Protein–RNA interactions for Protein: Q9Y6Q1

CAPN6, Calpain-6, humanhuman

Predictions only

Length 641 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN6Q9Y6Q1 AC024940.4-201ENST00000605507 246 ntBASIC4.22□□□□□ -1.73
CAPN6Q9Y6Q1 AC005046.1-201ENST00000608515 625 ntBASIC4.22□□□□□ -1.73
CAPN6Q9Y6Q1 AC006065.5-201ENST00000623427 349 ntBASIC4.22□□□□□ -1.73
CAPN6Q9Y6Q1 AC127459.3-201ENST00000624328 466 ntBASIC4.22□□□□□ -1.73
CAPN6Q9Y6Q1 MRE11-202ENST00000323977 2588 ntTSL 1 (best) BASIC4.22□□□□□ -1.73
CAPN6Q9Y6Q1 TAOK3-202ENST00000419821 4301 ntAPPRIS P1 TSL 1 (best) BASIC4.22□□□□□ -1.73
CAPN6Q9Y6Q1 LIG4-201ENST00000356922 4096 ntAPPRIS P1 TSL 1 (best) BASIC4.22□□□□□ -1.73
CAPN6Q9Y6Q1 AC018462.1-201ENST00000425966 1684 ntTSL 1 (best) BASIC4.22□□□□□ -1.73
CAPN6Q9Y6Q1 GABRG2-213ENST00000639046 3058 ntTSL 5 BASIC4.22□□□□□ -1.73
CAPN6Q9Y6Q1 NEGR1-201ENST00000306821 5577 ntTSL 1 (best) BASIC4.21□□□□□ -1.73
CAPN6Q9Y6Q1 MME-201ENST00000360490 2360 ntAPPRIS P1 TSL 1 (best) BASIC4.21□□□□□ -1.73
CAPN6Q9Y6Q1 MBNL1-224ENST00000545754 5147 ntTSL 5 BASIC4.21□□□□□ -1.74
CAPN6Q9Y6Q1 ZNF480-202ENST00000335090 2722 ntTSL 3 BASIC4.21□□□□□ -1.74
CAPN6Q9Y6Q1 RNU6-227P-201ENST00000362865 103 ntBASIC4.21□□□□□ -1.74
CAPN6Q9Y6Q1 RNU6-428P-201ENST00000362942 107 ntBASIC4.21□□□□□ -1.74
CAPN6Q9Y6Q1 RNA5SP399-201ENST00000364003 117 ntBASIC4.21□□□□□ -1.74
CAPN6Q9Y6Q1 RNA5SP235-201ENST00000365411 114 ntBASIC4.21□□□□□ -1.74
CAPN6Q9Y6Q1 RNU6-662P-201ENST00000384253 104 ntBASIC4.21□□□□□ -1.74
CAPN6Q9Y6Q1 MIR34A-201ENST00000385130 110 ntBASIC4.21□□□□□ -1.74
CAPN6Q9Y6Q1 Z85995.1-201ENST00000415547 335 ntBASIC4.21□□□□□ -1.74
CAPN6Q9Y6Q1 AL445305.1-201ENST00000432577 575 ntBASIC4.21□□□□□ -1.74
CAPN6Q9Y6Q1 AC112715.1-201ENST00000445534 350 ntTSL 3 BASIC4.21□□□□□ -1.74
CAPN6Q9Y6Q1 RPS29P27-201ENST00000463711 170 ntBASIC4.21□□□□□ -1.74
CAPN6Q9Y6Q1 RNU7-175P-201ENST00000515915 61 ntBASIC4.21□□□□□ -1.74
CAPN6Q9Y6Q1 SCARNA24.2-201ENST00000516968 130 ntBASIC4.21□□□□□ -1.74
CAPN6Q9Y6Q1 AC025755.1-201ENST00000521306 278 ntBASIC4.21□□□□□ -1.74
CAPN6Q9Y6Q1 HIGD1AP5-201ENST00000529959 259 ntBASIC4.21□□□□□ -1.74
CAPN6Q9Y6Q1 AC005476.1-201ENST00000554427 397 ntBASIC4.21□□□□□ -1.74
CAPN6Q9Y6Q1 AC023575.1-201ENST00000580510 358 ntBASIC4.21□□□□□ -1.74
CAPN6Q9Y6Q1 AC234771.5-201ENST00000600161 514 ntBASIC4.21□□□□□ -1.74
CAPN6Q9Y6Q1 B3GNTL1P2-201ENST00000603673 288 ntBASIC4.21□□□□□ -1.74
CAPN6Q9Y6Q1 NDST4-201ENST00000264363 3351 ntAPPRIS P1 TSL 1 (best) BASIC4.21□□□□□ -1.74
