CTNND1H3BSU7 AC131280.1-202ENST00000624067 4211 ntBASIC2□□□□□ -2.09
Retrieved 100 of 98,524 protein–RNA pairs in 149 ms