CAPN6Q9Y6Q1 RBBP6-203ENST00000381039 3384 ntTSL 1 (best) BASIC4.21□□□□□ -1.74
CAPN6Q9Y6Q1 ACSM3-201ENST00000289416 2845 ntAPPRIS P1 TSL 1 (best) BASIC4.21□□□□□ -1.74
CAPN6Q9Y6Q1 MIS12-201ENST00000381165 2505 ntAPPRIS P1 TSL 1 (best) BASIC4.21□□□□□ -1.74
CAPN6Q9Y6Q1 CACNB4-273ENST00000638091 4061 ntTSL 5 BASIC4.21□□□□□ -1.74
CAPN6Q9Y6Q1 CDH9-201ENST00000231021 3079 ntAPPRIS P1 TSL 1 (best) BASIC4.2□□□□□ -1.74
CAPN6Q9Y6Q1 FAM35A-201ENST00000298784 3402 ntAPPRIS P1 TSL 2 BASIC4.2□□□□□ -1.74
CAPN6Q9Y6Q1 Y_RNA.83-201ENST00000363005 113 ntBASIC4.2□□□□□ -1.74
CAPN6Q9Y6Q1 Y_RNA.123-201ENST00000363338 102 ntBASIC4.2□□□□□ -1.74
CAPN6Q9Y6Q1 GTSF1L-202ENST00000373005 459 ntAPPRIS ALT2 TSL 3 BASIC4.2□□□□□ -1.74
CAPN6Q9Y6Q1 Y_RNA.464-201ENST00000384282 110 ntBASIC4.2□□□□□ -1.74
CAPN6Q9Y6Q1 Y_RNA.541-201ENST00000384640 113 ntBASIC4.2□□□□□ -1.74
CAPN6Q9Y6Q1 TRAV34-201ENST00000390461 349 ntAPPRIS P1 BASIC4.2□□□□□ -1.74
CAPN6Q9Y6Q1 PCNPP3-201ENST00000393579 471 ntBASIC4.2□□□□□ -1.74
CAPN6Q9Y6Q1 RPL37P18-201ENST00000411602 243 ntBASIC4.2□□□□□ -1.74
CAPN6Q9Y6Q1 AL732292.1-201ENST00000426692 226 ntBASIC4.2□□□□□ -1.74
CAPN6Q9Y6Q1 AC006466.1-201ENST00000438721 289 ntBASIC4.2□□□□□ -1.74
CAPN6Q9Y6Q1 HMGB1P37-201ENST00000439613 609 ntBASIC4.2□□□□□ -1.74
CAPN6Q9Y6Q1 LINC01032-201ENST00000451690 276 ntTSL 5 BASIC4.2□□□□□ -1.74
CAPN6Q9Y6Q1 Y_RNA.644-201ENST00000459006 113 ntBASIC4.2□□□□□ -1.74
CAPN6Q9Y6Q1 AC092919.1-201ENST00000467896 229 ntTSL 2 BASIC4.2□□□□□ -1.74
CAPN6Q9Y6Q1 RN7SL604P-201ENST00000492589 296 ntBASIC4.2□□□□□ -1.74
CAPN6Q9Y6Q1 ZCCHC10-206ENST00000509008 608 ntAPPRIS ALT2 TSL 2 BASIC4.2□□□□□ -1.74
CAPN6Q9Y6Q1 RNU6-377P-201ENST00000515965 102 ntBASIC4.2□□□□□ -1.74
CAPN6Q9Y6Q1 Y_RNA.674-201ENST00000516362 113 ntBASIC4.2□□□□□ -1.74
CAPN6Q9Y6Q1 RNA5SP290-201ENST00000517133 127 ntBASIC4.2□□□□□ -1.74
CAPN6Q9Y6Q1 MAL2-206ENST00000522187 547 ntTSL 4 BASIC4.2□□□□□ -1.74
CAPN6Q9Y6Q1 AC215217.1-201ENST00000562162 347 ntTSL 3 BASIC4.2□□□□□ -1.74
CAPN6Q9Y6Q1 AC142086.4-201ENST00000568904 650 ntTSL 3 BASIC4.2□□□□□ -1.74
CAPN6Q9Y6Q1 MIR3910-1-201ENST00000580936 111 ntBASIC4.2□□□□□ -1.74
CAPN6Q9Y6Q1 CENPF-206ENST00000614578 528 ntTSL 5 BASIC4.2□□□□□ -1.74
CAPN6Q9Y6Q1 UBE2E2-207ENST00000628311 267 ntTSL 5 BASIC4.2□□□□□ -1.74
CAPN6Q9Y6Q1 GYPB-216ENST00000638448 363 ntAPPRIS P1 TSL 1 (best) BASIC4.2□□□□□ -1.74
CAPN6Q9Y6Q1 USP26-201ENST00000370832 3642 ntAPPRIS P1 BASIC4.2□□□□□ -1.74
CAPN6Q9Y6Q1 ATP7A-201ENST00000341514 8483 ntAPPRIS P1 TSL 1 (best) BASIC4.2□□□□□ -1.74
CAPN6Q9Y6Q1 LINC01239-202ENST00000436786 2347 ntTSL 2 BASIC4.2□□□□□ -1.74
CAPN6Q9Y6Q1 FAM197Y9-201ENST00000451062 2332 ntTSL 5 BASIC4.2□□□□□ -1.74
CAPN6Q9Y6Q1 PLCL1-203ENST00000437704 5979 ntTSL 1 (best) BASIC4.19□□□□□ -1.74
CAPN6Q9Y6Q1 ST7-221ENST00000465133 2155 ntTSL 5 BASIC4.19□□□□□ -1.74
CAPN6Q9Y6Q1 AKAP6-201ENST00000280979 15006 ntAPPRIS P1 TSL 1 (best) BASIC4.19□□□□□ -1.74
CAPN6Q9Y6Q1 ORC4-201ENST00000264169 6598 ntAPPRIS P1 TSL 5 BASIC4.19□□□□□ -1.74
CAPN6Q9Y6Q1 AL592437.2-201ENST00000421655 2434 ntBASIC4.19□□□□□ -1.74
CAPN6Q9Y6Q1 SNORA60-201ENST00000362396 134 ntBASIC4.19□□□□□ -1.74
CAPN6Q9Y6Q1 RNU6-545P-201ENST00000362681 104 ntBASIC4.19□□□□□ -1.74
CAPN6Q9Y6Q1 RNU6-378P-201ENST00000384324 107 ntBASIC4.19□□□□□ -1.74
CAPN6Q9Y6Q1 MTCO2P33-201ENST00000402100 465 ntBASIC4.19□□□□□ -1.74
CAPN6Q9Y6Q1 Y_RNA.602-201ENST00000410535 92 ntBASIC4.19□□□□□ -1.74
CAPN6Q9Y6Q1 HSPE1P12-201ENST00000412576 301 ntBASIC4.19□□□□□ -1.74
CAPN6Q9Y6Q1 AC092941.1-201ENST00000415940 427 ntTSL 5 BASIC4.19□□□□□ -1.74
CAPN6Q9Y6Q1 AC007560.1-201ENST00000426912 237 ntBASIC4.19□□□□□ -1.74
CAPN6Q9Y6Q1 ANXA2P1-201ENST00000505539 926 ntBASIC4.19□□□□□ -1.74
CAPN6Q9Y6Q1 ABCA17P-206ENST00000512848 467 ntTSL 2 BASIC4.19□□□□□ -1.74
CAPN6Q9Y6Q1 RNU6-1256P-201ENST00000516539 103 ntBASIC4.19□□□□□ -1.74
CAPN6Q9Y6Q1 SNORA31.19-201ENST00000517079 126 ntBASIC4.19□□□□□ -1.74
CAPN6Q9Y6Q1 AP004371.1-201ENST00000525240 214 ntBASIC4.19□□□□□ -1.74
CAPN6Q9Y6Q1 AC010186.2-204ENST00000537668 439 ntBASIC4.19□□□□□ -1.74
CAPN6Q9Y6Q1 GALP-203ENST00000590002 150 ntTSL 1 (best) BASIC4.19□□□□□ -1.74
CAPN6Q9Y6Q1 AC073657.2-201ENST00000605661 303 ntBASIC4.19□□□□□ -1.74
CAPN6Q9Y6Q1 Mico1.1-201ENST00000611698 204 ntBASIC4.19□□□□□ -1.74
CAPN6Q9Y6Q1 AC100827.5-201ENST00000615883 426 ntBASIC4.19□□□□□ -1.74
CAPN6Q9Y6Q1 U2.14-201ENST00000615943 113 ntBASIC4.19□□□□□ -1.74
CAPN6Q9Y6Q1 AC240442.1-201ENST00000616055 283 ntBASIC4.19□□□□□ -1.74
CAPN6Q9Y6Q1 GLMN-201ENST00000370360 1995 ntAPPRIS P1 TSL 1 (best) BASIC4.19□□□□□ -1.74
CAPN6Q9Y6Q1 RAD17-208ENST00000380774 2117 ntAPPRIS P1 TSL 1 (best) BASIC4.19□□□□□ -1.74
CAPN6Q9Y6Q1 AC004925.1-201ENST00000624256 2706 ntBASIC4.19□□□□□ -1.74
CAPN6Q9Y6Q1 MBD5-202ENST00000407073 9512 ntTSL 1 (best) BASIC4.19□□□□□ -1.74
CAPN6Q9Y6Q1 C12orf60-201ENST00000330828 1684 ntAPPRIS P1 TSL 1 (best) BASIC4.19□□□□□ -1.74
CAPN6Q9Y6Q1 CCPG1-202ENST00000425574 1945 ntTSL 2 BASIC4.19□□□□□ -1.74
CAPN6Q9Y6Q1 LRIF1-203ENST00000494675 1912 ntAPPRIS ALT2 TSL 2 BASIC4.19□□□□□ -1.74
Retrieved 100 of 98,524 protein–RNA pairs in 11.8 ms